RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TRBV6-1A0A0K0K1D8 114 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 H0Y9P7 68 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 CCL3P10147 92 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 Q6ZRP5 223 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 IGHV3-74A0A0B4J1X5 117 aa4.49□□□□□ -1.69
CLCN3-204ENST00000504131 RPL39LQ96EH5 51 aaKnown RBP4.49□□□□□ -1.69
CLCN3-204ENST00000504131 Q75L30 129 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 C20orf203Q8NBC4 194 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 RNF185Q96GF1 192 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 ETDCA0A1B0GVM5 59 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 RPL39P62891 51 aaKnown RBP4.48□□□□□ -1.69
CLCN3-204ENST00000504131 UNC13CQ8NB66 2214 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 DHRS4-AS1Q9P1J3 65 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 EML6Q6ZMW3 1958 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 CLPSP04118 112 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 FLVCR1-AS1Q8TAF5 88 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 ALPK2Q86TB3 2170 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 NACAE9PAV3 2078 aa4.48□□□□□ -1.69
CLCN3-204ENST00000504131 PLXNA4Q9HCM2 1894 aa4.47□□□□□ -1.69
CLCN3-204ENST00000504131 WFDC10BQ8IUB3 73 aa4.47□□□□□ -1.69
CLCN3-204ENST00000504131 FREM3P0C091 2139 aa4.47□□□□□ -1.69
CLCN3-204ENST00000504131 MED14OSP0DP75 135 aa4.47□□□□□ -1.69
CLCN3-204ENST00000504131 LINC00322Q6ZN03 302 aaPredicted RBP4.47□□□□□ -1.69
CLCN3-204ENST00000504131 PLXNB1O43157 2135 aa4.47□□□□□ -1.69
CLCN3-204ENST00000504131 IGLV3-12A0A075B6K2 115 aa4.47□□□□□ -1.69
CLCN3-204ENST00000504131 A0A0J9YX75 114 aa4.46□□□□□ -1.69
CLCN3-204ENST00000504131 ELOF1P60002 83 aaKnown RBP4.46□□□□□ -1.69
CLCN3-204ENST00000504131 C9orf47Q6ZRZ4 202 aa4.46□□□□□ -1.69
CLCN3-204ENST00000504131 VWA8A3KMH1 1905 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 A0A096LNJ9 63 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 C11orf71Q6IPW1 123 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 CSAG1Q6PB30 78 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 A0A1B0GU69 56 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 ZNF580Q9UK33 172 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3-66A0A0C4DH42 116 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 IGKV4-1P06312 121 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 MSMPQ1L6U9 139 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 SSBP3-AS1Q7Z2R9 100 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 Q8N2B8 174 aa4.46□□□□□ -1.7
CLCN3-204ENST00000504131 GOLGB1Q14789 3259 aaKnown RBP4.45□□□□□ -1.7
CLCN3-204ENST00000504131 TTC28Q96AY4 2481 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 MOBPQ13875 183 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 CACNA1EQ15878 2313 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 COL4A3Q01955 1670 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV7-81A0A0B4J1V7 117 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 PATE2Q6UY27 113 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 FANCMQ8IYD8 2048 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 A0A087WYN8 130 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 TRGV4A0A0C4DH28 118 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 OBSL1O75147 1896 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 CCL3L1P16619 93 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 SPTBN2O15020 2390 aa4.45□□□□□ -1.7
CLCN3-204ENST00000504131 KIF25-AS1Q9Y6Z4 181 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 PIEZO1Q92508 2521 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 DEFB105AQ8NG35 78 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 DSCAML1Q8TD84 2053 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 MED12Q93074 2177 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 DNAJC13O75165 2243 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 MYOFQ9NZM1 2061 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 HEATR5BQ9P2D3 2071 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV4-4A0A075B6R2 117 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 NTM-AS1Q6ZSK4 140 aa4.44□□□□□ -1.7
CLCN3-204ENST00000504131 CACNA1IQ9P0X4 2223 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 IGFL4Q6B9Z1 124 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 SMIM11BQ8TCY0 68 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 HTTP42858 3142 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3-16A0A0C4DH30 117 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 ARHGAP21Q5T5U3 1957 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 Q5VV11 94 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 GVINP1Q7Z2Y8 2422 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 RNF5Q99942 180 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 S4R3C0 116 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3OR16-12A0A075B7B8 117 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 A6NN06 94 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 LINC01560Q8TB33 94 aa4.43□□□□□ -1.7
CLCN3-204ENST00000504131 TRGV2A0A075B6R0 118 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 LHBP01229 141 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 KIAA1549LQ6ZVL6 1849 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 PLXNA2O75051 1894 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 NUP210LQ5VU65 1888 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3-11P01762 117 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 SMIM29Q86T20 159 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 ASCC3Q8N3C0 2202 aaKnown RBP4.42□□□□□ -1.7
CLCN3-204ENST00000504131 SEC16AO15027 2179 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 KRTAP27-1Q3LI81 207 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 TMEM131Q92545 1883 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3-35A0A0C4DH35 117 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 LENEPQ9Y5L5 61 aa4.42□□□□□ -1.7
CLCN3-204ENST00000504131 IGLV3-9A0A075B6K5 115 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3OR16-10A0A075B7F0 116 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 NDUFA1O15239 70 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 FSTL3O95633 263 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 IGHV3-23P01764 117 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 CRIP3Q6Q6R5 217 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 SMAD5-AS1Q9Y6J3 95 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 KMT2EQ8IZD2 1858 aa4.41□□□□□ -1.7
CLCN3-204ENST00000504131 IGLV3-1P01715 115 aa4.4□□□□□ -1.7
CLCN3-204ENST00000504131 ESPL1Q14674 2120 aa4.4□□□□□ -1.7
CLCN3-204ENST00000504131 COA5Q86WW8 74 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms