RNA–Protein interactions for RNA: ENST00000495636.1

SLC6A1-205, Transcript of solute carrier family 6 member 1, humanhuman

TSL 2

Gene SLC6A1, Length 1,088 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-205ENST00000495636 GAS8-AS1O95177 125 aa10.07□□□□□ -0.8
SLC6A1-205ENST00000495636 PRR3P79522 188 aaKnown RBP10.07□□□□□ -0.8
SLC6A1-205ENST00000495636 TSKUQ8WUA8 353 aa10.07□□□□□ -0.8
SLC6A1-205ENST00000495636 TMEM191AQ9H0A3 160 aa10.07□□□□□ -0.8
SLC6A1-205ENST00000495636 LINC00474Q9P2X8 69 aa10.07□□□□□ -0.8
SLC6A1-205ENST00000495636 HIGD1CA8MV81 97 aa10.06□□□□□ -0.8
SLC6A1-205ENST00000495636 POLR2KP53803 58 aaKnown RBP10.06□□□□□ -0.8
SLC6A1-205ENST00000495636 SS18Q15532 418 aa10.06□□□□□ -0.8
SLC6A1-205ENST00000495636 MRPL52Q86TS9 123 aaKnown RBP10.06□□□□□ -0.8
SLC6A1-205ENST00000495636 LINC01551Q86U37 167 aa10.06□□□□□ -0.8
SLC6A1-205ENST00000495636 AKAP14Q86UN6 197 aa10.06□□□□□ -0.8
SLC6A1-205ENST00000495636 SMIM7Q9BQ49 75 aa10.06□□□□□ -0.8
SLC6A1-205ENST00000495636 TRBV27A0A0K0K1C4 114 aa10.05□□□□□ -0.8
SLC6A1-205ENST00000495636 C7orf77A4D0Y5 90 aa10.05□□□□□ -0.8
SLC6A1-205ENST00000495636 CARD19Q96LW7 228 aa10.05□□□□□ -0.8
SLC6A1-205ENST00000495636 CDC42SE2Q9NRR3 84 aa10.05□□□□□ -0.8
SLC6A1-205ENST00000495636 RAB4AP20338 218 aa10.04□□□□□ -0.8
SLC6A1-205ENST00000495636 CD164L2Q6UWJ8 174 aa10.04□□□□□ -0.8
SLC6A1-205ENST00000495636 EIF5A2Q9GZV4 153 aaKnown RBP10.04□□□□□ -0.8
SLC6A1-205ENST00000495636 OSTCQ9NRP0 149 aa10.04□□□□□ -0.8
SLC6A1-205ENST00000495636 AMN1Q8IY45 258 aa10.03□□□□□ -0.8
SLC6A1-205ENST00000495636 ZNF664Q8N3J9 261 aa10.03□□□□□ -0.8
SLC6A1-205ENST00000495636 LINC00526Q96FQ7 95 aa10.03□□□□□ -0.8
SLC6A1-205ENST00000495636 ZNF727A8MUV8 499 aa10.02□□□□□ -0.81
SLC6A1-205ENST00000495636 ZNF561-AS1K7EIQ3 104 aa10.02□□□□□ -0.81
SLC6A1-205ENST00000495636 PPP1R17O96001 155 aa10.01□□□□□ -0.81
SLC6A1-205ENST00000495636 FCER1GP30273 86 aa10.01□□□□□ -0.81
SLC6A1-205ENST00000495636 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
SLC6A1-205ENST00000495636 RIGQ13278 110 aa10.01□□□□□ -0.81
SLC6A1-205ENST00000495636 LINC01600Q96MT4 127 aa10.01□□□□□ -0.81
SLC6A1-205ENST00000495636 VCYO14598 125 aa10□□□□□ -0.81
SLC6A1-205ENST00000495636 CAMPP49913 170 aa10□□□□□ -0.81
SLC6A1-205ENST00000495636 SMAGPQ0VAQ4 97 aa10□□□□□ -0.81
SLC6A1-205ENST00000495636 ISOC2Q96AB3 205 aa10□□□□□ -0.81
SLC6A1-205ENST00000495636 CSDC2Q9Y534 153 aaKnown RBP10□□□□□ -0.81
SLC6A1-205ENST00000495636 V9GYV3 84 aa10□□□□□ -0.81
SLC6A1-205ENST00000495636 C1orf196B1AJZ1 125 aa9.99□□□□□ -0.81
SLC6A1-205ENST00000495636 SMKR1H3BMG3 65 aa9.99□□□□□ -0.81
SLC6A1-205ENST00000495636 SRP19P09132 144 aaKnown RBP9.99□□□□□ -0.81
SLC6A1-205ENST00000495636 SUMO2P61956 95 aaKnown RBP9.99□□□□□ -0.81
SLC6A1-205ENST00000495636 UBR4Q5T4S7 5183 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 COX7A2LO14548 114 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 MALP21145 153 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 NRACQ8N912 160 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 NUP35Q8NFH5 326 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 KIR2DL4Q99706 377 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 UBE2D4Q9Y2X8 147 aa9.98□□□□□ -0.81
SLC6A1-205ENST00000495636 hCG_2014768A0A024R1R8 64 aa9.97□□□□□ -0.81
SLC6A1-205ENST00000495636 IGLV4-69A0A075B6H9 119 aa9.97□□□□□ -0.81
SLC6A1-205ENST00000495636 PPP1R2P9O14990 202 aa9.97□□□□□ -0.81
SLC6A1-205ENST00000495636 PTTG1IPP53801 180 aa9.97□□□□□ -0.81
SLC6A1-205ENST00000495636 Q6ZRP5 223 aa9.97□□□□□ -0.81
SLC6A1-205ENST00000495636 A0A0J9YXV3 536 aa9.96□□□□□ -0.82
SLC6A1-205ENST00000495636 LOC107984640A0A0U1RRK4 108 aa9.96□□□□□ -0.82
SLC6A1-205ENST00000495636 REG3GQ6UW15 175 aa9.96□□□□□ -0.82
SLC6A1-205ENST00000495636 NAT8BQ9UHF3 227 aa9.96□□□□□ -0.82
SLC6A1-205ENST00000495636 TRAV13-1A0A0B4J241 112 aa9.95□□□□□ -0.82
SLC6A1-205ENST00000495636 GAGE2BQ13066 116 aa9.95□□□□□ -0.82
SLC6A1-205ENST00000495636 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
SLC6A1-205ENST00000495636 TMEM18Q96B42 140 aa9.95□□□□□ -0.82
SLC6A1-205ENST00000495636 CAMK2N2Q96S95 79 aa9.95□□□□□ -0.82
SLC6A1-205ENST00000495636 RPL23P62829 140 aaKnown RBP9.94□□□□□ -0.82
SLC6A1-205ENST00000495636 TMEM241Q24JQ0 296 aa9.94□□□□□ -0.82
SLC6A1-205ENST00000495636 FAM74A3Q4VXF1 159 aa9.94□□□□□ -0.82
SLC6A1-205ENST00000495636 FAM104BQ5XKR9 115 aa9.94□□□□□ -0.82
SLC6A1-205ENST00000495636 Q6ZUT4 128 aa9.94□□□□□ -0.82
SLC6A1-205ENST00000495636 C2orf48Q96LS8 159 aa9.94□□□□□ -0.82
SLC6A1-205ENST00000495636 TIMM21Q9BVV7 248 aa9.94□□□□□ -0.82
SLC6A1-205ENST00000495636 LINC00862A6NCI5 91 aa9.93□□□□□ -0.82
SLC6A1-205ENST00000495636 APOMO95445 188 aa9.93□□□□□ -0.82
SLC6A1-205ENST00000495636 SRSF9Q13242 221 aaKnown RBP eCLIP9.93□□□□□ -0.82
SLC6A1-205ENST00000495636 MRPL51Q4U2R6 128 aaKnown RBP9.93□□□□□ -0.82
SLC6A1-205ENST00000495636 RPL32P62910 135 aaKnown RBP9.92□□□□□ -0.82
SLC6A1-205ENST00000495636 ADIRFQ15847 76 aa9.92□□□□□ -0.82
SLC6A1-205ENST00000495636 C5orf38Q86SI9 138 aa9.92□□□□□ -0.82
SLC6A1-205ENST00000495636 C20orf78Q9BR46 151 aa9.92□□□□□ -0.82
SLC6A1-205ENST00000495636 TNXBP22105 4242 aa9.92□□□□□ -0.82
SLC6A1-205ENST00000495636 TRBV24-1A0A075B6N3 115 aa9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 A0A1B0GW15 77 aa9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 SMIM27A0A1W2PRY6 76 aa9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 TCAPO15273 167 aa9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 KRTAP10-8P60410 259 aa9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 SPAG11BQ08648 103 aa9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 NAT8Q9UHE5 227 aa9.91□□□□□ -0.82
SLC6A1-205ENST00000495636 A0A1W2PNN7 141 aa9.9□□□□□ -0.82
SLC6A1-205ENST00000495636 CKS2P33552 79 aa9.9□□□□□ -0.82
SLC6A1-205ENST00000495636 RPL18AQ02543 176 aaKnown RBP9.89□□□□□ -0.83
SLC6A1-205ENST00000495636 C9orf116Q5BN46 136 aaPredicted RBP9.89□□□□□ -0.83
SLC6A1-205ENST00000495636 OR10D4PQ8NGN7 298 aa9.89□□□□□ -0.83
SLC6A1-205ENST00000495636 TNFRSF6BO95407 300 aa9.88□□□□□ -0.83
SLC6A1-205ENST00000495636 ODF1Q14990 250 aa9.88□□□□□ -0.83
SLC6A1-205ENST00000495636 RNF151Q2KHN1 245 aa9.88□□□□□ -0.83
SLC6A1-205ENST00000495636 SMIM2Q9BVW6 85 aa9.88□□□□□ -0.83
SLC6A1-205ENST00000495636 SPANXA1Q9NS26 97 aa9.88□□□□□ -0.83
SLC6A1-205ENST00000495636 C9JQL5 133 aa9.87□□□□□ -0.83
SLC6A1-205ENST00000495636 S100A8P05109 93 aa9.87□□□□□ -0.83
SLC6A1-205ENST00000495636 RPL39P62891 51 aaKnown RBP9.87□□□□□ -0.83
SLC6A1-205ENST00000495636 LRP2P98164 4655 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms