RNA–Protein interactions for RNA: ENST00000504634.5

NEDD9-209, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-209ENST00000504634 MRAP2Q96G30 205 aa7.47□□□□□ -1.21
NEDD9-209ENST00000504634 LPAP08519 4548 aa7.46□□□□□ -1.22
NEDD9-209ENST00000504634 LOC107984640A0A0U1RRK4 108 aa7.46□□□□□ -1.22
NEDD9-209ENST00000504634 MT-ND6P03923 174 aa7.46□□□□□ -1.22
NEDD9-209ENST00000504634 CAMPP49913 170 aa7.46□□□□□ -1.22
NEDD9-209ENST00000504634 EIF5AL1Q6IS14 154 aaKnown RBP7.46□□□□□ -1.22
NEDD9-209ENST00000504634 CD164L2Q6UWJ8 174 aa7.46□□□□□ -1.22
NEDD9-209ENST00000504634 RNASE7Q9H1E1 156 aaKnown RBP7.46□□□□□ -1.22
NEDD9-209ENST00000504634 IGLV4-69A0A075B6H9 119 aa7.45□□□□□ -1.22
NEDD9-209ENST00000504634 BCL2P10415 239 aa7.45□□□□□ -1.22
NEDD9-209ENST00000504634 ST20Q9HBF5 79 aa7.45□□□□□ -1.22
NEDD9-209ENST00000504634 TMEM242Q9NWH2 141 aa7.45□□□□□ -1.22
NEDD9-209ENST00000504634 A0A1W2PNN7 141 aa7.44□□□□□ -1.22
NEDD9-209ENST00000504634 ZNF664Q8N3J9 261 aa7.44□□□□□ -1.22
NEDD9-209ENST00000504634 CAMK2N2Q96S95 79 aa7.44□□□□□ -1.22
NEDD9-209ENST00000504634 PSORS1C2Q9UIG4 136 aa7.44□□□□□ -1.22
NEDD9-209ENST00000504634 TRBV6-5A0A0K0K1A5 114 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 KRTAP9-6A0A140TA67 174 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 COX7A2LO14548 114 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 TSHBP01222 138 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 ESDP10768 282 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 RPL18AQ02543 176 aaKnown RBP7.43□□□□□ -1.22
NEDD9-209ENST00000504634 C1orf137Q5JT78 98 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 OCC1Q8TAD7 63 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 CDC42SE2Q9NRR3 84 aa7.43□□□□□ -1.22
NEDD9-209ENST00000504634 C7orf77A4D0Y5 90 aa7.42□□□□□ -1.22
NEDD9-209ENST00000504634 C1orf196B1AJZ1 125 aa7.42□□□□□ -1.22
NEDD9-209ENST00000504634 K7EN84 100 aa7.42□□□□□ -1.22
NEDD9-209ENST00000504634 GATCO43716 136 aaKnown RBP7.42□□□□□ -1.22
NEDD9-209ENST00000504634 APOMO95445 188 aa7.42□□□□□ -1.22
NEDD9-209ENST00000504634 TAGLN2P37802 199 aaKnown RBP7.42□□□□□ -1.22
NEDD9-209ENST00000504634 C9orf116Q5BN46 136 aaPredicted RBP7.42□□□□□ -1.22
NEDD9-209ENST00000504634 MRPL52Q86TS9 123 aaKnown RBP7.42□□□□□ -1.22
NEDD9-209ENST00000504634 AKAP14Q86UN6 197 aa7.42□□□□□ -1.22
NEDD9-209ENST00000504634 BORCS7Q96B45 105 aa7.42□□□□□ -1.22
NEDD9-209ENST00000504634 FAM210AQ96ND0 272 aa7.42□□□□□ -1.22
NEDD9-209ENST00000504634 A0A1B0GVG6 124 aa7.41□□□□□ -1.22
NEDD9-209ENST00000504634 NUP35Q8NFH5 326 aa7.41□□□□□ -1.22
NEDD9-209ENST00000504634 A8MWL6 223 aa7.4□□□□□ -1.22
NEDD9-209ENST00000504634 FCER1GP30273 86 aa7.4□□□□□ -1.22
NEDD9-209ENST00000504634 PHF5AQ7RTV0 110 aaKnown RBP7.4□□□□□ -1.22
NEDD9-209ENST00000504634 TCTE3Q8IZS6 198 aa7.4□□□□□ -1.22
NEDD9-209ENST00000504634 DIRC1Q969H9 104 aa7.4□□□□□ -1.22
NEDD9-209ENST00000504634 FAT4Q6V0I7 4981 aa7.39□□□□□ -1.23
NEDD9-209ENST00000504634 TRAV13-1A0A0B4J241 112 aa7.39□□□□□ -1.23
NEDD9-209ENST00000504634 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-209ENST00000504634 SMAGPQ0VAQ4 97 aa7.39□□□□□ -1.23
NEDD9-209ENST00000504634 PRR26Q8N8Z3 221 aa7.39□□□□□ -1.23
NEDD9-209ENST00000504634 C2orf48Q96LS8 159 aa7.39□□□□□ -1.23
NEDD9-209ENST00000504634 OPRPNQ99935 248 aaPredicted RBP7.39□□□□□ -1.23
NEDD9-209ENST00000504634 hCG_2014768A0A024R1R8 64 aa7.38□□□□□ -1.23
NEDD9-209ENST00000504634 A0A087WZ39 114 aa7.38□□□□□ -1.23
NEDD9-209ENST00000504634 TRBV27A0A0K0K1C4 114 aa7.38□□□□□ -1.23
NEDD9-209ENST00000504634 POLR2KP53803 58 aaKnown RBP7.38□□□□□ -1.23
NEDD9-209ENST00000504634 SPAG11BQ08648 103 aa7.38□□□□□ -1.23
NEDD9-209ENST00000504634 RNASE13Q5GAN3 156 aaKnown RBP7.38□□□□□ -1.23
NEDD9-209ENST00000504634 C5orf38Q86SI9 138 aa7.38□□□□□ -1.23
NEDD9-209ENST00000504634 VCYO14598 125 aa7.37□□□□□ -1.23
NEDD9-209ENST00000504634 IGLV7-43P04211 117 aa7.37□□□□□ -1.23
NEDD9-209ENST00000504634 FAM231DQ6ZW35 169 aa7.37□□□□□ -1.23
NEDD9-209ENST00000504634 TSKUQ8WUA8 353 aa7.37□□□□□ -1.23
NEDD9-209ENST00000504634 TMEM191AQ9H0A3 160 aa7.37□□□□□ -1.23
NEDD9-209ENST00000504634 A0A1B0GUT8 65 aa7.36□□□□□ -1.23
NEDD9-209ENST00000504634 RAB4AP20338 218 aa7.36□□□□□ -1.23
NEDD9-209ENST00000504634 CEBPGP53567 150 aa7.36□□□□□ -1.23
NEDD9-209ENST00000504634 CT83Q5H943 113 aa7.36□□□□□ -1.23
NEDD9-209ENST00000504634 CSDC2Q9Y534 153 aaKnown RBP7.36□□□□□ -1.23
NEDD9-209ENST00000504634 HIGD1CA8MV81 97 aa7.35□□□□□ -1.23
NEDD9-209ENST00000504634 RNF151Q2KHN1 245 aa7.35□□□□□ -1.23
NEDD9-209ENST00000504634 AMN1Q8IY45 258 aa7.35□□□□□ -1.23
NEDD9-209ENST00000504634 IMMP2LQ96T52 175 aa7.35□□□□□ -1.23
NEDD9-209ENST00000504634 KIR2DL4Q99706 377 aa7.35□□□□□ -1.23
NEDD9-209ENST00000504634 UBE2D4Q9Y2X8 147 aa7.35□□□□□ -1.23
NEDD9-209ENST00000504634 H0Y9J4 135 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 TMEM250H0YL14 139 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 SMKR1H3BMG3 65 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 PPP1R17O96001 155 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 PRR4Q16378 134 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 SLC51BQ86UW2 128 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 OR10D4PQ8NGN7 298 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 TMEM18Q96B42 140 aa7.34□□□□□ -1.23
NEDD9-209ENST00000504634 IGLV1-50A0A075B6I6 118 aa7.33□□□□□ -1.24
NEDD9-209ENST00000504634 UBE2D1P51668 147 aa7.33□□□□□ -1.24
NEDD9-209ENST00000504634 SUMO2P61956 95 aaKnown RBP7.33□□□□□ -1.24
NEDD9-209ENST00000504634 Q6ZUT4 128 aa7.33□□□□□ -1.24
NEDD9-209ENST00000504634 ORAOV1Q8WV07 137 aa7.33□□□□□ -1.24
NEDD9-209ENST00000504634 MRPL35Q9NZE8 188 aaKnown RBP7.33□□□□□ -1.24
NEDD9-209ENST00000504634 FAM168BA1KXE4 195 aa7.32□□□□□ -1.24
NEDD9-209ENST00000504634 F8WDY8 70 aa7.32□□□□□ -1.24
NEDD9-209ENST00000504634 NDUFA1O15239 70 aa7.32□□□□□ -1.24
NEDD9-209ENST00000504634 RIGQ13278 110 aa7.32□□□□□ -1.24
NEDD9-209ENST00000504634 GAGE2EQ4V326 116 aa7.32□□□□□ -1.24
NEDD9-209ENST00000504634 FAM19A5Q7Z5A7 132 aaPredicted RBP7.32□□□□□ -1.24
NEDD9-209ENST00000504634 GAGE2DQ9UEU5 116 aa7.32□□□□□ -1.24
NEDD9-209ENST00000504634 PPP1R2P9O14990 202 aa7.31□□□□□ -1.24
NEDD9-209ENST00000504634 UBE2BP63146 152 aa7.31□□□□□ -1.24
NEDD9-209ENST00000504634 NRACQ8N912 160 aa7.31□□□□□ -1.24
NEDD9-209ENST00000504634 MUC2Q02817 5179 aa7.3□□□□□ -1.24
NEDD9-209ENST00000504634 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
NEDD9-209ENST00000504634 TMEM241Q24JQ0 296 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms