RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 A8MWL6 223 aa8.37□□□□□ -1.07
POLR2J3-212ENST00000507355 CCL25O15444 150 aa8.37□□□□□ -1.07
POLR2J3-212ENST00000507355 ESDP10768 282 aa8.37□□□□□ -1.07
POLR2J3-212ENST00000507355 PRR3P79522 188 aaKnown RBP8.37□□□□□ -1.07
POLR2J3-212ENST00000507355 FAM231DQ6ZW35 169 aa8.37□□□□□ -1.07
POLR2J3-212ENST00000507355 TCTE3Q8IZS6 198 aa8.37□□□□□ -1.07
POLR2J3-212ENST00000507355 IGHV1-58A0A0C4DH39 117 aa8.36□□□□□ -1.07
POLR2J3-212ENST00000507355 ST20Q9HBF5 79 aa8.36□□□□□ -1.07
POLR2J3-212ENST00000507355 TMEM250H0YL14 139 aa8.35□□□□□ -1.07
POLR2J3-212ENST00000507355 TSHBP01222 138 aa8.35□□□□□ -1.07
POLR2J3-212ENST00000507355 SS18Q15532 418 aa8.35□□□□□ -1.07
POLR2J3-212ENST00000507355 TMEM242Q9NWH2 141 aa8.35□□□□□ -1.07
POLR2J3-212ENST00000507355 LINC00474Q9P2X8 69 aa8.35□□□□□ -1.07
POLR2J3-212ENST00000507355 A0A0J9YXV3 536 aa8.34□□□□□ -1.07
POLR2J3-212ENST00000507355 CEBPGP53567 150 aa8.34□□□□□ -1.07
POLR2J3-212ENST00000507355 POLR2KP53803 58 aaKnown RBP8.34□□□□□ -1.07
POLR2J3-212ENST00000507355 MRAP2Q96G30 205 aa8.34□□□□□ -1.07
POLR2J3-212ENST00000507355 CARD19Q96LW7 228 aa8.34□□□□□ -1.07
POLR2J3-212ENST00000507355 CDC42SE2Q9NRR3 84 aa8.34□□□□□ -1.07
POLR2J3-212ENST00000507355 ZNF561-AS1K7EIQ3 104 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 BLOC1S1P78537 153 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 SYCNQ0VAF6 134 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 CT83Q5H943 113 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 CD164L2Q6UWJ8 174 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 SPINK6Q6UWN8 80 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 ZNF664Q8N3J9 261 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 BORCS7Q96B45 105 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 FAM210AQ96ND0 272 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 TMEM191AQ9H0A3 160 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 PKIGQ9Y2B9 76 aa8.33□□□□□ -1.08
POLR2J3-212ENST00000507355 A0A1B0GUT8 65 aa8.32□□□□□ -1.08
POLR2J3-212ENST00000507355 RAB4AP20338 218 aa8.32□□□□□ -1.08
POLR2J3-212ENST00000507355 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
POLR2J3-212ENST00000507355 MRPL52Q86TS9 123 aaKnown RBP8.32□□□□□ -1.08
POLR2J3-212ENST00000507355 TRBV27A0A0K0K1C4 114 aa8.31□□□□□ -1.08
POLR2J3-212ENST00000507355 HIGD1CA8MV81 97 aa8.31□□□□□ -1.08
POLR2J3-212ENST00000507355 SRSF9Q13242 221 aaKnown RBP eCLIP8.31□□□□□ -1.08
POLR2J3-212ENST00000507355 ALKAL2Q6UX46 152 aa8.31□□□□□ -1.08
POLR2J3-212ENST00000507355 TSKUQ8WUA8 353 aa8.31□□□□□ -1.08
POLR2J3-212ENST00000507355 LPAP08519 4548 aa8.31□□□□□ -1.08
POLR2J3-212ENST00000507355 C7orf77A4D0Y5 90 aa8.3□□□□□ -1.08
POLR2J3-212ENST00000507355 A6NJY4 79 aa8.3□□□□□ -1.08
POLR2J3-212ENST00000507355 REG3GQ6UW15 175 aa8.3□□□□□ -1.08
POLR2J3-212ENST00000507355 Q6ZRP5 223 aa8.3□□□□□ -1.08
POLR2J3-212ENST00000507355 AMN1Q8IY45 258 aa8.3□□□□□ -1.08
POLR2J3-212ENST00000507355 IGLV4-69A0A075B6H9 119 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 SMKR1H3BMG3 65 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 VCYO14598 125 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 MALP21145 153 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 CAMPP49913 170 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 PTTG1IPP53801 180 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 GAGE2BQ13066 116 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 SMIM7Q9BQ49 75 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 OSTCQ9NRP0 149 aa8.29□□□□□ -1.08
POLR2J3-212ENST00000507355 LOC107984640A0A0U1RRK4 108 aa8.28□□□□□ -1.08
POLR2J3-212ENST00000507355 C1orf196B1AJZ1 125 aa8.28□□□□□ -1.08
POLR2J3-212ENST00000507355 FCER1GP30273 86 aa8.28□□□□□ -1.08
POLR2J3-212ENST00000507355 LINC01551Q86U37 167 aa8.28□□□□□ -1.08
POLR2J3-212ENST00000507355 ISOC2Q96AB3 205 aa8.28□□□□□ -1.08
POLR2J3-212ENST00000507355 EIF5A2Q9GZV4 153 aaKnown RBP8.28□□□□□ -1.08
POLR2J3-212ENST00000507355 A0A1W2PNN7 141 aa8.27□□□□□ -1.09
POLR2J3-212ENST00000507355 COX7A2LO14548 114 aa8.27□□□□□ -1.09
POLR2J3-212ENST00000507355 RNASE13Q5GAN3 156 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-212ENST00000507355 NUP35Q8NFH5 326 aa8.27□□□□□ -1.09
POLR2J3-212ENST00000507355 KRTAP9-2Q9BYQ4 174 aa8.27□□□□□ -1.09
POLR2J3-212ENST00000507355 CSDC2Q9Y534 153 aaKnown RBP8.27□□□□□ -1.09
POLR2J3-212ENST00000507355 ZNF727A8MUV8 499 aa8.26□□□□□ -1.09
POLR2J3-212ENST00000507355 RIGQ13278 110 aa8.26□□□□□ -1.09
POLR2J3-212ENST00000507355 C5orf38Q86SI9 138 aa8.26□□□□□ -1.09
POLR2J3-212ENST00000507355 CAMK2N2Q96S95 79 aa8.26□□□□□ -1.09
POLR2J3-212ENST00000507355 UBE2D4Q9Y2X8 147 aa8.26□□□□□ -1.09
POLR2J3-212ENST00000507355 TRAV13-1A0A0B4J241 112 aa8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 PPP1R17O96001 155 aa8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 SRP19P09132 144 aaKnown RBP8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 SUMO2P61956 95 aaKnown RBP8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 SMAGPQ0VAQ4 97 aa8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 NRACQ8N912 160 aa8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 KIR2DL4Q99706 377 aa8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 V9GYV3 84 aa8.25□□□□□ -1.09
POLR2J3-212ENST00000507355 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
POLR2J3-212ENST00000507355 C2orf48Q96LS8 159 aa8.24□□□□□ -1.09
POLR2J3-212ENST00000507355 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.23□□□□□ -1.09
POLR2J3-212ENST00000507355 APOMO95445 188 aa8.23□□□□□ -1.09
POLR2J3-212ENST00000507355 MRPL51Q4U2R6 128 aaKnown RBP8.23□□□□□ -1.09
POLR2J3-212ENST00000507355 C9orf116Q5BN46 136 aaPredicted RBP8.23□□□□□ -1.09
POLR2J3-212ENST00000507355 Q6ZUT4 128 aa8.23□□□□□ -1.09
POLR2J3-212ENST00000507355 OPRPNQ99935 248 aaPredicted RBP8.23□□□□□ -1.09
POLR2J3-212ENST00000507355 PSORS1C2Q9UIG4 136 aa8.23□□□□□ -1.09
POLR2J3-212ENST00000507355 PPP1R2P9O14990 202 aa8.22□□□□□ -1.09
POLR2J3-212ENST00000507355 RPL18AQ02543 176 aaKnown RBP8.22□□□□□ -1.09
POLR2J3-212ENST00000507355 FAM104BQ5XKR9 115 aa8.22□□□□□ -1.09
POLR2J3-212ENST00000507355 TMEM18Q96B42 140 aa8.22□□□□□ -1.09
POLR2J3-212ENST00000507355 TIMM21Q9BVV7 248 aa8.22□□□□□ -1.09
POLR2J3-212ENST00000507355 NAT8BQ9UHF3 227 aa8.22□□□□□ -1.09
POLR2J3-212ENST00000507355 MUC2Q02817 5179 aa8.22□□□□□ -1.09
POLR2J3-212ENST00000507355 MT-ND6P03923 174 aa8.21□□□□□ -1.1
POLR2J3-212ENST00000507355 TMEM241Q24JQ0 296 aa8.21□□□□□ -1.1
POLR2J3-212ENST00000507355 PHF5AQ7RTV0 110 aaKnown RBP8.21□□□□□ -1.1
POLR2J3-212ENST00000507355 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
POLR2J3-212ENST00000507355 LINC00862A6NCI5 91 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms