RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 RPS10P46783 165 aaKnown RBP5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 KRTAP10-4P60372 401 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 PEA15Q15121 130 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 ADIRFQ15847 76 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 C15orf56Q8N910 161 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 NUP35Q8NFH5 326 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 OR5A1Q8NGJ0 315 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 CHCHD10Q8WYQ3 142 aaPredicted RBP5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 TMEM101Q96IK0 257 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 TMEM242Q9NWH2 141 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 NAT8Q9UHE5 227 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 NAT8BQ9UHF3 227 aa5.44□□□□□ -1.54
HMGXB4-207ENST00000498212 TRBV27A0A0K0K1C4 114 aa5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 KRTAP29-1A8MX34 341 aaPredicted RBP5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 C9JQL5 133 aa5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 PANO1I0J062 215 aa5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 SLPIP03973 132 aa5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 POLR2KP53803 58 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 RPL37AP61513 92 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 CIRBPQ14011 172 aaKnown RBP5.43□□□□□ -1.54
HMGXB4-207ENST00000498212 LINC00959A0A1B0GUT2 108 aa5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 C7orf77A4D0Y5 90 aa5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 SMKR1H3BMG3 65 aa5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 PPP1R17O96001 155 aa5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 SRSF3P84103 164 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 HIGD2BQ4VC39 106 aa5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 MRPL52Q86TS9 123 aaKnown RBP5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 SMDT1Q9H4I9 107 aa5.42□□□□□ -1.54
HMGXB4-207ENST00000498212 SMIM27A0A1W2PRY6 76 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 VCYO14598 125 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 PPP1R2P9O14990 202 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 CCL25O15444 150 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 FCER1GP30273 86 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 XCL1P47992 114 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 SUMO2P61956 95 aaKnown RBP5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 FOXI1Q12951 378 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 SS18Q15532 418 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 DPH3Q96FX2 82 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 KIR2DL4Q99706 377 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 CDC42SE2Q9NRR3 84 aa5.41□□□□□ -1.54
HMGXB4-207ENST00000498212 MYCBP2O75592 4640 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 GVQW2A0A096LPI5 108 aaPredicted RBP5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 A0A1B0GW15 77 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 CHTF8P0CG12 524 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 CAMPP49913 170 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 COX6A2Q02221 97 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 SMAGPQ0VAQ4 97 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 MRPL51Q4U2R6 128 aaKnown RBP5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 FAM104BQ5XKR9 115 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 ZNF664Q8N3J9 261 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 NRACQ8N912 160 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 SPACA4Q8TDM5 124 aa5.4□□□□□ -1.54
HMGXB4-207ENST00000498212 DMBT1Q9UGM3 2413 aaPredicted RBP5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 A0A087WYN8 130 aa5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 IGHV1-58A0A0C4DH39 117 aa5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 LINC00862A6NCI5 91 aa5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 CKS2P33552 79 aa5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 TMEM18Q96B42 140 aa5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 UBE2D4Q9Y2X8 147 aa5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 CSDC2Q9Y534 153 aaKnown RBP5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 HERC1Q15751 4861 aa5.39□□□□□ -1.55
HMGXB4-207ENST00000498212 TRBV24-1A0A075B6N3 115 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 F8W036 122 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 OXTP01178 125 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 S100A8P05109 93 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 HBBP68871 147 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 MRPL54Q6P161 138 aaKnown RBP5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 CD164L2Q6UWJ8 174 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 PRSS3P2Q8NHM4 247 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 C20orf78Q9BR46 151 aa5.38□□□□□ -1.55
HMGXB4-207ENST00000498212 IGKV2-24A0A0C4DH68 120 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 A0A1B0GXF2 115 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 C1orf196B1AJZ1 125 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 D6R8Y8 96 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 ZNF561-AS1K7EIQ3 104 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 TCAPO15273 167 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 TNFRSF6BO95407 300 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 HNRNPA3P51991 378 aaKnown RBP5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 RPL32P62910 135 aaKnown RBP5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 MAJINQ3KP22 176 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 RNASE13Q5GAN3 156 aaKnown RBP5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 TIMM21Q9BVV7 248 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 PLAC8Q9NZF1 115 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 PKIGQ9Y2B9 76 aa5.37□□□□□ -1.55
HMGXB4-207ENST00000498212 A0A096LNI7 61 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 MALP21145 153 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 Q6ZUT4 128 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 STPG4Q8N801 248 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 C7orf33Q8WU49 177 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 LINC00526Q96FQ7 95 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 SMIM2Q9BVW6 85 aa5.36□□□□□ -1.55
HMGXB4-207ENST00000498212 TRAV13-1A0A0B4J241 112 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 COX7A2LO14548 114 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 PHOX2AO14813 284 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 GHRHP01286 108 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 NPYP01303 97 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 PPBPP02775 128 aa5.35□□□□□ -1.55
HMGXB4-207ENST00000498212 RPL39P62891 51 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms