RNA–Protein interactions for RNA: ENST00000510442.1

SUB1-207, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-207ENST00000510442 C20orf203Q8NBC4 194 aa12.73□□□□□ -0.37
SUB1-207ENST00000510442 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
SUB1-207ENST00000510442 IGLV10-54A0A075B6I4 117 aa12.72□□□□□ -0.37
SUB1-207ENST00000510442 CKS2P33552 79 aa12.71□□□□□ -0.37
SUB1-207ENST00000510442 RPL37AP61513 92 aaKnown RBP12.71□□□□□ -0.37
SUB1-207ENST00000510442 MRPL51Q4U2R6 128 aaKnown RBP12.71□□□□□ -0.37
SUB1-207ENST00000510442 SDIM1Q6ZPB5 146 aa12.71□□□□□ -0.37
SUB1-207ENST00000510442 IGLV4-60A0A075B6I1 120 aa12.7□□□□□ -0.38
SUB1-207ENST00000510442 TRAV26-2A0A0B4J265 109 aa12.7□□□□□ -0.38
SUB1-207ENST00000510442 ATP6V1G1O75348 118 aa12.7□□□□□ -0.38
SUB1-207ENST00000510442 ORMDL3Q8N138 153 aa12.7□□□□□ -0.38
SUB1-207ENST00000510442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.7□□□□□ -0.38
SUB1-207ENST00000510442 TRBV6-5A0A0K0K1A5 114 aa12.69□□□□□ -0.38
SUB1-207ENST00000510442 PHOX2AO14813 284 aa12.69□□□□□ -0.38
SUB1-207ENST00000510442 SERTAD4-AS1Q5TG53 156 aa12.69□□□□□ -0.38
SUB1-207ENST00000510442 TMEM136Q6ZRR5 245 aa12.69□□□□□ -0.38
SUB1-207ENST00000510442 LAMTOR2Q9Y2Q5 125 aa12.69□□□□□ -0.38
SUB1-207ENST00000510442 TGIF2-C20orf24A0A0A6YYL0 155 aa12.68□□□□□ -0.38
SUB1-207ENST00000510442 CNBPP62633 177 aaKnown RBP12.68□□□□□ -0.38
SUB1-207ENST00000510442 ST20Q9HBF5 79 aa12.68□□□□□ -0.38
SUB1-207ENST00000510442 hDV102S1A0JD36 115 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 PANO1I0J062 215 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 UBE2L6O14933 153 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 APCSP02743 223 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 COTL1Q14019 142 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 CBLN2Q8IUK8 224 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 C20orf78Q9BR46 151 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 FAT3Q8TDW7 4589 aa12.67□□□□□ -0.38
SUB1-207ENST00000510442 D6R8Y8 96 aa12.66□□□□□ -0.38
SUB1-207ENST00000510442 AMTP48728 403 aa12.66□□□□□ -0.38
SUB1-207ENST00000510442 YPEL4Q96NS1 127 aa12.66□□□□□ -0.38
SUB1-207ENST00000510442 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
SUB1-207ENST00000510442 AP5S1Q9NUS5 200 aa12.65□□□□□ -0.38
SUB1-207ENST00000510442 PKHD1L1Q86WI1 4243 aa12.65□□□□□ -0.38
SUB1-207ENST00000510442 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.64□□□□□ -0.39
SUB1-207ENST00000510442 SDHAF1A6NFY7 115 aa12.64□□□□□ -0.39
SUB1-207ENST00000510442 NCR2O95944 276 aa12.64□□□□□ -0.39
SUB1-207ENST00000510442 SUMO2P61956 95 aaKnown RBP12.64□□□□□ -0.39
SUB1-207ENST00000510442 CIRBPQ14011 172 aaKnown RBP12.64□□□□□ -0.39
SUB1-207ENST00000510442 PRELID3AQ96N28 172 aa12.64□□□□□ -0.39
SUB1-207ENST00000510442 TRAPPC1Q9Y5R8 145 aa12.64□□□□□ -0.39
SUB1-207ENST00000510442 IGHV3-64A0A075B6Q5 118 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 SMKR1H3BMG3 65 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 I3L3M4 83 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 VCYO14598 125 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 TCAPO15273 167 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 SLPIP03973 132 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
SUB1-207ENST00000510442 RPL32P62910 135 aaKnown RBP12.63□□□□□ -0.39
SUB1-207ENST00000510442 NRACQ8N912 160 aa12.63□□□□□ -0.39
SUB1-207ENST00000510442 MRPL18Q9H0U6 180 aaKnown RBP12.63□□□□□ -0.39
SUB1-207ENST00000510442 PMCHP20382 165 aa12.62□□□□□ -0.39
SUB1-207ENST00000510442 RPS10P46783 165 aaKnown RBP12.62□□□□□ -0.39
SUB1-207ENST00000510442 FABP9Q0Z7S8 132 aa12.62□□□□□ -0.39
SUB1-207ENST00000510442 DPH3Q96FX2 82 aa12.62□□□□□ -0.39
SUB1-207ENST00000510442 TRBV27A0A0K0K1C4 114 aa12.61□□□□□ -0.39
SUB1-207ENST00000510442 POLR2KP53803 58 aaKnown RBP12.61□□□□□ -0.39
SUB1-207ENST00000510442 KIR2DL4Q99706 377 aa12.61□□□□□ -0.39
SUB1-207ENST00000510442 PRSS47A8MTI9 375 aa12.6□□□□□ -0.39
SUB1-207ENST00000510442 GAS8-AS1O95177 125 aa12.6□□□□□ -0.39
SUB1-207ENST00000510442 CFAP161Q6P656 301 aa12.6□□□□□ -0.39
SUB1-207ENST00000510442 MAP1LC3AQ9H492 121 aa12.6□□□□□ -0.39
SUB1-207ENST00000510442 GAGE12HA6NDE8 117 aa12.59□□□□□ -0.39
SUB1-207ENST00000510442 NPYP01303 97 aa12.59□□□□□ -0.39
SUB1-207ENST00000510442 AMMECR1LQ6DCA0 310 aa12.58□□□□□ -0.4
SUB1-207ENST00000510442 A0A087WYN8 130 aa12.57□□□□□ -0.4
SUB1-207ENST00000510442 IGKV3OR2-268A0A0C4DH90 116 aa12.57□□□□□ -0.4
SUB1-207ENST00000510442 COLCA2A8K830 154 aa12.57□□□□□ -0.4
SUB1-207ENST00000510442 H7C423 109 aa12.57□□□□□ -0.4
SUB1-207ENST00000510442 FCER1GP30273 86 aa12.57□□□□□ -0.4
SUB1-207ENST00000510442 C15orf56Q8N910 161 aa12.57□□□□□ -0.4
SUB1-207ENST00000510442 SMIM2Q9BVW6 85 aa12.57□□□□□ -0.4
SUB1-207ENST00000510442 K7EMI3 77 aa12.56□□□□□ -0.4
SUB1-207ENST00000510442 CHTF8P0CG12 524 aa12.56□□□□□ -0.4
SUB1-207ENST00000510442 RAB5AP20339 215 aa12.56□□□□□ -0.4
SUB1-207ENST00000510442 KIAA1644Q3SXP7 199 aa12.56□□□□□ -0.4
SUB1-207ENST00000510442 SPACA4Q8TDM5 124 aa12.56□□□□□ -0.4
SUB1-207ENST00000510442 ALKBH7Q9BT30 221 aaPredicted RBP12.56□□□□□ -0.4
SUB1-207ENST00000510442 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
SUB1-207ENST00000510442 SCO1O75880 301 aa12.55□□□□□ -0.4
SUB1-207ENST00000510442 SMAGPQ0VAQ4 97 aa12.55□□□□□ -0.4
SUB1-207ENST00000510442 RNASEKQ6P5S7 137 aaKnown RBP12.55□□□□□ -0.4
SUB1-207ENST00000510442 Q6ZRU5 148 aa12.55□□□□□ -0.4
SUB1-207ENST00000510442 CHCHD10Q8WYQ3 142 aaPredicted RBP12.55□□□□□ -0.4
SUB1-207ENST00000510442 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.54□□□□□ -0.4
SUB1-207ENST00000510442 IGKV2-29A2NJV5 120 aaPredicted RBP12.54□□□□□ -0.4
SUB1-207ENST00000510442 HMCN2Q8NDA2 5059 aa12.53□□□□□ -0.4
SUB1-207ENST00000510442 FGF6P10767 208 aa12.53□□□□□ -0.4
SUB1-207ENST00000510442 Q8N8P6 123 aa12.53□□□□□ -0.4
SUB1-207ENST00000510442 TMEM18Q96B42 140 aa12.53□□□□□ -0.4
SUB1-207ENST00000510442 PLAC8Q9NZF1 115 aa12.53□□□□□ -0.4
SUB1-207ENST00000510442 PLA2G2DQ9UNK4 145 aa12.53□□□□□ -0.4
SUB1-207ENST00000510442 TSHBP01222 138 aa12.52□□□□□ -0.41
SUB1-207ENST00000510442 G0S2P27469 103 aa12.52□□□□□ -0.41
SUB1-207ENST00000510442 COX6A2Q02221 97 aa12.52□□□□□ -0.41
SUB1-207ENST00000510442 HIGD2BQ4VC39 106 aa12.52□□□□□ -0.41
SUB1-207ENST00000510442 PRSS3P2Q8NHM4 247 aa12.52□□□□□ -0.41
SUB1-207ENST00000510442 LOC389332A0A1B0GUA5 103 aa12.51□□□□□ -0.41
SUB1-207ENST00000510442 ZNF25P17030 456 aaPredicted RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms