RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 NTM-AS1Q6ZSK4 140 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 MIR17HGQ75NE6 70 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 OR5C1Q8NGR4 320 aa2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 MRPS26Q9BYN8 205 aaKnown RBP2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 RSL24D1Q9UHA3 163 aaKnown RBP2.12□□□□□ -2.07
PDLIM5-218ENST00000513341 IGHV1-24A0A0C4DH33 117 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 TRBV6-1A0A0K0K1D8 114 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 LOC107984640A0A0U1RRK4 108 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 LOC105371267A0A1B0GV96 52 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 C9orf170A2RU37 121 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 OR7C2O60412 319 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 CST7O76096 145 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 ARMS2P0C7Q2 107 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 PVALBP20472 110 aaPredicted RBP2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 S100A1P23297 94 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 SULT1A1P50225 295 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 TAS2R45P59539 299 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 AP3S2P59780 193 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 UBE2G2P60604 165 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 EIF5AP63241 154 aaKnown RBP2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 BAXQ07812 192 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 IAH1Q2TAA2 248 aaPredicted RBP2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 C6orf226Q5I0X4 101 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 GCSAMLQ5JQS6 135 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM74A4Q5TZK3 123 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 CLPSL2Q6UWE3 100 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 GOLT1AQ6ZVE7 132 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 C20orf203Q8NBC4 194 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 ISOC2Q96AB3 205 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 HYLS1Q96M11 299 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 AQP10Q96PS8 301 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 DERL1Q9BUN8 251 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 NPCDR1Q9BY65 106 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 MED28Q9H204 178 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 RPP21Q9H633 154 aaKnown RBP2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 KCNIP2Q9NS61 270 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 GSKIPQ9P0R6 139 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 PHLDA3Q9Y5J5 127 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
PDLIM5-218ENST00000513341 C17orf112F2Z3M2 114 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 F6UZH7 168 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 RGS5O15539 181 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 TPT1P13693 172 aaKnown RBP2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 FGF7P21781 194 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 RAB5CP51148 216 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 NCS1P62166 190 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 UBE2L3P68036 154 aaKnown RBP2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 SYCNQ0VAF6 134 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 KHDC3LQ587J8 217 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 C9orf116Q5BN46 136 aaPredicted RBP2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 SLC51BQ86UW2 128 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 ZFP82Q8N141 532 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 MCFD2Q8NI22 146 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 PSG8Q9UQ74 426 aa2.1□□□□□ -2.07
PDLIM5-218ENST00000513341 IGLV4-60A0A075B6I1 120 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 IGHV1-58A0A0C4DH39 117 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 A0A1B0GW15 77 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 FAM168BA1KXE4 195 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 B4DEV8 164 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 KRBOX1C9JBD0 128 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 SNAPINO95295 136 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 TCRAP04437 139 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 SULT1A2P50226 295 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 TMBIM6P55061 237 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 FLI1Q01543 452 aaPredicted RBP2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 PRNTQ86SH4 94 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 TOMM5Q8N4H5 51 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 LINC00337Q8N6G1 96 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 TMEM252Q8N6L7 170 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 C5orf17Q8NAS9 161 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 CARD19Q96LW7 228 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 C11orf1Q9H5F2 150 aa2.09□□□□□ -2.07
PDLIM5-218ENST00000513341 USH2AO75445 5202 aa2.09□□□□□ -2.08
PDLIM5-218ENST00000513341 IGLV4-69A0A075B6H9 119 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 UBE2L5PA0A1B0GUS4 154 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 TEX46H3BTG2 121 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 H3BVH4 76 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 M0R381 172 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 ZNF861PO60384 105 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 NDUFB6O95139 128 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 RPL12P30050 165 aaKnown RBP2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 ZNF56Q15929 161 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 C5orf47Q569G3 176 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 EIF5AL1Q6IS14 154 aaKnown RBP2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 PP632Q6XCG6 107 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 LINC00173Q6ZV60 143 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 PHF5AQ7RTV0 110 aaKnown RBP2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 CHCHD10Q8WYQ3 142 aaPredicted RBP2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 PGLYRP4Q96LB8 373 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 TMEM243Q9BU79 118 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 WDR61Q9GZS3 305 aaKnown RBP2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 NAA50Q9GZZ1 169 aaKnown RBP2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 PPDPFQ9H3Y8 114 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 WFDC1Q9HC57 220 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 BATF3Q9NR55 127 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 EPDR1Q9UM22 224 aa2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 CSDC2Q9Y534 153 aaKnown RBP2.08□□□□□ -2.08
PDLIM5-218ENST00000513341 A0A1B0GVG6 124 aa2.07□□□□□ -2.08
PDLIM5-218ENST00000513341 NAP1L6A6NFF2 107 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms