RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 TSHBP01222 138 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 FGF6P10767 208 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 ZNF25P17030 456 aaPredicted RBP5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 CIRBPQ14011 172 aaKnown RBP5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 AMMECR1LQ6DCA0 310 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 AMN1Q8IY45 258 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 C15orf56Q8N910 161 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 NUP35Q8NFH5 326 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 MRAP2Q96G30 205 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 ST20Q9HBF5 79 aa5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.82□□□□□ -1.48
PDLIM5-209ENST00000506632 GAGE12HA6NDE8 117 aa5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 PMCHP20382 165 aa5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 RIGQ13278 110 aa5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 MRPL52Q86TS9 123 aaKnown RBP5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 SMDT1Q9H4I9 107 aa5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 TMEM242Q9NWH2 141 aa5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 NAT8Q9UHE5 227 aa5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 NAT8BQ9UHF3 227 aa5.81□□□□□ -1.48
PDLIM5-209ENST00000506632 IGKV3OR2-268A0A0C4DH90 116 aa5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 SMIM27A0A1W2PRY6 76 aa5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 KRTAP29-1A8MX34 341 aaPredicted RBP5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 PEA15Q15121 130 aa5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 ADIRFQ15847 76 aa5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 RNASEKQ6P5S7 137 aaKnown RBP5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 NRACQ8N912 160 aa5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 OR5A1Q8NGJ0 315 aa5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 CHCHD10Q8WYQ3 142 aaPredicted RBP5.8□□□□□ -1.48
PDLIM5-209ENST00000506632 IGHV3-64A0A075B6Q5 118 aa5.79□□□□□ -1.48
PDLIM5-209ENST00000506632 GVQW2A0A096LPI5 108 aaPredicted RBP5.79□□□□□ -1.48
PDLIM5-209ENST00000506632 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.79□□□□□ -1.48
PDLIM5-209ENST00000506632 C7orf77A4D0Y5 90 aa5.79□□□□□ -1.48
PDLIM5-209ENST00000506632 SMKR1H3BMG3 65 aa5.79□□□□□ -1.48
PDLIM5-209ENST00000506632 FOXI1Q12951 378 aa5.79□□□□□ -1.48
PDLIM5-209ENST00000506632 FAM104BQ5XKR9 115 aa5.79□□□□□ -1.48
PDLIM5-209ENST00000506632 LINC00959A0A1B0GUT2 108 aa5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 A0A1B0GW15 77 aa5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 VCYO14598 125 aa5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 PPP1R17O96001 155 aa5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 SUMO2P61956 95 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 MRPL51Q4U2R6 128 aaKnown RBP5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 TMEM101Q96IK0 257 aa5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 BTF3L4Q96K17 158 aa5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 CDC42SE2Q9NRR3 84 aa5.78□□□□□ -1.48
PDLIM5-209ENST00000506632 TRBV24-1A0A075B6N3 115 aa5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 A0A1B0GXF2 115 aa5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 CCL25O15444 150 aa5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 RPL37AP61513 92 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 RPL32P62910 135 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 RNF151Q2KHN1 245 aa5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 HIGD2BQ4VC39 106 aa5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 ZNF664Q8N3J9 261 aa5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 SPACA4Q8TDM5 124 aa5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 CSDC2Q9Y534 153 aaKnown RBP5.77□□□□□ -1.49
PDLIM5-209ENST00000506632 LRP1Q07954 4544 aaKnown RBP5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 PKHD1L1Q86WI1 4243 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 LINC00862A6NCI5 91 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 PPP1R2P9O14990 202 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 CHTF8P0CG12 524 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 XCL1P47992 114 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 HNRNPA3P51991 378 aaKnown RBP5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 KIR2DL4Q99706 377 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 C20orf78Q9BR46 151 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 UBE2D4Q9Y2X8 147 aa5.76□□□□□ -1.49
PDLIM5-209ENST00000506632 A0A087WYN8 130 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 GAGE10A6NGK3 116 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 OXTP01178 125 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 FCER1GP30273 86 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 CAMPP49913 170 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 HBBP68871 147 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 SS18Q15532 418 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 CD164L2Q6UWJ8 174 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 TIMM21Q9BVV7 248 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 PLAC8Q9NZF1 115 aa5.75□□□□□ -1.49
PDLIM5-209ENST00000506632 FAT3Q8TDW7 4589 aa5.74□□□□□ -1.49
PDLIM5-209ENST00000506632 IGHV1-58A0A0C4DH39 117 aa5.74□□□□□ -1.49
PDLIM5-209ENST00000506632 PCP4P48539 62 aa5.74□□□□□ -1.49
PDLIM5-209ENST00000506632 COX6A2Q02221 97 aa5.74□□□□□ -1.49
PDLIM5-209ENST00000506632 MRPL54Q6P161 138 aaKnown RBP5.74□□□□□ -1.49
PDLIM5-209ENST00000506632 PRSS3P2Q8NHM4 247 aa5.74□□□□□ -1.49
PDLIM5-209ENST00000506632 C1orf196B1AJZ1 125 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 PHOX2AO14813 284 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 S100A8P05109 93 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 CKS2P33552 79 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 SMAGPQ0VAQ4 97 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 Q6ZUT4 128 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 FAM104AQ969W3 186 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 SMIM2Q9BVW6 85 aa5.73□□□□□ -1.49
PDLIM5-209ENST00000506632 A0A096LNI7 61 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 C9orf118A6NHY6 69 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 D6R8Y8 96 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 F8W036 122 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 TCAPO15273 167 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 NPYP01303 97 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 PPBPP02775 128 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 RNASE13Q5GAN3 156 aaKnown RBP5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 ATP5L2Q7Z4Y8 100 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 TMEM18Q96B42 140 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 LINC00526Q96FQ7 95 aa5.72□□□□□ -1.49
PDLIM5-209ENST00000506632 IGKV2-24A0A0C4DH68 120 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms