RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 AP5S1Q9NUS5 200 aa13.89□□□□□ -0.19
UBE2D3-229ENST00000510129 FAM30AQ9NZY2 134 aa13.89□□□□□ -0.19
UBE2D3-229ENST00000510129 CSDC2Q9Y534 153 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-229ENST00000510129 IGKV3OR2-268A0A0C4DH90 116 aa13.87□□□□□ -0.19
UBE2D3-229ENST00000510129 hDV102S1A0JD36 115 aa13.87□□□□□ -0.19
UBE2D3-229ENST00000510129 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-229ENST00000510129 GAGE12HA6NDE8 117 aa13.86□□□□□ -0.19
UBE2D3-229ENST00000510129 CNBPP62633 177 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-229ENST00000510129 C9orf163Q8N9P6 203 aa13.86□□□□□ -0.19
UBE2D3-229ENST00000510129 CHCHD10Q8WYQ3 142 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-229ENST00000510129 APOBP04114 4563 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-229ENST00000510129 HSPG2P98160 4391 aa13.85□□□□□ -0.19
UBE2D3-229ENST00000510129 TNFRSF6BO95407 300 aa13.85□□□□□ -0.19
UBE2D3-229ENST00000510129 SMR3BP02814 79 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-229ENST00000510129 LINC01620Q4KN68 170 aa13.85□□□□□ -0.19
UBE2D3-229ENST00000510129 D6R8Y8 96 aa13.84□□□□□ -0.19
UBE2D3-229ENST00000510129 CCL25O15444 150 aa13.84□□□□□ -0.19
UBE2D3-229ENST00000510129 SS18Q15532 418 aa13.84□□□□□ -0.19
UBE2D3-229ENST00000510129 ORMDL3Q8N138 153 aa13.84□□□□□ -0.19
UBE2D3-229ENST00000510129 ZNF664Q8N3J9 261 aa13.84□□□□□ -0.19
UBE2D3-229ENST00000510129 CHAC1Q9BUX1 264 aa13.84□□□□□ -0.19
UBE2D3-229ENST00000510129 CDC42SE2Q9NRR3 84 aa13.84□□□□□ -0.19
UBE2D3-229ENST00000510129 TIMM21Q9BVV7 248 aa13.83□□□□□ -0.2
UBE2D3-229ENST00000510129 LINC00959A0A1B0GUT2 108 aa13.82□□□□□ -0.2
UBE2D3-229ENST00000510129 HAMPP81172 84 aa13.82□□□□□ -0.2
UBE2D3-229ENST00000510129 IMMP2LQ96T52 175 aa13.82□□□□□ -0.2
UBE2D3-229ENST00000510129 SMIM2Q9BVW6 85 aa13.82□□□□□ -0.2
UBE2D3-229ENST00000510129 LAMTOR2Q9Y2Q5 125 aa13.82□□□□□ -0.2
UBE2D3-229ENST00000510129 PLA2G1BP04054 148 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-229ENST00000510129 IFITM2Q01629 132 aa13.81□□□□□ -0.2
UBE2D3-229ENST00000510129 SCXQ7RTU7 201 aa13.81□□□□□ -0.2
UBE2D3-229ENST00000510129 TMEM136Q6ZRR5 245 aa13.8□□□□□ -0.2
UBE2D3-229ENST00000510129 UBE2D4Q9Y2X8 147 aa13.8□□□□□ -0.2
UBE2D3-229ENST00000510129 TMEM218A2RU14 115 aa13.79□□□□□ -0.2
UBE2D3-229ENST00000510129 C1orf196B1AJZ1 125 aa13.79□□□□□ -0.2
UBE2D3-229ENST00000510129 INAFM2P0DMQ5 153 aa13.79□□□□□ -0.2
UBE2D3-229ENST00000510129 FOXI1Q12951 378 aa13.79□□□□□ -0.2
UBE2D3-229ENST00000510129 CTDSP1Q9GZU7 261 aa13.79□□□□□ -0.2
UBE2D3-229ENST00000510129 IGHV3-64A0A075B6Q5 118 aa13.78□□□□□ -0.2
UBE2D3-229ENST00000510129 NPYP01303 97 aa13.78□□□□□ -0.2
UBE2D3-229ENST00000510129 XCL1P47992 114 aa13.78□□□□□ -0.2
UBE2D3-229ENST00000510129 CD164L2Q6UWJ8 174 aa13.78□□□□□ -0.2
UBE2D3-229ENST00000510129 C15orf56Q8N910 161 aa13.78□□□□□ -0.2
UBE2D3-229ENST00000510129 PRELID3AQ96N28 172 aa13.78□□□□□ -0.2
UBE2D3-229ENST00000510129 GVQW2A0A096LPI5 108 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-229ENST00000510129 RAB5AP20339 215 aa13.77□□□□□ -0.21
UBE2D3-229ENST00000510129 IGHV1-58A0A0C4DH39 117 aa13.76□□□□□ -0.21
UBE2D3-229ENST00000510129 LINC00528Q8N1L1 170 aa13.76□□□□□ -0.21
UBE2D3-229ENST00000510129 CIRBP-AS1Q8TBR5 109 aa13.76□□□□□ -0.21
UBE2D3-229ENST00000510129 SEC11CQ9BY50 192 aa13.76□□□□□ -0.21
UBE2D3-229ENST00000510129 SPANXA1Q9NS26 97 aa13.76□□□□□ -0.21
UBE2D3-229ENST00000510129 PKIGQ9Y2B9 76 aa13.76□□□□□ -0.21
UBE2D3-229ENST00000510129 TRAV9-1A0A075B6T8 112 aa13.75□□□□□ -0.21
UBE2D3-229ENST00000510129 SDIM1Q6ZPB5 146 aa13.75□□□□□ -0.21
UBE2D3-229ENST00000510129 ABCA13Q86UQ4 5058 aa13.75□□□□□ -0.21
UBE2D3-229ENST00000510129 PRSS47A8MTI9 375 aa13.74□□□□□ -0.21
UBE2D3-229ENST00000510129 MAP1LC3AQ9H492 121 aa13.74□□□□□ -0.21
UBE2D3-229ENST00000510129 ADCYAP1P18509 176 aa13.73□□□□□ -0.21
UBE2D3-229ENST00000510129 COMMD7Q86VX2 200 aa13.72□□□□□ -0.21
UBE2D3-229ENST00000510129 K7EMI3 77 aa13.71□□□□□ -0.21
UBE2D3-229ENST00000510129 S100PP25815 95 aa13.71□□□□□ -0.21
UBE2D3-229ENST00000510129 MRPS36P82909 103 aaKnown RBP13.71□□□□□ -0.21
UBE2D3-229ENST00000510129 HIGD2BQ4VC39 106 aa13.71□□□□□ -0.21
UBE2D3-229ENST00000510129 SLPIP03973 132 aa13.7□□□□□ -0.22
UBE2D3-229ENST00000510129 TRAV13-1A0A0B4J241 112 aa13.69□□□□□ -0.22
UBE2D3-229ENST00000510129 ZNF561-AS1K7EIQ3 104 aa13.69□□□□□ -0.22
UBE2D3-229ENST00000510129 COX7A2LO14548 114 aa13.69□□□□□ -0.22
UBE2D3-229ENST00000510129 MALP21145 153 aa13.69□□□□□ -0.22
UBE2D3-229ENST00000510129 IFI27P40305 119 aaPredicted RBP13.69□□□□□ -0.22
UBE2D3-229ENST00000510129 CIRBPQ14011 172 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-229ENST00000510129 Q6ZUT4 128 aa13.69□□□□□ -0.22
UBE2D3-229ENST00000510129 RPL39P62891 51 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-229ENST00000510129 PYGO1Q9Y3Y4 419 aa13.68□□□□□ -0.22
UBE2D3-229ENST00000510129 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.68□□□□□ -0.22
UBE2D3-229ENST00000510129 APOMO95445 188 aa13.67□□□□□ -0.22
UBE2D3-229ENST00000510129 G0S2P27469 103 aa13.67□□□□□ -0.22
UBE2D3-229ENST00000510129 Q8N8P6 123 aa13.67□□□□□ -0.22
UBE2D3-229ENST00000510129 DPH3Q96FX2 82 aa13.67□□□□□ -0.22
UBE2D3-229ENST00000510129 COX19Q49B96 90 aa13.66□□□□□ -0.22
UBE2D3-229ENST00000510129 ORMDL2Q53FV1 153 aa13.66□□□□□ -0.22
UBE2D3-229ENST00000510129 RNASE13Q5GAN3 156 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-229ENST00000510129 NXT2Q9NPJ8 142 aaKnown RBP13.66□□□□□ -0.22
UBE2D3-229ENST00000510129 DNAH8Q96JB1 4490 aa13.66□□□□□ -0.22
UBE2D3-229ENST00000510129 LOC389332A0A1B0GUA5 103 aa13.65□□□□□ -0.22
UBE2D3-229ENST00000510129 RHEBQ15382 184 aa13.65□□□□□ -0.22
UBE2D3-229ENST00000510129 LINC00474Q9P2X8 69 aa13.65□□□□□ -0.22
UBE2D3-229ENST00000510129 C10orf91Q5T1B1 145 aa13.64□□□□□ -0.23
UBE2D3-229ENST00000510129 IFITM10A6NMD0 228 aa13.63□□□□□ -0.23
UBE2D3-229ENST00000510129 NPSP0C0P6 89 aa13.63□□□□□ -0.23
UBE2D3-229ENST00000510129 COX6A2Q02221 97 aa13.63□□□□□ -0.23
UBE2D3-229ENST00000510129 SPACA4Q8TDM5 124 aa13.63□□□□□ -0.23
UBE2D3-229ENST00000510129 CARD19Q96LW7 228 aa13.63□□□□□ -0.23
UBE2D3-229ENST00000510129 CYSLTR1Q9Y271 337 aa13.63□□□□□ -0.23
UBE2D3-229ENST00000510129 CARHSP1Q9Y2V2 147 aaKnown RBP13.63□□□□□ -0.23
UBE2D3-229ENST00000510129 SYCNQ0VAF6 134 aa13.62□□□□□ -0.23
UBE2D3-229ENST00000510129 TMEM141Q96I45 108 aa13.61□□□□□ -0.23
UBE2D3-229ENST00000510129 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
UBE2D3-229ENST00000510129 Q6ZN92 141 aa13.6□□□□□ -0.23
UBE2D3-229ENST00000510129 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
UBE2D3-229ENST00000510129 C2orf48Q96LS8 159 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 216.8 ms