RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 A8MZ25 164 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 C1orf158Q8N1D5 194 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 MAPKAPK5-AS1Q8N8E1 139 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 MKI67P46013 3256 aaKnown RBP5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 RNASE3P12724 160 aaKnown RBP5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 C6orf99Q4VX62 202 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 RNASE8Q8TDE3 154 aaKnown RBP5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 C9orf85Q96MD7 179 aa5.28□□□□□ -1.56
SYNPO2-205ENST00000504178 IGLV9-49A0A0B4J1Y8 123 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 C3orf84H3BNL1 204 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 BRCA2P51587 3418 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 TRBV6-5A0A0K0K1A5 114 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 NDUFA7O95182 113 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 ATP5EP2Q5VTU8 51 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 USF3Q68DE3 2245 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 SPINK6Q6UWN8 80 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 SMR3AQ99954 134 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 EP300Q09472 2414 aaPredicted RBP5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 DIDO1Q9BTC0 2240 aaKnown RBP5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 TRBV30A0A0K0K1B3 111 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 TRBV27A0A0K0K1C4 114 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 PRM2P04554 102 aa5.27□□□□□ -1.57
SYNPO2-205ENST00000504178 CCKP06307 115 aa5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 CNOT1A5YKK6 2376 aaKnown RBP5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 LINC00474Q9P2X8 69 aa5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 IGHV4-30-4P0DP06 118 aa5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 NRACQ8N912 160 aa5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 TIMM17BO60830 172 aa5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 KLLNB2CW77 178 aa5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 SVIPQ8NHG7 77 aa5.26□□□□□ -1.57
SYNPO2-205ENST00000504178 NUPR2A6NF83 97 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 CDSNQ15517 529 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 OXLD1Q5BKU9 147 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 BRK1Q8WUW1 75 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 MRPS36P82909 103 aaKnown RBP5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 COX17Q14061 63 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 MPLKIPQ8TAP9 179 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 TP73-AS1Q9UF72 201 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 RETNQ9HD89 108 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 C3orf22Q8N5N4 141 aa5.25□□□□□ -1.57
SYNPO2-205ENST00000504178 EDN2P20800 178 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 PRR15LQ9BU68 103 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 C11orf21Q9P2W6 132 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 FAM186AA6NE01 2351 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 FAM236DA0A1B0GTK5 79 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 MT-ATP8P03928 68 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 FAM236CP0DP71 79 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 UBE2D2P62837 147 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 MRGPRG-AS1Q2M3A8 158 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 C20orf197Q8N268 126 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 SPTSSBQ8NFR3 76 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 SMIM11BQ8TCY0 68 aa5.24□□□□□ -1.57
SYNPO2-205ENST00000504178 GTF3C1Q12789 2109 aa5.23□□□□□ -1.57
SYNPO2-205ENST00000504178 K7ERS5 55 aa5.23□□□□□ -1.57
SYNPO2-205ENST00000504178 NDUFV3P56181 108 aaKnown RBP5.23□□□□□ -1.57
SYNPO2-205ENST00000504178 WFDC13Q8IUB5 93 aa5.23□□□□□ -1.57
SYNPO2-205ENST00000504178 AVPP01185 164 aa5.23□□□□□ -1.57
SYNPO2-205ENST00000504178 Q6ZQY7 126 aa5.23□□□□□ -1.57
SYNPO2-205ENST00000504178 C5orf42Q9H799 3197 aa5.23□□□□□ -1.57
SYNPO2-205ENST00000504178 ZNF73O43830 326 aaPredicted RBP5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 C10orf25Q5T742 122 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 Q8IZM0 81 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 NCOR1O75376 2440 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 ZGRF1Q86YA3 2104 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 XIRP2A4UGR9 3374 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 KRTAP10-9P60411 292 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 MED13Q9UHV7 2174 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 MRPS12O15235 138 aaKnown RBP5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 MALRD1Q5VYJ5 2156 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 M0QXV9 152 aa5.22□□□□□ -1.57
SYNPO2-205ENST00000504178 IGLV5-52A0A0A0MRZ9 124 aa5.21□□□□□ -1.57
SYNPO2-205ENST00000504178 UQCRQO14949 82 aa5.21□□□□□ -1.57
SYNPO2-205ENST00000504178 SPTA1P02549 2419 aa5.21□□□□□ -1.57
SYNPO2-205ENST00000504178 CEP250Q9BV73 2442 aa5.21□□□□□ -1.57
SYNPO2-205ENST00000504178 CDC42SE2Q9NRR3 84 aa5.21□□□□□ -1.57
SYNPO2-205ENST00000504178 C16orf95Q9H693 158 aa5.21□□□□□ -1.58
SYNPO2-205ENST00000504178 CYSRT1A8MQ03 144 aa5.21□□□□□ -1.58
SYNPO2-205ENST00000504178 FAM30AQ9NZY2 134 aa5.21□□□□□ -1.58
SYNPO2-205ENST00000504178 NDUFC2-KCTD14E9PQ53 114 aa5.21□□□□□ -1.58
SYNPO2-205ENST00000504178 POLR2KP53803 58 aaKnown RBP5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 REG3GQ6UW15 175 aa5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 CHD3Q12873 2000 aaKnown RBP5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 GAS8-AS1O95177 125 aa5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 BRI3O95415 125 aa5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
SYNPO2-205ENST00000504178 YPEL4Q96NS1 127 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 LRP4O75096 1905 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 ODF3L2Q3SX64 289 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 SNURFQ9Y675 71 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 LST1O00453 97 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 MUC7Q8TAX7 377 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 ARHGAP21Q5T5U3 1957 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 KIAA1549Q9HCM3 1950 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 PKDREJQ9NTG1 2253 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 TECTAO75443 2155 aa5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 MRPL55Q7Z7F7 128 aaKnown RBP5.19□□□□□ -1.58
SYNPO2-205ENST00000504178 CIRBP-AS1Q8TBR5 109 aa5.18□□□□□ -1.58
SYNPO2-205ENST00000504178 NACAE9PAV3 2078 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms