RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 OR5A1Q8NGJ0 315 aa10.45□□□□□ -0.74
DNMT3A-215ENST00000496570 CHCHD10Q8WYQ3 142 aaPredicted RBP10.45□□□□□ -0.74
DNMT3A-215ENST00000496570 SMIM2Q9BVW6 85 aa10.45□□□□□ -0.74
DNMT3A-215ENST00000496570 SEC11CQ9BY50 192 aa10.45□□□□□ -0.74
DNMT3A-215ENST00000496570 UBE2D4Q9Y2X8 147 aa10.45□□□□□ -0.74
DNMT3A-215ENST00000496570 PHOX2AO14813 284 aa10.44□□□□□ -0.74
DNMT3A-215ENST00000496570 PPBPP02775 128 aa10.44□□□□□ -0.74
DNMT3A-215ENST00000496570 FCER1GP30273 86 aa10.44□□□□□ -0.74
DNMT3A-215ENST00000496570 C10orf91Q5T1B1 145 aa10.44□□□□□ -0.74
DNMT3A-215ENST00000496570 C15orf56Q8N910 161 aa10.44□□□□□ -0.74
DNMT3A-215ENST00000496570 FAM104AQ969W3 186 aa10.44□□□□□ -0.74
DNMT3A-215ENST00000496570 KIR2DL4Q99706 377 aa10.44□□□□□ -0.74
DNMT3A-215ENST00000496570 LINC00959A0A1B0GUT2 108 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 SMR3BP02814 79 aaPredicted RBP10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 SLPIP03973 132 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 FOXI1Q12951 378 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 TMEM136Q6ZRR5 245 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 ORMDL3Q8N138 153 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 TMEM101Q96IK0 257 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 BTF3L4Q96K17 158 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 IMMP2LQ96T52 175 aa10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 CSDC2Q9Y534 153 aaKnown RBP10.43□□□□□ -0.74
DNMT3A-215ENST00000496570 DGAT2L7PQ6IED9 249 aa10.42□□□□□ -0.74
DNMT3A-215ENST00000496570 ZNF664Q8N3J9 261 aa10.42□□□□□ -0.74
DNMT3A-215ENST00000496570 CLRN3Q8NCR9 226 aa10.42□□□□□ -0.74
DNMT3A-215ENST00000496570 PRELID3AQ96N28 172 aa10.42□□□□□ -0.74
DNMT3A-215ENST00000496570 PRSS47A8MTI9 375 aa10.41□□□□□ -0.74
DNMT3A-215ENST00000496570 RPL39P62891 51 aaKnown RBP10.41□□□□□ -0.74
DNMT3A-215ENST00000496570 C9orf163Q8N9P6 203 aa10.41□□□□□ -0.74
DNMT3A-215ENST00000496570 CTDSP1Q9GZU7 261 aa10.41□□□□□ -0.74
DNMT3A-215ENST00000496570 TCAPO15273 167 aa10.4□□□□□ -0.74
DNMT3A-215ENST00000496570 CNBPP62633 177 aaKnown RBP10.4□□□□□ -0.74
DNMT3A-215ENST00000496570 Q5VSD8 79 aa10.4□□□□□ -0.74
DNMT3A-215ENST00000496570 TIMM21Q9BVV7 248 aa10.4□□□□□ -0.74
DNMT3A-215ENST00000496570 CARHSP1Q9Y2V2 147 aaKnown RBP10.4□□□□□ -0.74
DNMT3A-215ENST00000496570 SRRM2Q9UQ35 2752 aaKnown RBP10.4□□□□□ -0.74
DNMT3A-215ENST00000496570 hDV102S1A0JD36 115 aa10.39□□□□□ -0.75
DNMT3A-215ENST00000496570 EPM2AB3EWF7 344 aa10.39□□□□□ -0.75
DNMT3A-215ENST00000496570 CCL25O15444 150 aa10.39□□□□□ -0.75
DNMT3A-215ENST00000496570 RNASE13Q5GAN3 156 aaKnown RBP10.39□□□□□ -0.75
DNMT3A-215ENST00000496570 Q6ZUT4 128 aa10.39□□□□□ -0.75
DNMT3A-215ENST00000496570 SCXQ7RTU7 201 aa10.39□□□□□ -0.75
DNMT3A-215ENST00000496570 XCL1P47992 114 aa10.38□□□□□ -0.75
DNMT3A-215ENST00000496570 LAMTOR2Q9Y2Q5 125 aa10.38□□□□□ -0.75
DNMT3A-215ENST00000496570 SDIM1Q6ZPB5 146 aa10.37□□□□□ -0.75
DNMT3A-215ENST00000496570 CHAC1Q9BUX1 264 aa10.37□□□□□ -0.75
DNMT3A-215ENST00000496570 TRAV9-1A0A075B6T8 112 aa10.36□□□□□ -0.75
DNMT3A-215ENST00000496570 GVQW2A0A096LPI5 108 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-215ENST00000496570 PANO1I0J062 215 aa10.36□□□□□ -0.75
DNMT3A-215ENST00000496570 CIRBP-AS1Q8TBR5 109 aa10.36□□□□□ -0.75
DNMT3A-215ENST00000496570 OPRPNQ99935 248 aaPredicted RBP10.36□□□□□ -0.75
DNMT3A-215ENST00000496570 SS18Q15532 418 aa10.35□□□□□ -0.75
DNMT3A-215ENST00000496570 HIGD2BQ4VC39 106 aa10.35□□□□□ -0.75
DNMT3A-215ENST00000496570 CD164L2Q6UWJ8 174 aa10.35□□□□□ -0.75
DNMT3A-215ENST00000496570 TMEM18Q96B42 140 aa10.35□□□□□ -0.75
DNMT3A-215ENST00000496570 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.35□□□□□ -0.75
DNMT3A-215ENST00000496570 LOC389332A0A1B0GUA5 103 aa10.34□□□□□ -0.75
DNMT3A-215ENST00000496570 SMAGPQ0VAQ4 97 aa10.34□□□□□ -0.75
DNMT3A-215ENST00000496570 CFAP161Q6P656 301 aa10.34□□□□□ -0.75
DNMT3A-215ENST00000496570 Q8N8P6 123 aa10.34□□□□□ -0.75
DNMT3A-215ENST00000496570 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
DNMT3A-215ENST00000496570 MRPS36P82909 103 aaKnown RBP10.33□□□□□ -0.76
DNMT3A-215ENST00000496570 MAP1LC3AQ9H492 121 aa10.33□□□□□ -0.76
DNMT3A-215ENST00000496570 SPANXA1Q9NS26 97 aa10.33□□□□□ -0.76
DNMT3A-215ENST00000496570 TRAV13-1A0A0B4J241 112 aa10.32□□□□□ -0.76
DNMT3A-215ENST00000496570 RAB5AP20339 215 aa10.32□□□□□ -0.76
DNMT3A-215ENST00000496570 CIRBPQ14011 172 aaKnown RBP10.32□□□□□ -0.76
DNMT3A-215ENST00000496570 RHEBQ15382 184 aa10.32□□□□□ -0.76
DNMT3A-215ENST00000496570 KIAA1644Q3SXP7 199 aa10.32□□□□□ -0.76
DNMT3A-215ENST00000496570 AP5S1Q9NUS5 200 aa10.32□□□□□ -0.76
DNMT3A-215ENST00000496570 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
DNMT3A-215ENST00000496570 LINC00526Q96FQ7 95 aa10.31□□□□□ -0.76
DNMT3A-215ENST00000496570 GNB1LQ9BYB4 327 aa10.31□□□□□ -0.76
DNMT3A-215ENST00000496570 RPS10P5Q9NQ39 176 aa10.31□□□□□ -0.76
DNMT3A-215ENST00000496570 PYGO1Q9Y3Y4 419 aa10.31□□□□□ -0.76
DNMT3A-215ENST00000496570 IGHV1-58A0A0C4DH39 117 aa10.3□□□□□ -0.76
DNMT3A-215ENST00000496570 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
DNMT3A-215ENST00000496570 S100PP25815 95 aa10.3□□□□□ -0.76
DNMT3A-215ENST00000496570 KRTAP10-4P60372 401 aaPredicted RBP10.3□□□□□ -0.76
DNMT3A-215ENST00000496570 MYCBP2O75592 4640 aa10.3□□□□□ -0.76
DNMT3A-215ENST00000496570 IGLV4-3A0A075B6K6 122 aa10.29□□□□□ -0.76
DNMT3A-215ENST00000496570 IGHV3-64A0A075B6Q5 118 aa10.29□□□□□ -0.76
DNMT3A-215ENST00000496570 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.29□□□□□ -0.76
DNMT3A-215ENST00000496570 IFI27P40305 119 aaPredicted RBP10.29□□□□□ -0.76
DNMT3A-215ENST00000496570 CHTF8P0CG12 524 aa10.28□□□□□ -0.76
DNMT3A-215ENST00000496570 IGHV3OR16-9A0A0B4J2B5 98 aa10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 COX7A2LO14548 114 aa10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 INAFM2P0DMQ5 153 aa10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 C2orf66Q6UXQ4 117 aa10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 C5orf38Q86SI9 138 aa10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 PRSS3P2Q8NHM4 247 aa10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 ALKBH7Q9BT30 221 aaPredicted RBP10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 NXT2Q9NPJ8 142 aaKnown RBP10.27□□□□□ -0.77
DNMT3A-215ENST00000496570 K7EMI3 77 aa10.26□□□□□ -0.77
DNMT3A-215ENST00000496570 APOC3P02656 99 aa10.26□□□□□ -0.77
DNMT3A-215ENST00000496570 ORMDL2Q53FV1 153 aa10.26□□□□□ -0.77
DNMT3A-215ENST00000496570 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
DNMT3A-215ENST00000496570 SPACA4Q8TDM5 124 aa10.26□□□□□ -0.77
DNMT3A-215ENST00000496570 TGIF2-C20orf24A0A0A6YYL0 155 aa10.25□□□□□ -0.77
DNMT3A-215ENST00000496570 IGIPA6NJ69 53 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms