RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 ISOC2Q96AB3 205 aa9.08□□□□□ -0.96
VTI1A-209ENST00000496445 ST20Q9HBF5 79 aa9.08□□□□□ -0.96
VTI1A-209ENST00000496445 SMKR1H3BMG3 65 aa9.07□□□□□ -0.96
VTI1A-209ENST00000496445 OXTP01178 125 aa9.07□□□□□ -0.96
VTI1A-209ENST00000496445 NUP35Q8NFH5 326 aa9.07□□□□□ -0.96
VTI1A-209ENST00000496445 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
VTI1A-209ENST00000496445 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
VTI1A-209ENST00000496445 TRBV27A0A0K0K1C4 114 aa9.06□□□□□ -0.96
VTI1A-209ENST00000496445 C9JQL5 133 aa9.06□□□□□ -0.96
VTI1A-209ENST00000496445 RPL23P62829 140 aaKnown RBP9.06□□□□□ -0.96
VTI1A-209ENST00000496445 CFAP161Q6P656 301 aa9.06□□□□□ -0.96
VTI1A-209ENST00000496445 MRAP2Q96G30 205 aa9.06□□□□□ -0.96
VTI1A-209ENST00000496445 A0A087WYN8 130 aa9.05□□□□□ -0.96
VTI1A-209ENST00000496445 NRACQ8N912 160 aa9.05□□□□□ -0.96
VTI1A-209ENST00000496445 LINC00959A0A1B0GUT2 108 aa9.04□□□□□ -0.96
VTI1A-209ENST00000496445 XCL1P47992 114 aa9.04□□□□□ -0.96
VTI1A-209ENST00000496445 SRSF3P84103 164 aaKnown RBP9.04□□□□□ -0.96
VTI1A-209ENST00000496445 COX6A2Q02221 97 aa9.04□□□□□ -0.96
VTI1A-209ENST00000496445 MRPL52Q86TS9 123 aaKnown RBP9.04□□□□□ -0.96
VTI1A-209ENST00000496445 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
VTI1A-209ENST00000496445 BTF3L4Q96K17 158 aa9.04□□□□□ -0.96
VTI1A-209ENST00000496445 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 C7orf77A4D0Y5 90 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 CCL25O15444 150 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 RIGQ13278 110 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 ADIRFQ15847 76 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 TMEM241Q24JQ0 296 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 FAM74A3Q4VXF1 159 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 PRSS3P2Q8NHM4 247 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 CDC42SE2Q9NRR3 84 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 PLAC8Q9NZF1 115 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 NAT8BQ9UHF3 227 aa9.03□□□□□ -0.96
VTI1A-209ENST00000496445 NAT8Q9UHE5 227 aa9.02□□□□□ -0.97
VTI1A-209ENST00000496445 SMIM27A0A1W2PRY6 76 aa9.01□□□□□ -0.97
VTI1A-209ENST00000496445 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
VTI1A-209ENST00000496445 MRPL51Q4U2R6 128 aaKnown RBP9.01□□□□□ -0.97
VTI1A-209ENST00000496445 ZNF664Q8N3J9 261 aa9.01□□□□□ -0.97
VTI1A-209ENST00000496445 LINC00526Q96FQ7 95 aa9.01□□□□□ -0.97
VTI1A-209ENST00000496445 A0A096LNI7 61 aa9□□□□□ -0.97
VTI1A-209ENST00000496445 IGHV1-58A0A0C4DH39 117 aa9□□□□□ -0.97
VTI1A-209ENST00000496445 IGKV2-24A0A0C4DH68 120 aa9□□□□□ -0.97
VTI1A-209ENST00000496445 VCYO14598 125 aa9□□□□□ -0.97
VTI1A-209ENST00000496445 FAM104BQ5XKR9 115 aa9□□□□□ -0.97
VTI1A-209ENST00000496445 DPH3Q96FX2 82 aa9□□□□□ -0.97
VTI1A-209ENST00000496445 UBE2D4Q9Y2X8 147 aa9□□□□□ -0.97
VTI1A-209ENST00000496445 PHOX2AO14813 284 aa8.99□□□□□ -0.97
VTI1A-209ENST00000496445 FCER1GP30273 86 aa8.99□□□□□ -0.97
VTI1A-209ENST00000496445 SS18Q15532 418 aa8.99□□□□□ -0.97
VTI1A-209ENST00000496445 MAJINQ3KP22 176 aa8.99□□□□□ -0.97
VTI1A-209ENST00000496445 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
VTI1A-209ENST00000496445 PPP1R17O96001 155 aa8.98□□□□□ -0.97
VTI1A-209ENST00000496445 CAMPP49913 170 aa8.98□□□□□ -0.97
VTI1A-209ENST00000496445 RNASE13Q5GAN3 156 aaKnown RBP8.98□□□□□ -0.97
VTI1A-209ENST00000496445 PPP1R2P9O14990 202 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 MT1HL1P0DM35 61 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 PEA15Q15121 130 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 SERTAD4-AS1Q5TG53 156 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 Q6ZUT4 128 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 STPG4Q8N801 248 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 CARD19Q96LW7 228 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 KIR2DL4Q99706 377 aa8.97□□□□□ -0.97
VTI1A-209ENST00000496445 CSDC2Q9Y534 153 aaKnown RBP8.97□□□□□ -0.97
VTI1A-209ENST00000496445 A0A1B0GW15 77 aa8.96□□□□□ -0.98
VTI1A-209ENST00000496445 A0A1B0GXF2 115 aa8.96□□□□□ -0.98
VTI1A-209ENST00000496445 Q6ZRU5 148 aa8.96□□□□□ -0.98
VTI1A-209ENST00000496445 SMDT1Q9H4I9 107 aa8.96□□□□□ -0.98
VTI1A-209ENST00000496445 TRBV24-1A0A075B6N3 115 aa8.95□□□□□ -0.98
VTI1A-209ENST00000496445 LINC00862A6NCI5 91 aa8.95□□□□□ -0.98
VTI1A-209ENST00000496445 RPL32P62910 135 aaKnown RBP8.95□□□□□ -0.98
VTI1A-209ENST00000496445 MRPL54Q6P161 138 aaKnown RBP8.95□□□□□ -0.98
VTI1A-209ENST00000496445 C7orf33Q8WU49 177 aa8.95□□□□□ -0.98
VTI1A-209ENST00000496445 C20orf78Q9BR46 151 aa8.95□□□□□ -0.98
VTI1A-209ENST00000496445 C1orf196B1AJZ1 125 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 D6R8Y8 96 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 ZNF561-AS1K7EIQ3 104 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 TNFRSF6BO95407 300 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 CKS2P33552 79 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 HBBP68871 147 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 PRR3P79522 188 aaKnown RBP8.94□□□□□ -0.98
VTI1A-209ENST00000496445 FAM104AQ969W3 186 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 SMIM2Q9BVW6 85 aa8.94□□□□□ -0.98
VTI1A-209ENST00000496445 IGLV4-69A0A075B6H9 119 aa8.93□□□□□ -0.98
VTI1A-209ENST00000496445 TRAV13-1A0A0B4J241 112 aa8.93□□□□□ -0.98
VTI1A-209ENST00000496445 COX7A2LO14548 114 aa8.93□□□□□ -0.98
VTI1A-209ENST00000496445 RPL39P62891 51 aaKnown RBP8.93□□□□□ -0.98
VTI1A-209ENST00000496445 SYCNQ0VAF6 134 aa8.93□□□□□ -0.98
VTI1A-209ENST00000496445 TIMM21Q9BVV7 248 aa8.93□□□□□ -0.98
VTI1A-209ENST00000496445 NPYP01303 97 aa8.92□□□□□ -0.98
VTI1A-209ENST00000496445 SMAGPQ0VAQ4 97 aa8.92□□□□□ -0.98
VTI1A-209ENST00000496445 PKIGQ9Y2B9 76 aa8.92□□□□□ -0.98
VTI1A-209ENST00000496445 MALP21145 153 aa8.91□□□□□ -0.98
VTI1A-209ENST00000496445 C5orf38Q86SI9 138 aa8.91□□□□□ -0.98
VTI1A-209ENST00000496445 TMEM18Q96B42 140 aa8.91□□□□□ -0.98
VTI1A-209ENST00000496445 LINC00474Q9P2X8 69 aa8.91□□□□□ -0.98
VTI1A-209ENST00000496445 PTTG1IPP53801 180 aa8.9□□□□□ -0.98
VTI1A-209ENST00000496445 PLA2G2DQ9UNK4 145 aa8.9□□□□□ -0.98
VTI1A-209ENST00000496445 LRP2P98164 4655 aa8.89□□□□□ -0.99
VTI1A-209ENST00000496445 F8W036 122 aa8.89□□□□□ -0.99
VTI1A-209ENST00000496445 TCAPO15273 167 aa8.89□□□□□ -0.99
VTI1A-209ENST00000496445 S100A8P05109 93 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms