RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 NCR2O95944 276 aa14.27□□□□□ -0.13
LSM6-203ENST00000503982 S100PP25815 95 aa14.27□□□□□ -0.13
LSM6-203ENST00000503982 AMMECR1LQ6DCA0 310 aa14.27□□□□□ -0.13
LSM6-203ENST00000503982 KRTAP26-1Q6PEX3 210 aa14.27□□□□□ -0.13
LSM6-203ENST00000503982 AP5S1Q9NUS5 200 aa14.27□□□□□ -0.13
LSM6-203ENST00000503982 TRBV27A0A0K0K1C4 114 aa14.26□□□□□ -0.13
LSM6-203ENST00000503982 SDHAF1A6NFY7 115 aa14.26□□□□□ -0.13
LSM6-203ENST00000503982 PHOX2AO14813 284 aa14.26□□□□□ -0.13
LSM6-203ENST00000503982 GAS8-AS1O95177 125 aa14.26□□□□□ -0.13
LSM6-203ENST00000503982 POLR2KP53803 58 aaKnown RBP14.26□□□□□ -0.13
LSM6-203ENST00000503982 RPL32P62910 135 aaKnown RBP14.26□□□□□ -0.13
LSM6-203ENST00000503982 RPS10P5Q9NQ39 176 aa14.26□□□□□ -0.13
LSM6-203ENST00000503982 RPS10P46783 165 aaKnown RBP14.25□□□□□ -0.13
LSM6-203ENST00000503982 RNASEKQ6P5S7 137 aaKnown RBP14.25□□□□□ -0.13
LSM6-203ENST00000503982 C9orf163Q8N9P6 203 aa14.25□□□□□ -0.13
LSM6-203ENST00000503982 ST20Q9HBF5 79 aa14.25□□□□□ -0.13
LSM6-203ENST00000503982 APCSP02743 223 aa14.24□□□□□ -0.13
LSM6-203ENST00000503982 SLC7A5P1Q8MH63 180 aa14.24□□□□□ -0.13
LSM6-203ENST00000503982 C20orf78Q9BR46 151 aa14.24□□□□□ -0.13
LSM6-203ENST00000503982 COX19Q49B96 90 aa14.23□□□□□ -0.13
LSM6-203ENST00000503982 DPH3Q96FX2 82 aa14.23□□□□□ -0.13
LSM6-203ENST00000503982 LAMTOR2Q9Y2Q5 125 aa14.23□□□□□ -0.13
LSM6-203ENST00000503982 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.22□□□□□ -0.13
LSM6-203ENST00000503982 IGKV2-29A2NJV5 120 aaPredicted RBP14.22□□□□□ -0.13
LSM6-203ENST00000503982 I3L3M4 83 aa14.22□□□□□ -0.13
LSM6-203ENST00000503982 PMCHP20382 165 aa14.22□□□□□ -0.13
LSM6-203ENST00000503982 CKS2P33552 79 aa14.22□□□□□ -0.13
LSM6-203ENST00000503982 RPL37AP61513 92 aaKnown RBP14.22□□□□□ -0.13
LSM6-203ENST00000503982 SUMO2P61956 95 aaKnown RBP14.22□□□□□ -0.13
LSM6-203ENST00000503982 TMEM136Q6ZRR5 245 aa14.22□□□□□ -0.13
LSM6-203ENST00000503982 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.21□□□□□ -0.13
LSM6-203ENST00000503982 GAGE12HA6NDE8 117 aa14.21□□□□□ -0.13
LSM6-203ENST00000503982 ORMDL3Q8N138 153 aa14.21□□□□□ -0.13
LSM6-203ENST00000503982 GNB1LQ9BYB4 327 aa14.21□□□□□ -0.13
LSM6-203ENST00000503982 PRSS47A8MTI9 375 aa14.2□□□□□ -0.14
LSM6-203ENST00000503982 D6R8Y8 96 aa14.2□□□□□ -0.14
LSM6-203ENST00000503982 SMKR1H3BMG3 65 aa14.2□□□□□ -0.14
LSM6-203ENST00000503982 IGHV3-64A0A075B6Q5 118 aa14.19□□□□□ -0.14
LSM6-203ENST00000503982 H7C423 109 aa14.19□□□□□ -0.14
LSM6-203ENST00000503982 VCYO14598 125 aa14.19□□□□□ -0.14
LSM6-203ENST00000503982 TNFRSF6BO95407 300 aa14.19□□□□□ -0.14
LSM6-203ENST00000503982 CFAP161Q6P656 301 aa14.19□□□□□ -0.14
LSM6-203ENST00000503982 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.19□□□□□ -0.14
LSM6-203ENST00000503982 KRTAP29-1A8MX34 341 aaPredicted RBP14.18□□□□□ -0.14
LSM6-203ENST00000503982 MT-ND6P03923 174 aa14.18□□□□□ -0.14
LSM6-203ENST00000503982 TCAPO15273 167 aa14.17□□□□□ -0.14
LSM6-203ENST00000503982 TSHBP01222 138 aa14.17□□□□□ -0.14
LSM6-203ENST00000503982 ESDP10768 282 aa14.17□□□□□ -0.14
LSM6-203ENST00000503982 CNBPP62633 177 aaKnown RBP14.17□□□□□ -0.14
LSM6-203ENST00000503982 TMEM101Q96IK0 257 aa14.17□□□□□ -0.14
LSM6-203ENST00000503982 FGF6P10767 208 aa14.16□□□□□ -0.14
LSM6-203ENST00000503982 SDIM1Q6ZPB5 146 aa14.16□□□□□ -0.14
LSM6-203ENST00000503982 YPEL4Q96NS1 127 aa14.16□□□□□ -0.14
LSM6-203ENST00000503982 NPYP01303 97 aa14.15□□□□□ -0.14
LSM6-203ENST00000503982 HIGD2BQ4VC39 106 aa14.15□□□□□ -0.14
LSM6-203ENST00000503982 CHCHD10Q8WYQ3 142 aaPredicted RBP14.15□□□□□ -0.14
LSM6-203ENST00000503982 PRELID3AQ96N28 172 aa14.15□□□□□ -0.14
LSM6-203ENST00000503982 SMIM2Q9BVW6 85 aa14.15□□□□□ -0.14
LSM6-203ENST00000503982 PANO1I0J062 215 aa14.14□□□□□ -0.15
LSM6-203ENST00000503982 KIR2DL4Q99706 377 aa14.14□□□□□ -0.15
LSM6-203ENST00000503982 KRTAP10-4P60372 401 aaPredicted RBP14.13□□□□□ -0.15
LSM6-203ENST00000503982 ZNF25P17030 456 aaPredicted RBP14.11□□□□□ -0.15
LSM6-203ENST00000503982 MRPL52Q86TS9 123 aaKnown RBP14.11□□□□□ -0.15
LSM6-203ENST00000503982 C15orf56Q8N910 161 aa14.11□□□□□ -0.15
LSM6-203ENST00000503982 CHTF8P0CG12 524 aa14.1□□□□□ -0.15
LSM6-203ENST00000503982 OR5A1Q8NGJ0 315 aa14.1□□□□□ -0.15
LSM6-203ENST00000503982 SMCO4Q9NRQ5 59 aa14.1□□□□□ -0.15
LSM6-203ENST00000503982 TGIF2-C20orf24A0A0A6YYL0 155 aa14.09□□□□□ -0.15
LSM6-203ENST00000503982 K7EMI3 77 aa14.09□□□□□ -0.15
LSM6-203ENST00000503982 SLPIP03973 132 aa14.09□□□□□ -0.15
LSM6-203ENST00000503982 XCL1P47992 114 aa14.09□□□□□ -0.15
LSM6-203ENST00000503982 OXTP01178 125 aa14.08□□□□□ -0.16
LSM6-203ENST00000503982 FCER1GP30273 86 aa14.08□□□□□ -0.16
LSM6-203ENST00000503982 MAP1LC3AQ9H492 121 aa14.08□□□□□ -0.16
LSM6-203ENST00000503982 CSDC2Q9Y534 153 aaKnown RBP14.08□□□□□ -0.16
LSM6-203ENST00000503982 PKHD1L1Q86WI1 4243 aa14.07□□□□□ -0.16
LSM6-203ENST00000503982 A0A087WYN8 130 aa14.06□□□□□ -0.16
LSM6-203ENST00000503982 CCL25O15444 150 aa14.06□□□□□ -0.16
LSM6-203ENST00000503982 COX6A2Q02221 97 aa14.06□□□□□ -0.16
LSM6-203ENST00000503982 SS18Q15532 418 aa14.06□□□□□ -0.16
LSM6-203ENST00000503982 MRPL18Q9H0U6 180 aaKnown RBP14.06□□□□□ -0.16
LSM6-203ENST00000503982 IGKV2-24A0A0C4DH68 120 aa14.05□□□□□ -0.16
LSM6-203ENST00000503982 SMAGPQ0VAQ4 97 aa14.05□□□□□ -0.16
LSM6-203ENST00000503982 Q8N8P6 123 aa14.05□□□□□ -0.16
LSM6-203ENST00000503982 ALKBH7Q9BT30 221 aaPredicted RBP14.05□□□□□ -0.16
LSM6-203ENST00000503982 TIMM21Q9BVV7 248 aa14.05□□□□□ -0.16
LSM6-203ENST00000503982 NXT2Q9NPJ8 142 aaKnown RBP14.05□□□□□ -0.16
LSM6-203ENST00000503982 LINC00959A0A1B0GUT2 108 aa14.04□□□□□ -0.16
LSM6-203ENST00000503982 FOXI1Q12951 378 aa14.04□□□□□ -0.16
LSM6-203ENST00000503982 CIRBPQ14011 172 aaKnown RBP14.04□□□□□ -0.16
LSM6-203ENST00000503982 MAJINQ3KP22 176 aa14.04□□□□□ -0.16
LSM6-203ENST00000503982 CBLN2Q8IUK8 224 aa14.04□□□□□ -0.16
LSM6-203ENST00000503982 SPACA4Q8TDM5 124 aa14.04□□□□□ -0.16
LSM6-203ENST00000503982 TMEM18Q96B42 140 aa14.04□□□□□ -0.16
LSM6-203ENST00000503982 LRP1Q07954 4544 aaKnown RBP14.04□□□□□ -0.16
LSM6-203ENST00000503982 FAT3Q8TDW7 4589 aa14.03□□□□□ -0.16
LSM6-203ENST00000503982 HNRNPA3P51991 378 aaKnown RBP14.03□□□□□ -0.16
LSM6-203ENST00000503982 GVQW2A0A096LPI5 108 aaPredicted RBP14.02□□□□□ -0.17
LSM6-203ENST00000503982 LINC01546A6NGU7 62 aa14.02□□□□□ -0.17
LSM6-203ENST00000503982 KIAA1644Q3SXP7 199 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms