RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 NUP35Q8NFH5 326 aa9.68□□□□□ -0.86
COL1A1-213ENST00000511732 ISOC2Q96AB3 205 aa9.68□□□□□ -0.86
COL1A1-213ENST00000511732 TRBV27A0A0K0K1C4 114 aa9.67□□□□□ -0.86
COL1A1-213ENST00000511732 C9JQL5 133 aa9.67□□□□□ -0.86
COL1A1-213ENST00000511732 MRAP2Q96G30 205 aa9.67□□□□□ -0.86
COL1A1-213ENST00000511732 BTF3L4Q96K17 158 aa9.67□□□□□ -0.86
COL1A1-213ENST00000511732 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
COL1A1-213ENST00000511732 PLAC8Q9NZF1 115 aa9.67□□□□□ -0.86
COL1A1-213ENST00000511732 CCL25O15444 150 aa9.66□□□□□ -0.86
COL1A1-213ENST00000511732 RPL23P62829 140 aaKnown RBP9.66□□□□□ -0.86
COL1A1-213ENST00000511732 SERTAD4-AS1Q5TG53 156 aa9.66□□□□□ -0.86
COL1A1-213ENST00000511732 NRACQ8N912 160 aa9.66□□□□□ -0.86
COL1A1-213ENST00000511732 LINC00526Q96FQ7 95 aa9.66□□□□□ -0.86
COL1A1-213ENST00000511732 TMEM101Q96IK0 257 aa9.66□□□□□ -0.86
COL1A1-213ENST00000511732 HMCN2Q8NDA2 5059 aa9.65□□□□□ -0.86
COL1A1-213ENST00000511732 IGKV2-24A0A0C4DH68 120 aa9.65□□□□□ -0.86
COL1A1-213ENST00000511732 RIGQ13278 110 aa9.65□□□□□ -0.86
COL1A1-213ENST00000511732 MRPL52Q86TS9 123 aaKnown RBP9.65□□□□□ -0.86
COL1A1-213ENST00000511732 C7orf77A4D0Y5 90 aa9.64□□□□□ -0.87
COL1A1-213ENST00000511732 PHOX2AO14813 284 aa9.64□□□□□ -0.87
COL1A1-213ENST00000511732 MT1HL1P0DM35 61 aa9.64□□□□□ -0.87
COL1A1-213ENST00000511732 SRSF3P84103 164 aaKnown RBP9.64□□□□□ -0.87
COL1A1-213ENST00000511732 TMEM241Q24JQ0 296 aa9.64□□□□□ -0.87
COL1A1-213ENST00000511732 MAJINQ3KP22 176 aa9.64□□□□□ -0.87
COL1A1-213ENST00000511732 ZNF664Q8N3J9 261 aa9.64□□□□□ -0.87
COL1A1-213ENST00000511732 A0A096LNI7 61 aa9.63□□□□□ -0.87
COL1A1-213ENST00000511732 VCYO14598 125 aa9.63□□□□□ -0.87
COL1A1-213ENST00000511732 Q6ZRU5 148 aa9.63□□□□□ -0.87
COL1A1-213ENST00000511732 NAT8BQ9UHF3 227 aa9.63□□□□□ -0.87
COL1A1-213ENST00000511732 IGHV1-58A0A0C4DH39 117 aa9.62□□□□□ -0.87
COL1A1-213ENST00000511732 SUMO2P61956 95 aaKnown RBP9.62□□□□□ -0.87
COL1A1-213ENST00000511732 SS18Q15532 418 aa9.62□□□□□ -0.87
COL1A1-213ENST00000511732 ADIRFQ15847 76 aa9.62□□□□□ -0.87
COL1A1-213ENST00000511732 MRPL51Q4U2R6 128 aaKnown RBP9.62□□□□□ -0.87
COL1A1-213ENST00000511732 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
COL1A1-213ENST00000511732 CD164L2Q6UWJ8 174 aa9.62□□□□□ -0.87
COL1A1-213ENST00000511732 STPG4Q8N801 248 aa9.62□□□□□ -0.87
COL1A1-213ENST00000511732 FAM104BQ5XKR9 115 aa9.61□□□□□ -0.87
COL1A1-213ENST00000511732 NAT8Q9UHE5 227 aa9.61□□□□□ -0.87
COL1A1-213ENST00000511732 UBE2D4Q9Y2X8 147 aa9.61□□□□□ -0.87
COL1A1-213ENST00000511732 SMIM27A0A1W2PRY6 76 aa9.6□□□□□ -0.87
COL1A1-213ENST00000511732 FCER1GP30273 86 aa9.6□□□□□ -0.87
COL1A1-213ENST00000511732 RNASE13Q5GAN3 156 aaKnown RBP9.6□□□□□ -0.87
COL1A1-213ENST00000511732 CAMPP49913 170 aa9.59□□□□□ -0.87
COL1A1-213ENST00000511732 C7orf33Q8WU49 177 aa9.59□□□□□ -0.87
COL1A1-213ENST00000511732 CARD19Q96LW7 228 aa9.59□□□□□ -0.87
COL1A1-213ENST00000511732 CSDC2Q9Y534 153 aaKnown RBP9.59□□□□□ -0.87
COL1A1-213ENST00000511732 PPP1R17O96001 155 aa9.58□□□□□ -0.88
COL1A1-213ENST00000511732 KIR2DL4Q99706 377 aa9.58□□□□□ -0.88
COL1A1-213ENST00000511732 PLA2G2DQ9UNK4 145 aa9.58□□□□□ -0.88
COL1A1-213ENST00000511732 TNXBP22105 4242 aa9.57□□□□□ -0.88
COL1A1-213ENST00000511732 C1orf196B1AJZ1 125 aa9.57□□□□□ -0.88
COL1A1-213ENST00000511732 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
COL1A1-213ENST00000511732 SYCNQ0VAF6 134 aa9.57□□□□□ -0.88
COL1A1-213ENST00000511732 Q6ZUT4 128 aa9.57□□□□□ -0.88
COL1A1-213ENST00000511732 IGLV4-69A0A075B6H9 119 aa9.56□□□□□ -0.88
COL1A1-213ENST00000511732 TRBV24-1A0A075B6N3 115 aa9.56□□□□□ -0.88
COL1A1-213ENST00000511732 LINC00862A6NCI5 91 aa9.56□□□□□ -0.88
COL1A1-213ENST00000511732 PPP1R2P9O14990 202 aa9.56□□□□□ -0.88
COL1A1-213ENST00000511732 PRR3P79522 188 aaKnown RBP9.56□□□□□ -0.88
COL1A1-213ENST00000511732 PEA15Q15121 130 aa9.56□□□□□ -0.88
COL1A1-213ENST00000511732 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
COL1A1-213ENST00000511732 TRAV13-1A0A0B4J241 112 aa9.55□□□□□ -0.88
COL1A1-213ENST00000511732 CKS2P33552 79 aa9.55□□□□□ -0.88
COL1A1-213ENST00000511732 C20orf78Q9BR46 151 aa9.55□□□□□ -0.88
COL1A1-213ENST00000511732 COX7A2LO14548 114 aa9.54□□□□□ -0.88
COL1A1-213ENST00000511732 TNFRSF6BO95407 300 aa9.54□□□□□ -0.88
COL1A1-213ENST00000511732 RPL39P62891 51 aaKnown RBP9.54□□□□□ -0.88
COL1A1-213ENST00000511732 RPL32P62910 135 aaKnown RBP9.54□□□□□ -0.88
COL1A1-213ENST00000511732 MRPL54Q6P161 138 aaKnown RBP9.54□□□□□ -0.88
COL1A1-213ENST00000511732 C5orf38Q86SI9 138 aa9.54□□□□□ -0.88
COL1A1-213ENST00000511732 TIMM21Q9BVV7 248 aa9.54□□□□□ -0.88
COL1A1-213ENST00000511732 SMDT1Q9H4I9 107 aa9.54□□□□□ -0.88
COL1A1-213ENST00000511732 LINC00474Q9P2X8 69 aa9.54□□□□□ -0.88
COL1A1-213ENST00000511732 A0A1B0GW15 77 aa9.53□□□□□ -0.88
COL1A1-213ENST00000511732 A0A1B0GXF2 115 aa9.53□□□□□ -0.88
COL1A1-213ENST00000511732 D6R8Y8 96 aa9.53□□□□□ -0.88
COL1A1-213ENST00000511732 MALP21145 153 aa9.53□□□□□ -0.88
COL1A1-213ENST00000511732 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
COL1A1-213ENST00000511732 NPYP01303 97 aa9.52□□□□□ -0.89
COL1A1-213ENST00000511732 PTTG1IPP53801 180 aa9.52□□□□□ -0.89
COL1A1-213ENST00000511732 GAGE2BQ13066 116 aa9.52□□□□□ -0.89
COL1A1-213ENST00000511732 TMEM18Q96B42 140 aa9.52□□□□□ -0.89
COL1A1-213ENST00000511732 OPRPNQ99935 248 aaPredicted RBP9.52□□□□□ -0.89
COL1A1-213ENST00000511732 SMIM2Q9BVW6 85 aa9.52□□□□□ -0.89
COL1A1-213ENST00000511732 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
COL1A1-213ENST00000511732 UBR4Q5T4S7 5183 aa9.51□□□□□ -0.89
COL1A1-213ENST00000511732 A0A1W2PNN7 141 aa9.51□□□□□ -0.89
COL1A1-213ENST00000511732 HBBP68871 147 aa9.51□□□□□ -0.89
COL1A1-213ENST00000511732 CAMK2N2Q96S95 79 aa9.51□□□□□ -0.89
COL1A1-213ENST00000511732 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
COL1A1-213ENST00000511732 TCAPO15273 167 aa9.5□□□□□ -0.89
COL1A1-213ENST00000511732 F8W036 122 aa9.49□□□□□ -0.89
COL1A1-213ENST00000511732 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.49□□□□□ -0.89
COL1A1-213ENST00000511732 C2orf48Q96LS8 159 aa9.49□□□□□ -0.89
COL1A1-213ENST00000511732 LINC01600Q96MT4 127 aa9.49□□□□□ -0.89
COL1A1-213ENST00000511732 IGHV3OR16-9A0A0B4J2B5 98 aa9.48□□□□□ -0.89
COL1A1-213ENST00000511732 A0A0J9YXV3 536 aa9.48□□□□□ -0.89
COL1A1-213ENST00000511732 APOMO95445 188 aa9.48□□□□□ -0.89
COL1A1-213ENST00000511732 S100A8P05109 93 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms