RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 TRAV12-1A0A0B4J245 112 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 PRSS29PA6NIE9 313 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 H3BNG1 76 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 RNASE13Q5GAN3 156 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 MRPL52Q86TS9 123 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 TMEM141Q96I45 108 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 AMELXQ99217 191 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 TIMM21Q9BVV7 248 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 CST9LQ9H4G1 147 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 SPANXA1Q9NS26 97 aa4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 MRPL35Q9NZE8 188 aaKnown RBP4.76□□□□□ -1.65
TOPBP1-203ENST00000503464 TRBV25-1A0A075B6N4 114 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 DEFB131BA0A096LNP1 70 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 hDV102S1A0JD36 115 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 LINC01549A6NIU2 74 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 PRSS1P07477 247 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 FGF6P10767 208 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 G0S2P27469 103 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 Q6ZN92 141 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 ZNF664Q8N3J9 261 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 TMEM243Q9BU79 118 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 ICOSQ9Y6W8 199 aa4.75□□□□□ -1.65
TOPBP1-203ENST00000503464 CSMD3Q7Z407 3707 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 IGLV4-60A0A075B6I1 120 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 TRAV9-2A0A087WT02 112 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 C20orf202A1L168 122 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 F8VRH5 84 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 NPSP0C0P6 89 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 MRPS36P82909 103 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 GAGE6Q13070 117 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 PMVKQ15126 192 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 MRPL23Q16540 153 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 TP73-AS1Q9UF72 201 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 PAM16Q9Y3D7 125 aa4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 CSDC2Q9Y534 153 aaKnown RBP4.74□□□□□ -1.65
TOPBP1-203ENST00000503464 FBN3Q75N90 2809 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 DNAH1Q9P2D7 4330 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 TRAV10A0A0B4J240 114 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 C11orf86A6NJI1 115 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 H7C423 109 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 IGKCP01834 107 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 NHLRC4P0CG21 123 aaPredicted RBP4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 ANKRD39Q53RE8 183 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 MPV17L2Q567V2 206 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 TMEM97Q5BJF2 176 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 LYPD5Q6UWN5 251 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 STPG4Q8N801 248 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 VAMP8Q9BV40 100 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 PRO1933Q9H354 126 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 CDC42SE2Q9NRR3 84 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 CHTOPQ9Y3Y2 248 aaKnown RBP4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 STARD9Q9P2P6 4700 aa4.73□□□□□ -1.65
TOPBP1-203ENST00000503464 IGKV2D-26A0A0A0MRZ7 120 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 A0A0J9YXV3 536 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 DPM2O94777 84 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 IGLC3P0DOY3 106 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 UBE2D1P51668 147 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 TIRAPP58753 221 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 RBX1P62877 108 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 ESRGQ1W209 222 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 SPATA45Q537H7 98 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 LELP1Q5T871 98 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 NFE4Q86UQ8 179 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 CHCHD5Q9BSY4 110 aa4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 PLECQ15149 4684 aaKnown RBP4.72□□□□□ -1.65
TOPBP1-203ENST00000503464 UBE2L6O14933 153 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 ZNF22P17026 224 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 ZNF25P17030 456 aaPredicted RBP4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 PLNP26678 52 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 TCTAP57738 103 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 SH2D6Q7Z4S9 175 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 FAM19A3Q7Z5A8 133 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 WFDC10BQ8IUB3 73 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 OR5A1Q8NGJ0 315 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 CHAC1Q9BUX1 264 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 VCX2Q9H322 139 aa4.71□□□□□ -1.66
TOPBP1-203ENST00000503464 A0A1B0GUV1 79 aa4.7□□□□□ -1.66
TOPBP1-203ENST00000503464 S100A12P80511 92 aa4.7□□□□□ -1.66
TOPBP1-203ENST00000503464 COX6A2Q02221 97 aa4.7□□□□□ -1.66
TOPBP1-203ENST00000503464 PAPPA-AS1Q5QFB9 102 aa4.7□□□□□ -1.66
TOPBP1-203ENST00000503464 LINC00242Q5T6M2 205 aa4.7□□□□□ -1.66
TOPBP1-203ENST00000503464 AMMECR1LQ6DCA0 310 aa4.7□□□□□ -1.66
TOPBP1-203ENST00000503464 LYSTQ99698 3801 aa4.7□□□□□ -1.66
TOPBP1-203ENST00000503464 IGLV5-45A0A087WSX0 123 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 TINCRA0A1B0GVN0 87 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 TSPEAR-AS2P59090 65 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 PKIAP61925 76 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 DGAT2L7PQ6IED9 249 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 C14orf144Q96I85 54 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 TMEM101Q96IK0 257 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 TTTY13Q9BZ97 58 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 LINC00588Q9Y4M8 146 aa4.69□□□□□ -1.66
TOPBP1-203ENST00000503464 VPS13DQ5THJ4 4388 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 TRAV13-1A0A0B4J241 112 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 TMEM223A0PJW6 202 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 PCP4L1A6NKN8 68 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 IGLL5B9A064 214 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 TMEM262E9PQX1 116 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 CLPSL2Q6UWE3 100 aa4.68□□□□□ -1.66
TOPBP1-203ENST00000503464 PCP2Q8IVA1 136 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 145.2 ms