RNA–Protein interactions for RNA: ENST00000496542.1

FN1-226, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-226ENST00000496542 TMEM191AQ9H0A3 160 aa8.2□□□□□ -1.1
FN1-226ENST00000496542 PLAC8Q9NZF1 115 aa8.2□□□□□ -1.1
FN1-226ENST00000496542 PLA2G2DQ9UNK4 145 aa8.2□□□□□ -1.1
FN1-226ENST00000496542 PHOX2AO14813 284 aa8.19□□□□□ -1.1
FN1-226ENST00000496542 CCL25O15444 150 aa8.19□□□□□ -1.1
FN1-226ENST00000496542 NDUFS6O75380 124 aaKnown RBP8.19□□□□□ -1.1
FN1-226ENST00000496542 ESDP10768 282 aa8.19□□□□□ -1.1
FN1-226ENST00000496542 C7orf33Q8WU49 177 aa8.19□□□□□ -1.1
FN1-226ENST00000496542 FAM210AQ96ND0 272 aa8.19□□□□□ -1.1
FN1-226ENST00000496542 LINC00959A0A1B0GUT2 108 aa8.18□□□□□ -1.1
FN1-226ENST00000496542 SMKR1H3BMG3 65 aa8.18□□□□□ -1.1
FN1-226ENST00000496542 SRP19P09132 144 aaKnown RBP8.18□□□□□ -1.1
FN1-226ENST00000496542 RAB4AP20338 218 aa8.18□□□□□ -1.1
FN1-226ENST00000496542 Q6ZRU5 148 aa8.18□□□□□ -1.1
FN1-226ENST00000496542 AMN1Q8IY45 258 aa8.18□□□□□ -1.1
FN1-226ENST00000496542 OSTCQ9NRP0 149 aa8.18□□□□□ -1.1
FN1-226ENST00000496542 IGHV1-58A0A0C4DH39 117 aa8.17□□□□□ -1.1
FN1-226ENST00000496542 C7orf77A4D0Y5 90 aa8.17□□□□□ -1.1
FN1-226ENST00000496542 POLR2KP53803 58 aaKnown RBP8.17□□□□□ -1.1
FN1-226ENST00000496542 STPG4Q8N801 248 aa8.17□□□□□ -1.1
FN1-226ENST00000496542 LINC00526Q96FQ7 95 aa8.17□□□□□ -1.1
FN1-226ENST00000496542 A0A096LNI7 61 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 MT1HL1P0DM35 61 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 FCER1GP30273 86 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 RIGQ13278 110 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 SS18Q15532 418 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
FN1-226ENST00000496542 CDC42SE2Q9NRR3 84 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 V9GYV3 84 aa8.16□□□□□ -1.1
FN1-226ENST00000496542 ZNF664Q8N3J9 261 aa8.15□□□□□ -1.1
FN1-226ENST00000496542 NUP35Q8NFH5 326 aa8.15□□□□□ -1.1
FN1-226ENST00000496542 CARD19Q96LW7 228 aa8.15□□□□□ -1.1
FN1-226ENST00000496542 VCYO14598 125 aa8.14□□□□□ -1.11
FN1-226ENST00000496542 CD164L2Q6UWJ8 174 aa8.14□□□□□ -1.11
FN1-226ENST00000496542 ISOC2Q96AB3 205 aa8.14□□□□□ -1.11
FN1-226ENST00000496542 PKIGQ9Y2B9 76 aa8.14□□□□□ -1.11
FN1-226ENST00000496542 UBR4Q5T4S7 5183 aa8.14□□□□□ -1.11
FN1-226ENST00000496542 ZNF561-AS1K7EIQ3 104 aa8.13□□□□□ -1.11
FN1-226ENST00000496542 SUMO2P61956 95 aaKnown RBP8.13□□□□□ -1.11
FN1-226ENST00000496542 PRR3P79522 188 aaKnown RBP8.13□□□□□ -1.11
FN1-226ENST00000496542 ADIRFQ15847 76 aa8.13□□□□□ -1.11
FN1-226ENST00000496542 TMEM241Q24JQ0 296 aa8.13□□□□□ -1.11
FN1-226ENST00000496542 RNASE13Q5GAN3 156 aaKnown RBP8.13□□□□□ -1.11
FN1-226ENST00000496542 NRACQ8N912 160 aa8.13□□□□□ -1.11
FN1-226ENST00000496542 NAT8BQ9UHF3 227 aa8.13□□□□□ -1.11
FN1-226ENST00000496542 PPP1R17O96001 155 aa8.12□□□□□ -1.11
FN1-226ENST00000496542 RPL23P62829 140 aaKnown RBP8.12□□□□□ -1.11
FN1-226ENST00000496542 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
FN1-226ENST00000496542 FAM74A3Q4VXF1 159 aa8.12□□□□□ -1.11
FN1-226ENST00000496542 KIR2DL4Q99706 377 aa8.12□□□□□ -1.11
FN1-226ENST00000496542 LINC00474Q9P2X8 69 aa8.12□□□□□ -1.11
FN1-226ENST00000496542 TNXBP22105 4242 aa8.11□□□□□ -1.11
FN1-226ENST00000496542 MALP21145 153 aa8.11□□□□□ -1.11
FN1-226ENST00000496542 CAMPP49913 170 aa8.11□□□□□ -1.11
FN1-226ENST00000496542 SMAGPQ0VAQ4 97 aa8.11□□□□□ -1.11
FN1-226ENST00000496542 MRPL51Q4U2R6 128 aaKnown RBP8.11□□□□□ -1.11
FN1-226ENST00000496542 TRAV13-1A0A0B4J241 112 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 C1orf196B1AJZ1 125 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 C9JQL5 133 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 COX7A2LO14548 114 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 PPP1R2P9O14990 202 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 FAM104BQ5XKR9 115 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 Q6ZUT4 128 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 NAT8Q9UHE5 227 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 UBE2D4Q9Y2X8 147 aa8.1□□□□□ -1.11
FN1-226ENST00000496542 IGLV4-69A0A075B6H9 119 aa8.09□□□□□ -1.11
FN1-226ENST00000496542 A0A1B0GVG6 124 aa8.09□□□□□ -1.11
FN1-226ENST00000496542 GAGE2BQ13066 116 aa8.09□□□□□ -1.11
FN1-226ENST00000496542 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
FN1-226ENST00000496542 SMIM27A0A1W2PRY6 76 aa8.08□□□□□ -1.12
FN1-226ENST00000496542 CKS2P33552 79 aa8.08□□□□□ -1.12
FN1-226ENST00000496542 PTTG1IPP53801 180 aa8.08□□□□□ -1.12
FN1-226ENST00000496542 C5orf38Q86SI9 138 aa8.08□□□□□ -1.12
FN1-226ENST00000496542 TMEM18Q96B42 140 aa8.08□□□□□ -1.12
FN1-226ENST00000496542 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
FN1-226ENST00000496542 LOC107984640A0A0U1RRK4 108 aa8.07□□□□□ -1.12
FN1-226ENST00000496542 A0A1B0GW15 77 aa8.07□□□□□ -1.12
FN1-226ENST00000496542 SRSF3P84103 164 aaKnown RBP8.07□□□□□ -1.12
FN1-226ENST00000496542 PEA15Q15121 130 aa8.07□□□□□ -1.12
FN1-226ENST00000496542 MRPL54Q6P161 138 aaKnown RBP8.07□□□□□ -1.12
FN1-226ENST00000496542 C20orf78Q9BR46 151 aa8.07□□□□□ -1.12
FN1-226ENST00000496542 TIMM21Q9BVV7 248 aa8.07□□□□□ -1.12
FN1-226ENST00000496542 LINC00862A6NCI5 91 aa8.06□□□□□ -1.12
FN1-226ENST00000496542 RPL39P62891 51 aaKnown RBP8.06□□□□□ -1.12
FN1-226ENST00000496542 TRBV24-1A0A075B6N3 115 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 D6R8Y8 96 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 TNFRSF6BO95407 300 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 APOMO95445 188 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 RPL32P62910 135 aaKnown RBP8.05□□□□□ -1.12
FN1-226ENST00000496542 HBBP68871 147 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 SPAG11BQ08648 103 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 Q6ZRP5 223 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 LINC01600Q96MT4 127 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 SMIM2Q9BVW6 85 aa8.05□□□□□ -1.12
FN1-226ENST00000496542 TCAPO15273 167 aa8.04□□□□□ -1.12
FN1-226ENST00000496542 S100A8P05109 93 aa8.04□□□□□ -1.12
FN1-226ENST00000496542 RPL18AQ02543 176 aaKnown RBP8.04□□□□□ -1.12
FN1-226ENST00000496542 C2orf48Q96LS8 159 aa8.04□□□□□ -1.12
FN1-226ENST00000496542 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms