RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 IGKV2-29A2NJV5 120 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-215ENST00000497139 SMIM1B2RUZ4 78 aa9.38□□□□□ -0.91
VEGFA-215ENST00000497139 RP1L1Q8IWN7 2480 aaPredicted RBP9.38□□□□□ -0.91
VEGFA-215ENST00000497139 NCOR2Q9Y618 2525 aa9.37□□□□□ -0.91
VEGFA-215ENST00000497139 NACAE9PAV3 2078 aa9.37□□□□□ -0.91
VEGFA-215ENST00000497139 TRAV12-2A0A075B6T6 113 aa9.37□□□□□ -0.91
VEGFA-215ENST00000497139 TRBV10-3A0A0K0K1G6 114 aa9.37□□□□□ -0.91
VEGFA-215ENST00000497139 LY6HO94772 140 aa9.37□□□□□ -0.91
VEGFA-215ENST00000497139 CHD8Q9HCK8 2581 aa9.37□□□□□ -0.91
VEGFA-215ENST00000497139 PFN2P35080 140 aa9.37□□□□□ -0.91
VEGFA-215ENST00000497139 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.37□□□□□ -0.91
VEGFA-215ENST00000497139 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
VEGFA-215ENST00000497139 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
VEGFA-215ENST00000497139 LINC00242Q5T6M2 205 aa9.36□□□□□ -0.91
VEGFA-215ENST00000497139 TPRP12270 2363 aaKnown RBP9.36□□□□□ -0.91
VEGFA-215ENST00000497139 RBMY1BA6NDE4 496 aaKnown RBP9.36□□□□□ -0.91
VEGFA-215ENST00000497139 RBMY1EA6NEQ0 496 aaKnown RBP9.36□□□□□ -0.91
VEGFA-215ENST00000497139 RBMY1DP0C7P1 496 aaKnown RBP9.36□□□□□ -0.91
VEGFA-215ENST00000497139 RBMY1A1P0DJD3 496 aaKnown RBP9.36□□□□□ -0.91
VEGFA-215ENST00000497139 RBMY1CP0DJD4 496 aa9.36□□□□□ -0.91
VEGFA-215ENST00000497139 RBMY1FQ15415 496 aaKnown RBP9.36□□□□□ -0.91
VEGFA-215ENST00000497139 DGAT2L7PQ6IED9 249 aa9.36□□□□□ -0.91
VEGFA-215ENST00000497139 C11orf71Q6IPW1 123 aa9.36□□□□□ -0.91
VEGFA-215ENST00000497139 CCKP06307 115 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 COX6A2Q02221 97 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 TMEM243Q9BU79 118 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 ATMQ13315 3056 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 PTPRQQ9UMZ3 2332 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 IGHV3OR16-12A0A075B7B8 117 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 GHRHP01286 108 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 FBXL19-AS1Q494R0 122 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 C10orf105Q8TEF2 133 aa9.35□□□□□ -0.91
VEGFA-215ENST00000497139 SPINK13Q1W4C9 94 aa9.34□□□□□ -0.91
VEGFA-215ENST00000497139 LYPD5Q6UWN5 251 aa9.34□□□□□ -0.91
VEGFA-215ENST00000497139 LINC01560Q8TB33 94 aa9.34□□□□□ -0.91
VEGFA-215ENST00000497139 A0A087WYN8 130 aa9.33□□□□□ -0.92
VEGFA-215ENST00000497139 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
VEGFA-215ENST00000497139 RS1O15537 224 aa9.33□□□□□ -0.92
VEGFA-215ENST00000497139 IGHV3-53P01767 116 aa9.33□□□□□ -0.92
VEGFA-215ENST00000497139 K7EQG2 157 aa9.33□□□□□ -0.92
VEGFA-215ENST00000497139 IGHV3-11P01762 117 aa9.33□□□□□ -0.92
VEGFA-215ENST00000497139 HOXD3P31249 432 aaPredicted RBP9.33□□□□□ -0.92
VEGFA-215ENST00000497139 LINC00337Q8N6G1 96 aa9.33□□□□□ -0.92
VEGFA-215ENST00000497139 PROK1P58294 105 aa9.32□□□□□ -0.92
VEGFA-215ENST00000497139 C9orf129Q5T035 196 aaKnown RBP9.32□□□□□ -0.92
VEGFA-215ENST00000497139 SMIM11BQ8TCY0 68 aa9.32□□□□□ -0.92
VEGFA-215ENST00000497139 IGHV3-73A0A0B4J1V6 119 aa9.32□□□□□ -0.92
VEGFA-215ENST00000497139 F8WDY8 70 aa9.32□□□□□ -0.92
VEGFA-215ENST00000497139 TACC2O95359 2948 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 JMJD7-PLA2G4BH0Y9G9 81 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 IGKV2-28A0A075B6P5 120 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 IGKV2D-28P01615 120 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 IGLV1-40P01703 118 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 SPTA1P02549 2419 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 XCL1P47992 114 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 ORMDL1Q9P0S3 153 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 XCL2Q9UBD3 114 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 BSNQ9UPA5 3926 aa9.31□□□□□ -0.92
VEGFA-215ENST00000497139 PCNX1Q96RV3 2341 aa9.3□□□□□ -0.92
VEGFA-215ENST00000497139 IGKV3-20P01619 116 aa9.3□□□□□ -0.92
VEGFA-215ENST00000497139 TLN1Q9Y490 2541 aaKnown RBP9.3□□□□□ -0.92
VEGFA-215ENST00000497139 TRAV7A0A075B6U4 112 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 NCR3O14931 201 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 LECT2O14960 151 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 Q6ZSN1 163 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 SMIM26A0A096LP01 95 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 LINC00167Q96N53 147 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 ATRXP46100 2492 aa9.28□□□□□ -0.92
VEGFA-215ENST00000497139 A8MTW9 85 aa9.27□□□□□ -0.93
VEGFA-215ENST00000497139 H7BZZ5 65 aa9.27□□□□□ -0.93
VEGFA-215ENST00000497139 J3QLI3 93 aa9.27□□□□□ -0.93
VEGFA-215ENST00000497139 KLKP1Q107X0 134 aa9.27□□□□□ -0.93
VEGFA-215ENST00000497139 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.93
VEGFA-215ENST00000497139 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
VEGFA-215ENST00000497139 NBASA2RRP1 2371 aa9.26□□□□□ -0.93
VEGFA-215ENST00000497139 KNCNA6PVL3 124 aa9.26□□□□□ -0.93
VEGFA-215ENST00000497139 Q9UF83 564 aa9.26□□□□□ -0.93
VEGFA-215ENST00000497139 TRAV23DV6A0A075B6W5 121 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 IGHV3-38A0A0C4DH36 116 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 HILS1P60008 231 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 SS18Q15532 418 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 EDN2P20800 178 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 ATP5EP56381 51 aaPredicted RBP9.25□□□□□ -0.93
VEGFA-215ENST00000497139 CFHR3Q02985 330 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 UBL5Q9BZL1 73 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 LY6G6DO95868 133 aa9.25□□□□□ -0.93
VEGFA-215ENST00000497139 COX7B2Q8TF08 81 aa9.24□□□□□ -0.93
VEGFA-215ENST00000497139 RPL36AP83881 106 aaKnown RBP9.24□□□□□ -0.93
VEGFA-215ENST00000497139 RPL36ALQ969Q0 106 aaKnown RBP9.24□□□□□ -0.93
VEGFA-215ENST00000497139 CDC42SE2Q9NRR3 84 aa9.24□□□□□ -0.93
VEGFA-215ENST00000497139 IBA57-AS1B1ANH7 110 aa9.23□□□□□ -0.93
VEGFA-215ENST00000497139 NDUFC1O43677 76 aa9.23□□□□□ -0.93
VEGFA-215ENST00000497139 LMO4P61968 165 aa9.23□□□□□ -0.93
VEGFA-215ENST00000497139 TMEM256-PLSCR3K7ERE1 68 aa9.23□□□□□ -0.93
VEGFA-215ENST00000497139 GRNP28799 593 aaKnown RBP9.23□□□□□ -0.93
VEGFA-215ENST00000497139 ENHOQ6UWT2 76 aa9.23□□□□□ -0.93
VEGFA-215ENST00000497139 C1orf43Q9BWL3 253 aa9.23□□□□□ -0.93
VEGFA-215ENST00000497139 C16orf95Q9H693 158 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms