RNA–Protein interactions for RNA: ENST00000508940.1

PROM1-209, Transcript of prominin 1, humanhuman

TSL 4

Gene PROM1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-209ENST00000508940 C20orf78Q9BR46 151 aa15.78■□□□□ 0.12
PROM1-209ENST00000508940 A0A1B0GXF2 115 aa15.77■□□□□ 0.12
PROM1-209ENST00000508940 MT-ND4LP03901 98 aa15.77■□□□□ 0.12
PROM1-209ENST00000508940 MRPL52Q86TS9 123 aaKnown RBP15.77■□□□□ 0.12
PROM1-209ENST00000508940 ATP5L2Q7Z4Y8 100 aa15.76■□□□□ 0.11
PROM1-209ENST00000508940 ANAPC16Q96DE5 110 aa15.76■□□□□ 0.11
PROM1-209ENST00000508940 TRBV24-1A0A075B6N3 115 aa15.75■□□□□ 0.11
PROM1-209ENST00000508940 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.75■□□□□ 0.11
PROM1-209ENST00000508940 D6R8Y8 96 aa15.75■□□□□ 0.11
PROM1-209ENST00000508940 TNFRSF6BO95407 300 aa15.75■□□□□ 0.11
PROM1-209ENST00000508940 PLA2G1BP04054 148 aaKnown RBP15.75■□□□□ 0.11
PROM1-209ENST00000508940 CNBPP62633 177 aaKnown RBP15.75■□□□□ 0.11
PROM1-209ENST00000508940 SS18Q15532 418 aa15.75■□□□□ 0.11
PROM1-209ENST00000508940 LINC00528Q8N1L1 170 aa15.75■□□□□ 0.11
PROM1-209ENST00000508940 TMEM18Q96B42 140 aa15.75■□□□□ 0.11
PROM1-209ENST00000508940 CDC42SE2Q9NRR3 84 aa15.75■□□□□ 0.11
PROM1-209ENST00000508940 LINC00959A0A1B0GUT2 108 aa15.74■□□□□ 0.11
PROM1-209ENST00000508940 TCAPO15273 167 aa15.74■□□□□ 0.11
PROM1-209ENST00000508940 ZNF664Q8N3J9 261 aa15.74■□□□□ 0.11
PROM1-209ENST00000508940 PPBPP02775 128 aa15.73■□□□□ 0.11
PROM1-209ENST00000508940 CIRBP-AS1Q8TBR5 109 aa15.73■□□□□ 0.11
PROM1-209ENST00000508940 CCL25O15444 150 aa15.72■□□□□ 0.11
PROM1-209ENST00000508940 XCL1P47992 114 aa15.72■□□□□ 0.11
PROM1-209ENST00000508940 RPL32P62910 135 aaKnown RBP15.72■□□□□ 0.11
PROM1-209ENST00000508940 IGHV3-64A0A075B6Q5 118 aa15.71■□□□□ 0.11
PROM1-209ENST00000508940 C15orf56Q8N910 161 aa15.71■□□□□ 0.11
PROM1-209ENST00000508940 DNAH8Q96JB1 4490 aa15.7■□□□□ 0.1
PROM1-209ENST00000508940 PHOX2AO14813 284 aa15.7■□□□□ 0.1
PROM1-209ENST00000508940 FOXI1Q12951 378 aa15.7■□□□□ 0.1
PROM1-209ENST00000508940 SDIM1Q6ZPB5 146 aa15.7■□□□□ 0.1
PROM1-209ENST00000508940 SMIM2Q9BVW6 85 aa15.7■□□□□ 0.1
PROM1-209ENST00000508940 CSDC2Q9Y534 153 aaKnown RBP15.7■□□□□ 0.1
PROM1-209ENST00000508940 NPYP01303 97 aa15.69■□□□□ 0.1
PROM1-209ENST00000508940 HIGD2BQ4VC39 106 aa15.69■□□□□ 0.1
PROM1-209ENST00000508940 ORMDL3Q8N138 153 aa15.69■□□□□ 0.1
PROM1-209ENST00000508940 UBE2D4Q9Y2X8 147 aa15.69■□□□□ 0.1
PROM1-209ENST00000508940 IFITM2Q01629 132 aa15.68■□□□□ 0.1
PROM1-209ENST00000508940 UQCC3Q6UW78 93 aa15.68■□□□□ 0.1
PROM1-209ENST00000508940 TMEM136Q6ZRR5 245 aa15.68■□□□□ 0.1
PROM1-209ENST00000508940 SLPIP03973 132 aa15.67■□□□□ 0.1
PROM1-209ENST00000508940 DPH3Q96FX2 82 aa15.67■□□□□ 0.1
PROM1-209ENST00000508940 PRELID3AQ96N28 172 aa15.67■□□□□ 0.1
PROM1-209ENST00000508940 TIMM21Q9BVV7 248 aa15.67■□□□□ 0.1
PROM1-209ENST00000508940 CD164L2Q6UWJ8 174 aa15.66■□□□□ 0.1
PROM1-209ENST00000508940 IGHV1-58A0A0C4DH39 117 aa15.65■□□□□ 0.1
PROM1-209ENST00000508940 C1orf196B1AJZ1 125 aa15.65■□□□□ 0.1
PROM1-209ENST00000508940 FAT1Q14517 4588 aa15.65■□□□□ 0.1
PROM1-209ENST00000508940 VPS13BQ7Z7G8 4022 aa15.64■□□□□ 0.09
PROM1-209ENST00000508940 GVQW2A0A096LPI5 108 aaPredicted RBP15.64■□□□□ 0.09
PROM1-209ENST00000508940 RAB5AP20339 215 aa15.64■□□□□ 0.09
PROM1-209ENST00000508940 RNASE13Q5GAN3 156 aaKnown RBP15.64■□□□□ 0.09
PROM1-209ENST00000508940 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.64■□□□□ 0.09
PROM1-209ENST00000508940 TRAV13-1A0A0B4J241 112 aa15.62■□□□□ 0.09
PROM1-209ENST00000508940 TMEM218A2RU14 115 aa15.62■□□□□ 0.09
PROM1-209ENST00000508940 RPL39P62891 51 aaKnown RBP15.62■□□□□ 0.09
PROM1-209ENST00000508940 Q6ZUT4 128 aa15.61■□□□□ 0.09
PROM1-209ENST00000508940 SPANXA1Q9NS26 97 aa15.61■□□□□ 0.09
PROM1-209ENST00000508940 LAMTOR2Q9Y2Q5 125 aa15.61■□□□□ 0.09
PROM1-209ENST00000508940 MALP21145 153 aa15.6■□□□□ 0.09
PROM1-209ENST00000508940 PANO1I0J062 215 aa15.59■□□□□ 0.09
PROM1-209ENST00000508940 ZNF561-AS1K7EIQ3 104 aa15.59■□□□□ 0.09
PROM1-209ENST00000508940 IMMP2LQ96T52 175 aa15.59■□□□□ 0.09
PROM1-209ENST00000508940 MAP1LC3AQ9H492 121 aa15.59■□□□□ 0.09
PROM1-209ENST00000508940 LOC389332A0A1B0GUA5 103 aa15.58■□□□□ 0.08
PROM1-209ENST00000508940 COX7A2LO14548 114 aa15.58■□□□□ 0.08
PROM1-209ENST00000508940 ADCYAP1P18509 176 aa15.58■□□□□ 0.08
PROM1-209ENST00000508940 CTDSP1Q9GZU7 261 aa15.58■□□□□ 0.08
PROM1-209ENST00000508940 COX6A2Q02221 97 aa15.57■□□□□ 0.08
PROM1-209ENST00000508940 CIRBPQ14011 172 aaKnown RBP15.56■□□□□ 0.08
PROM1-209ENST00000508940 COMMD7Q86VX2 200 aa15.56■□□□□ 0.08
PROM1-209ENST00000508940 SEC11CQ9BY50 192 aa15.56■□□□□ 0.08
PROM1-209ENST00000508940 PRSS47A8MTI9 375 aa15.55■□□□□ 0.08
PROM1-209ENST00000508940 CHTF8P0CG12 524 aa15.55■□□□□ 0.08
PROM1-209ENST00000508940 MRPS36P82909 103 aaKnown RBP15.55■□□□□ 0.08
PROM1-209ENST00000508940 LINC00526Q96FQ7 95 aa15.55■□□□□ 0.08
PROM1-209ENST00000508940 IFI27P40305 119 aaPredicted RBP15.54■□□□□ 0.08
PROM1-209ENST00000508940 RPL37AP61513 92 aaKnown RBP15.54■□□□□ 0.08
PROM1-209ENST00000508940 CARD19Q96LW7 228 aa15.54■□□□□ 0.08
PROM1-209ENST00000508940 PKIGQ9Y2B9 76 aa15.54■□□□□ 0.08
PROM1-209ENST00000508940 SRRM2Q9UQ35 2752 aaKnown RBP15.54■□□□□ 0.08
PROM1-209ENST00000508940 C5orf38Q86SI9 138 aa15.53■□□□□ 0.08
PROM1-209ENST00000508940 PRSS3P2Q8NHM4 247 aa15.53■□□□□ 0.08
PROM1-209ENST00000508940 SPACA4Q8TDM5 124 aa15.53■□□□□ 0.08
PROM1-209ENST00000508940 OPRPNQ99935 248 aaPredicted RBP15.53■□□□□ 0.08
PROM1-209ENST00000508940 FLG2Q5D862 2391 aaPredicted RBP15.52■□□□□ 0.08
PROM1-209ENST00000508940 A0A087WYN8 130 aa15.52■□□□□ 0.08
PROM1-209ENST00000508940 APOMO95445 188 aa15.52■□□□□ 0.08
PROM1-209ENST00000508940 SYCNQ0VAF6 134 aa15.52■□□□□ 0.08
PROM1-209ENST00000508940 Q8N8P6 123 aa15.52■□□□□ 0.08
PROM1-209ENST00000508940 TRAV9-1A0A075B6T8 112 aa15.51■□□□□ 0.07
PROM1-209ENST00000508940 IGKV2-24A0A0C4DH68 120 aa15.51■□□□□ 0.07
PROM1-209ENST00000508940 S100PP25815 95 aa15.51■□□□□ 0.07
PROM1-209ENST00000508940 MAJINQ3KP22 176 aa15.51■□□□□ 0.07
PROM1-209ENST00000508940 IFITM10A6NMD0 228 aa15.5■□□□□ 0.07
PROM1-209ENST00000508940 IGLV4-69A0A075B6H9 119 aa15.49■□□□□ 0.07
PROM1-209ENST00000508940 FAM104AQ969W3 186 aa15.49■□□□□ 0.07
PROM1-209ENST00000508940 PYGO1Q9Y3Y4 419 aa15.49■□□□□ 0.07
PROM1-209ENST00000508940 KRTAP10-4P60372 401 aaPredicted RBP15.48■□□□□ 0.07
PROM1-209ENST00000508940 NXT2Q9NPJ8 142 aaKnown RBP15.48■□□□□ 0.07
PROM1-209ENST00000508940 ORMDL2Q53FV1 153 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms