RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 SUMO2P61956 95 aaKnown RBP7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 CLLU1Q5K131 121 aa7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 C15orf56Q8N910 161 aa7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 OR5A1Q8NGJ0 315 aa7.01□□□□□ -1.29
SHROOM3-210ENST00000497440 HLA-DQA1P01909 254 aa7□□□□□ -1.29
SHROOM3-210ENST00000497440 INAFM2P0DMQ5 153 aa7□□□□□ -1.29
SHROOM3-210ENST00000497440 IFITM2Q01629 132 aa7□□□□□ -1.29
SHROOM3-210ENST00000497440 PNRC1Q12796 327 aaPredicted RBP7□□□□□ -1.29
SHROOM3-210ENST00000497440 FAM104AQ969W3 186 aa7□□□□□ -1.29
SHROOM3-210ENST00000497440 TMEM242Q9NWH2 141 aa7□□□□□ -1.29
SHROOM3-210ENST00000497440 PRSS47A8MTI9 375 aa6.99□□□□□ -1.29
SHROOM3-210ENST00000497440 SMKR1H3BMG3 65 aa6.99□□□□□ -1.29
SHROOM3-210ENST00000497440 PHOX2AO14813 284 aa6.99□□□□□ -1.29
SHROOM3-210ENST00000497440 PPP1R2P9O14990 202 aa6.99□□□□□ -1.29
SHROOM3-210ENST00000497440 FOXI1Q12951 378 aa6.99□□□□□ -1.29
SHROOM3-210ENST00000497440 ATP5L2Q7Z4Y8 100 aa6.99□□□□□ -1.29
SHROOM3-210ENST00000497440 TIMM21Q9BVV7 248 aa6.99□□□□□ -1.29
SHROOM3-210ENST00000497440 LINC00959A0A1B0GUT2 108 aa6.98□□□□□ -1.29
SHROOM3-210ENST00000497440 C7orf77A4D0Y5 90 aa6.98□□□□□ -1.29
SHROOM3-210ENST00000497440 PANO1I0J062 215 aa6.98□□□□□ -1.29
SHROOM3-210ENST00000497440 CAMPP49913 170 aa6.98□□□□□ -1.29
SHROOM3-210ENST00000497440 CHCHD10Q8WYQ3 142 aaPredicted RBP6.98□□□□□ -1.29
SHROOM3-210ENST00000497440 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
SHROOM3-210ENST00000497440 TNXBP22105 4242 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 GVQW2A0A096LPI5 108 aaPredicted RBP6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 GAGE12HA6NDE8 117 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 CCL25O15444 150 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 TNFRSF6BO95407 300 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 PPBPP02775 128 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 S100A8P05109 93 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 HBBP68871 147 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 AMMECR1LQ6DCA0 310 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 ZNF664Q8N3J9 261 aa6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.97□□□□□ -1.29
SHROOM3-210ENST00000497440 RAB14P61106 215 aa6.96□□□□□ -1.3
SHROOM3-210ENST00000497440 RNASEKQ6P5S7 137 aaKnown RBP6.96□□□□□ -1.3
SHROOM3-210ENST00000497440 CFAP161Q6P656 301 aa6.96□□□□□ -1.3
SHROOM3-210ENST00000497440 LINC00528Q8N1L1 170 aa6.96□□□□□ -1.3
SHROOM3-210ENST00000497440 ANAPC16Q96DE5 110 aa6.96□□□□□ -1.3
SHROOM3-210ENST00000497440 HMCN2Q8NDA2 5059 aa6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 F8W036 122 aa6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 TCAPO15273 167 aa6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 CKS2P33552 79 aa6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 MRPL54Q6P161 138 aaKnown RBP6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 CD164L2Q6UWJ8 174 aa6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 BTF3L4Q96K17 158 aa6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 KIR2DL4Q99706 377 aa6.95□□□□□ -1.3
SHROOM3-210ENST00000497440 hDV102S1A0JD36 115 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 D6R8Y8 96 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 NPYP01303 97 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 PLA2G1BP04054 148 aaKnown RBP6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 ADCYAP1P18509 176 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 UQCC3Q6UW78 93 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 TMEM101Q96IK0 257 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 IMMP2LQ96T52 175 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 SMIM2Q9BVW6 85 aa6.94□□□□□ -1.3
SHROOM3-210ENST00000497440 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.93□□□□□ -1.3
SHROOM3-210ENST00000497440 TMEM218A2RU14 115 aa6.93□□□□□ -1.3
SHROOM3-210ENST00000497440 C1orf196B1AJZ1 125 aa6.93□□□□□ -1.3
SHROOM3-210ENST00000497440 MT-ND4LP03901 98 aa6.93□□□□□ -1.3
SHROOM3-210ENST00000497440 MRPS36P82909 103 aaKnown RBP6.93□□□□□ -1.3
SHROOM3-210ENST00000497440 TMEM136Q6ZRR5 245 aa6.93□□□□□ -1.3
SHROOM3-210ENST00000497440 IGHV3-64A0A075B6Q5 118 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 FCER1GP30273 86 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 SMAGPQ0VAQ4 97 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 C10orf91Q5T1B1 145 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 ORMDL3Q8N138 153 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 SPACA4Q8TDM5 124 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 AP5S1Q9NUS5 200 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 PLAC8Q9NZF1 115 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 PYGO1Q9Y3Y4 419 aa6.92□□□□□ -1.3
SHROOM3-210ENST00000497440 IGHV1-58A0A0C4DH39 117 aa6.91□□□□□ -1.3
SHROOM3-210ENST00000497440 IGKV3OR2-268A0A0C4DH90 116 aa6.91□□□□□ -1.3
SHROOM3-210ENST00000497440 KRTAP29-1A8MX34 341 aaPredicted RBP6.91□□□□□ -1.3
SHROOM3-210ENST00000497440 XCL1P47992 114 aa6.91□□□□□ -1.3
SHROOM3-210ENST00000497440 SS18Q15532 418 aa6.91□□□□□ -1.3
SHROOM3-210ENST00000497440 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 RPL39P62891 51 aaKnown RBP6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 Q6ZUT4 128 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 PRSS3P2Q8NHM4 247 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 TMEM18Q96B42 140 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 PRELID3AQ96N28 172 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 SEC11CQ9BY50 192 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 CTDSP1Q9GZU7 261 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 SPANXA1Q9NS26 97 aa6.9□□□□□ -1.3
SHROOM3-210ENST00000497440 TRAV9-1A0A075B6T8 112 aa6.89□□□□□ -1.31
SHROOM3-210ENST00000497440 A0A087WYN8 130 aa6.89□□□□□ -1.31
SHROOM3-210ENST00000497440 COX6A2Q02221 97 aa6.89□□□□□ -1.31
SHROOM3-210ENST00000497440 HIGD2BQ4VC39 106 aa6.89□□□□□ -1.31
SHROOM3-210ENST00000497440 K7EMI3 77 aa6.88□□□□□ -1.31
SHROOM3-210ENST00000497440 CHTF8P0CG12 524 aa6.88□□□□□ -1.31
SHROOM3-210ENST00000497440 C2orf48Q96LS8 159 aa6.88□□□□□ -1.31
SHROOM3-210ENST00000497440 COX7A2LO14548 114 aa6.87□□□□□ -1.31
SHROOM3-210ENST00000497440 NPSP0C0P6 89 aa6.87□□□□□ -1.31
SHROOM3-210ENST00000497440 Q8N8P6 123 aa6.87□□□□□ -1.31
SHROOM3-210ENST00000497440 OPRPNQ99935 248 aaPredicted RBP6.87□□□□□ -1.31
SHROOM3-210ENST00000497440 IGIPA6NJ69 53 aa6.86□□□□□ -1.31
SHROOM3-210ENST00000497440 HNRNPA3P51991 378 aaKnown RBP6.86□□□□□ -1.31
SHROOM3-210ENST00000497440 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms