RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 IGKV2-29A2NJV5 120 aaPredicted RBP3.43□□□□□ -1.86
UBE3C-208ENST00000497368 PHOX2AO14813 284 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 TSHBP01222 138 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 ESDP10768 282 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 RPS10P46783 165 aaKnown RBP3.43□□□□□ -1.86
UBE3C-208ENST00000497368 GNG4P50150 75 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 CACNG7P62955 275 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 TMEM97Q5BJF2 176 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 LYPD6BQ8NI32 183 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 OCC1Q8TAD7 63 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 FAM104AQ969W3 186 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 RNF185Q96GF1 192 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 TMEM243Q9BU79 118 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 RPP21Q9H633 154 aaKnown RBP3.43□□□□□ -1.86
UBE3C-208ENST00000497368 NIT2Q9NQR4 276 aa3.43□□□□□ -1.86
UBE3C-208ENST00000497368 MUC17Q685J3 4493 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 TRBV6-5A0A0K0K1A5 114 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 hDV102S1A0JD36 115 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 PDE6DO43924 150 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 P01737 135 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 AMTP48728 403 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 RAB5CP51148 216 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 RPS20P60866 119 aaKnown RBP3.42□□□□□ -1.86
UBE3C-208ENST00000497368 PKIAP61925 76 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 PRR3P79522 188 aaKnown RBP3.42□□□□□ -1.86
UBE3C-208ENST00000497368 HIGD2BQ4VC39 106 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 WDR73Q6P4I2 378 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 TMEM18Q96B42 140 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 LINC00526Q96FQ7 95 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 CTDSP1Q9GZU7 261 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 MED9Q9NWA0 146 aa3.42□□□□□ -1.86
UBE3C-208ENST00000497368 IGHV3-64A0A075B6Q5 118 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 TRAV8-4A0A0B4J246 113 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 F2Z2F3 143 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 IFNA1P01562 189 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 TRGC1P0CF51 173 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 SMIM17P0DL12 118 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 KRTAP10-6P60371 365 aaPredicted RBP3.41□□□□□ -1.86
UBE3C-208ENST00000497368 COX6A2Q02221 97 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 FAM231DQ6ZW35 169 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 SLC51BQ86UW2 128 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 CHCHD10Q8WYQ3 142 aaPredicted RBP3.41□□□□□ -1.86
UBE3C-208ENST00000497368 TMEM242Q9NWH2 141 aa3.41□□□□□ -1.86
UBE3C-208ENST00000497368 SDHAF1A6NFY7 115 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 C9JQL5 133 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 SMKR1H3BMG3 65 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 H7C1H1 209 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 NCR2O95944 276 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 FGF6P10767 208 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 POLR2KP53803 58 aaKnown RBP3.4□□□□□ -1.87
UBE3C-208ENST00000497368 EIF5AP63241 154 aaKnown RBP3.4□□□□□ -1.87
UBE3C-208ENST00000497368 COTL1Q14019 142 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 SERTAD4-AS1Q5TG53 156 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 KCNIP4Q6PIL6 250 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 ALKAL2Q6UX46 152 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 Q6ZRU5 148 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 KRTAP11-1Q8IUC1 163 aa3.4□□□□□ -1.87
UBE3C-208ENST00000497368 IGKV2-24A0A0C4DH68 120 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 IGKV3OR2-268A0A0C4DH90 116 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 LINC00959A0A1B0GUT2 108 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 TMEM250H0YL14 139 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 APCSP02743 223 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 SRP19P09132 144 aaKnown RBP3.39□□□□□ -1.87
UBE3C-208ENST00000497368 KRTAP10-8P60410 259 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 LINC01551Q86U37 167 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 OR5A1Q8NGJ0 315 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 V9GYV3 84 aa3.39□□□□□ -1.87
UBE3C-208ENST00000497368 TRBV27A0A0K0K1C4 114 aa3.38□□□□□ -1.87
UBE3C-208ENST00000497368 CCL25O15444 150 aa3.38□□□□□ -1.87
UBE3C-208ENST00000497368 GATCO43716 136 aaKnown RBP3.38□□□□□ -1.87
UBE3C-208ENST00000497368 NDUFS6O75380 124 aaKnown RBP3.38□□□□□ -1.87
UBE3C-208ENST00000497368 RAB4AP20338 218 aa3.38□□□□□ -1.87
UBE3C-208ENST00000497368 KRTAP10-7P60409 375 aaPredicted RBP3.38□□□□□ -1.87
UBE3C-208ENST00000497368 SRSF9Q13242 221 aaKnown RBP eCLIP3.38□□□□□ -1.87
UBE3C-208ENST00000497368 RNASE13Q5GAN3 156 aaKnown RBP3.38□□□□□ -1.87
UBE3C-208ENST00000497368 Q6ZUT4 128 aa3.38□□□□□ -1.87
UBE3C-208ENST00000497368 MRPL52Q86TS9 123 aaKnown RBP3.38□□□□□ -1.87
UBE3C-208ENST00000497368 AMN1Q8IY45 258 aa3.38□□□□□ -1.87
UBE3C-208ENST00000497368 LINC01600Q96MT4 127 aa3.38□□□□□ -1.87
UBE3C-208ENST00000497368 CDC42SE2Q9NRR3 84 aa3.38□□□□□ -1.87
UBE3C-208ENST00000497368 A0A1W2PNN7 141 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 XKRY2A2RUG3 117 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 HIGD1CA8MV81 97 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.37□□□□□ -1.87
UBE3C-208ENST00000497368 TEX46H3BTG2 121 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 H7C423 109 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 I3L3M4 83 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 UBE2L6O14933 153 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 ZNF25P17030 456 aaPredicted RBP3.37□□□□□ -1.87
UBE3C-208ENST00000497368 XCL1P47992 114 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 MAJINQ3KP22 176 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 RNASEKQ6P5S7 137 aaKnown RBP3.37□□□□□ -1.87
UBE3C-208ENST00000497368 STPG4Q8N801 248 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 NUP35Q8NFH5 326 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 TSKUQ8WUA8 353 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 ISOC2Q96AB3 205 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 FAM210AQ96ND0 272 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 TMEM191AQ9H0A3 160 aa3.37□□□□□ -1.87
UBE3C-208ENST00000497368 UBE2D4Q9Y2X8 147 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms