RNA–Protein interactions for RNA: ENST00000497822.5

C1orf61-223, Transcript of chromosome 1 open reading frame 61, human

TSL 2

Gene C1orf61, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C1orf61-223	ENST00000497822	ZNF25	P17030	456 aa	Predicted RBP	12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	RAB4A	P20338	218 aa		12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	POLR2K	P53803	58 aa	Known RBP	12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	CT83	Q5H943	113 aa		12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	LINC01551	Q86U37	167 aa		12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	AMN1	Q8IY45	258 aa		12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	TMEM101	Q96IK0	257 aa		12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	BTF3L4	Q96K17	158 aa		12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822	SMIM7	Q9BQ49	75 aa		12.06	□□□□□ -0.48
C1orf61-223	ENST00000497822		A0A1B0GUT8	65 aa		12.05	□□□□□ -0.48
C1orf61-223	ENST00000497822	PRR3	P79522	188 aa	Known RBP	12.05	□□□□□ -0.48
C1orf61-223	ENST00000497822	TSKU	Q8WUA8	353 aa		12.05	□□□□□ -0.48
C1orf61-223	ENST00000497822	TMEM191A	Q9H0A3	160 aa		12.05	□□□□□ -0.48
C1orf61-223	ENST00000497822	CDC42SE2	Q9NRR3	84 aa		12.05	□□□□□ -0.48
C1orf61-223	ENST00000497822	BORCS7	Q96B45	105 aa		12.04	□□□□□ -0.48
C1orf61-223	ENST00000497822	MRAP2	Q96G30	205 aa		12.04	□□□□□ -0.48
C1orf61-223	ENST00000497822	EIF5A2	Q9GZV4	153 aa	Known RBP	12.04	□□□□□ -0.48
C1orf61-223	ENST00000497822	IGHV1-58	A0A0C4DH39	117 aa		12.03	□□□□□ -0.48
C1orf61-223	ENST00000497822	ZNF664	Q8N3J9	261 aa		12.03	□□□□□ -0.48
C1orf61-223	ENST00000497822	LRP2	P98164	4655 aa		12.02	□□□□□ -0.48
C1orf61-223	ENST00000497822	TRBV27	A0A0K0K1C4	114 aa		12.02	□□□□□ -0.49
C1orf61-223	ENST00000497822	SRP19	P09132	144 aa	Known RBP	12.02	□□□□□ -0.49
C1orf61-223	ENST00000497822	MRPL52	Q86TS9	123 aa	Known RBP	12.02	□□□□□ -0.49
C1orf61-223	ENST00000497822	CARD19	Q96LW7	228 aa		12.02	□□□□□ -0.49
C1orf61-223	ENST00000497822	OSTC	Q9NRP0	149 aa		12.02	□□□□□ -0.49
C1orf61-223	ENST00000497822	ZNF727	A8MUV8	499 aa		12.01	□□□□□ -0.49
C1orf61-223	ENST00000497822	SS18	Q15532	418 aa		12.01	□□□□□ -0.49
C1orf61-223	ENST00000497822	RNASE13	Q5GAN3	156 aa	Known RBP	12.01	□□□□□ -0.49
C1orf61-223	ENST00000497822	CD164L2	Q6UWJ8	174 aa		12.01	□□□□□ -0.49
C1orf61-223	ENST00000497822	C7orf77	A4D0Y5	90 aa		12	□□□□□ -0.49
C1orf61-223	ENST00000497822	NRAC	Q8N912	160 aa		12	□□□□□ -0.49
C1orf61-223	ENST00000497822	NUP35	Q8NFH5	326 aa		12	□□□□□ -0.49
C1orf61-223	ENST00000497822		V9GYV3	84 aa		12	□□□□□ -0.49
C1orf61-223	ENST00000497822	SYCN	Q0VAF6	134 aa		11.99	□□□□□ -0.49
C1orf61-223	ENST00000497822	LINC01600	Q96MT4	127 aa		11.99	□□□□□ -0.49
C1orf61-223	ENST00000497822	FAM210A	Q96ND0	272 aa		11.99	□□□□□ -0.49
C1orf61-223	ENST00000497822	ZNF561-AS1	K7EIQ3	104 aa		11.98	□□□□□ -0.49
C1orf61-223	ENST00000497822	VCY	O14598	125 aa		11.98	□□□□□ -0.49
C1orf61-223	ENST00000497822	IGLV4-69	A0A075B6H9	119 aa		11.97	□□□□□ -0.49
C1orf61-223	ENST00000497822	RNF213	Q63HN8	5207 aa		11.97	□□□□□ -0.49
C1orf61-223	ENST00000497822		C9JQL5	133 aa		11.96	□□□□□ -0.49
C1orf61-223	ENST00000497822	FCER1G	P30273	86 aa		11.96	□□□□□ -0.49
C1orf61-223	ENST00000497822	CAMP	P49913	170 aa		11.96	□□□□□ -0.49
C1orf61-223	ENST00000497822	GAGE2B	Q13066	116 aa		11.96	□□□□□ -0.49
C1orf61-223	ENST00000497822	RIG	Q13278	110 aa		11.96	□□□□□ -0.49
C1orf61-223	ENST00000497822	LINC00474	Q9P2X8	69 aa		11.96	□□□□□ -0.49
C1orf61-223	ENST00000497822	UBE2D4	Q9Y2X8	147 aa		11.96	□□□□□ -0.49
C1orf61-223	ENST00000497822	TRAV13-1	A0A0B4J241	112 aa		11.95	□□□□□ -0.5
C1orf61-223	ENST00000497822	SUMO2	P61956	95 aa	Known RBP	11.95	□□□□□ -0.5
C1orf61-223	ENST00000497822	MRPL51	Q4U2R6	128 aa	Known RBP	11.95	□□□□□ -0.5
C1orf61-223	ENST00000497822	ISOC2	Q96AB3	205 aa		11.95	□□□□□ -0.5
C1orf61-223	ENST00000497822		A0A1W2PNN7	141 aa		11.94	□□□□□ -0.5
C1orf61-223	ENST00000497822	COX7A2L	O14548	114 aa		11.94	□□□□□ -0.5
C1orf61-223	ENST00000497822	PTTG1IP	P53801	180 aa		11.94	□□□□□ -0.5
C1orf61-223	ENST00000497822	SRSF9	Q13242	221 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
C1orf61-223	ENST00000497822	C5orf38	Q86SI9	138 aa		11.94	□□□□□ -0.5
C1orf61-223	ENST00000497822	C1orf196	B1AJZ1	125 aa		11.93	□□□□□ -0.5
C1orf61-223	ENST00000497822	MAL	P21145	153 aa		11.93	□□□□□ -0.5
C1orf61-223	ENST00000497822	RPL23	P62829	140 aa	Known RBP	11.93	□□□□□ -0.5
C1orf61-223	ENST00000497822	TMEM241	Q24JQ0	296 aa		11.93	□□□□□ -0.5
C1orf61-223	ENST00000497822		Q6ZUT4	128 aa		11.93	□□□□□ -0.5
C1orf61-223	ENST00000497822	KRTAP10-8	P60410	259 aa		11.92	□□□□□ -0.5
C1orf61-223	ENST00000497822	FAM104B	Q5XKR9	115 aa		11.92	□□□□□ -0.5
C1orf61-223	ENST00000497822		A0A0J9YXV3	536 aa		11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	LOC107984640	A0A0U1RRK4	108 aa		11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	SRSF3	P84103	164 aa	Known RBP	11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	ADIRF	Q15847	76 aa		11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	SPINK6	Q6UWN8	80 aa		11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	FAM104A	Q969W3	186 aa		11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	NAT8B	Q9UHF3	227 aa		11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	CSDC2	Q9Y534	153 aa	Known RBP	11.91	□□□□□ -0.5
C1orf61-223	ENST00000497822	RPL39	P62891	51 aa	Known RBP	11.9	□□□□□ -0.5
C1orf61-223	ENST00000497822		Q6ZRP5	223 aa		11.9	□□□□□ -0.5
C1orf61-223	ENST00000497822	CAMK2N2	Q96S95	79 aa		11.9	□□□□□ -0.5
C1orf61-223	ENST00000497822	KIR2DL4	Q99706	377 aa		11.9	□□□□□ -0.5
C1orf61-223	ENST00000497822	OPRPN	Q99935	248 aa	Predicted RBP	11.9	□□□□□ -0.5
C1orf61-223	ENST00000497822	FAM74A3	Q4VXF1	159 aa		11.89	□□□□□ -0.51
C1orf61-223	ENST00000497822	PKIG	Q9Y2B9	76 aa		11.89	□□□□□ -0.51
C1orf61-223	ENST00000497822	SMIM27	A0A1W2PRY6	76 aa		11.88	□□□□□ -0.51
C1orf61-223	ENST00000497822	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	11.88	□□□□□ -0.51
C1orf61-223	ENST00000497822	PPP1R17	O96001	155 aa		11.88	□□□□□ -0.51
C1orf61-223	ENST00000497822	APOM	O95445	188 aa		11.87	□□□□□ -0.51
C1orf61-223	ENST00000497822	TIMM21	Q9BVV7	248 aa		11.87	□□□□□ -0.51
C1orf61-223	ENST00000497822	PPP1R2P9	O14990	202 aa		11.86	□□□□□ -0.51
C1orf61-223	ENST00000497822	CKS2	P33552	79 aa		11.86	□□□□□ -0.51
C1orf61-223	ENST00000497822	C9orf116	Q5BN46	136 aa	Predicted RBP	11.86	□□□□□ -0.51
C1orf61-223	ENST00000497822	REG3G	Q6UW15	175 aa		11.86	□□□□□ -0.51
C1orf61-223	ENST00000497822	C2orf48	Q96LS8	159 aa		11.86	□□□□□ -0.51
C1orf61-223	ENST00000497822	NAT8	Q9UHE5	227 aa		11.86	□□□□□ -0.51
C1orf61-223	ENST00000497822	TRBV24-1	A0A075B6N3	115 aa		11.85	□□□□□ -0.51
C1orf61-223	ENST00000497822	TNFRSF6B	O95407	300 aa		11.85	□□□□□ -0.51
C1orf61-223	ENST00000497822	RPL18A	Q02543	176 aa	Known RBP	11.85	□□□□□ -0.51
C1orf61-223	ENST00000497822	SPAG11B	Q08648	103 aa		11.85	□□□□□ -0.51
C1orf61-223	ENST00000497822	MRPL54	Q6P161	138 aa	Known RBP	11.85	□□□□□ -0.51
C1orf61-223	ENST00000497822	C20orf78	Q9BR46	151 aa		11.85	□□□□□ -0.51
C1orf61-223	ENST00000497822	PSORS1C2	Q9UIG4	136 aa		11.85	□□□□□ -0.51
C1orf61-223	ENST00000497822	SMAGP	Q0VAQ4	97 aa		11.84	□□□□□ -0.51
C1orf61-223	ENST00000497822	PHF5A	Q7RTV0	110 aa	Known RBP	11.84	□□□□□ -0.51
C1orf61-223	ENST00000497822	LINC00862	A6NCI5	91 aa		11.83	□□□□□ -0.52
C1orf61-223	ENST00000497822		D6R8Y8	96 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms