RNA–Protein interactions for RNA: ENST00000495341.5

LMNA-215, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 394 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-215	ENST00000495341	LINC00959	A0A1B0GUT2	108 aa		10.49	□□□□□ -0.73
LMNA-215	ENST00000495341	C7orf77	A4D0Y5	90 aa		10.49	□□□□□ -0.73
LMNA-215	ENST00000495341	RIG	Q13278	110 aa		10.49	□□□□□ -0.73
LMNA-215	ENST00000495341	MAJIN	Q3KP22	176 aa		10.49	□□□□□ -0.73
LMNA-215	ENST00000495341	PRSS3P2	Q8NHM4	247 aa		10.49	□□□□□ -0.73
LMNA-215	ENST00000495341	C7orf33	Q8WU49	177 aa		10.49	□□□□□ -0.73
LMNA-215	ENST00000495341		V9GYV3	84 aa		10.49	□□□□□ -0.73
LMNA-215	ENST00000495341	SMKR1	H3BMG3	65 aa		10.48	□□□□□ -0.73
LMNA-215	ENST00000495341	FCER1G	P30273	86 aa		10.48	□□□□□ -0.73
LMNA-215	ENST00000495341	POLR2K	P53803	58 aa	Known RBP	10.48	□□□□□ -0.73
LMNA-215	ENST00000495341	SS18	Q15532	418 aa		10.48	□□□□□ -0.73
LMNA-215	ENST00000495341	PLAC8	Q9NZF1	115 aa		10.48	□□□□□ -0.73
LMNA-215	ENST00000495341	TRBV27	A0A0K0K1C4	114 aa		10.47	□□□□□ -0.73
LMNA-215	ENST00000495341	PHOX2A	O14813	284 aa		10.47	□□□□□ -0.73
LMNA-215	ENST00000495341	TMEM241	Q24JQ0	296 aa		10.47	□□□□□ -0.73
LMNA-215	ENST00000495341	MRPL52	Q86TS9	123 aa	Known RBP	10.47	□□□□□ -0.73
LMNA-215	ENST00000495341	NUP35	Q8NFH5	326 aa		10.47	□□□□□ -0.73
LMNA-215	ENST00000495341	ISOC2	Q96AB3	205 aa		10.47	□□□□□ -0.73
LMNA-215	ENST00000495341	HMCN2	Q8NDA2	5059 aa		10.47	□□□□□ -0.73
LMNA-215	ENST00000495341	IGHV1-58	A0A0C4DH39	117 aa		10.46	□□□□□ -0.73
LMNA-215	ENST00000495341	ADIRF	Q15847	76 aa		10.46	□□□□□ -0.73
LMNA-215	ENST00000495341		Q6ZRU5	148 aa		10.46	□□□□□ -0.73
LMNA-215	ENST00000495341	CDC42SE2	Q9NRR3	84 aa		10.46	□□□□□ -0.73
LMNA-215	ENST00000495341	NAT8B	Q9UHF3	227 aa		10.46	□□□□□ -0.73
LMNA-215	ENST00000495341	VCY	O14598	125 aa		10.45	□□□□□ -0.74
LMNA-215	ENST00000495341	RPL23	P62829	140 aa	Known RBP	10.45	□□□□□ -0.74
LMNA-215	ENST00000495341	FAM74A3	Q4VXF1	159 aa		10.45	□□□□□ -0.74
LMNA-215	ENST00000495341	ZNF664	Q8N3J9	261 aa		10.45	□□□□□ -0.74
LMNA-215	ENST00000495341	STPG4	Q8N801	248 aa		10.45	□□□□□ -0.74
LMNA-215	ENST00000495341	LINC00526	Q96FQ7	95 aa		10.45	□□□□□ -0.74
LMNA-215	ENST00000495341		A0A096LNI7	61 aa		10.44	□□□□□ -0.74
LMNA-215	ENST00000495341	PPP1R17	O96001	155 aa		10.44	□□□□□ -0.74
LMNA-215	ENST00000495341	CARD19	Q96LW7	228 aa		10.44	□□□□□ -0.74
LMNA-215	ENST00000495341	KIR2DL4	Q99706	377 aa		10.44	□□□□□ -0.74
LMNA-215	ENST00000495341	PLA2G2D	Q9UNK4	145 aa		10.44	□□□□□ -0.74
LMNA-215	ENST00000495341	PKIG	Q9Y2B9	76 aa		10.44	□□□□□ -0.74
LMNA-215	ENST00000495341	ZNF561-AS1	K7EIQ3	104 aa		10.43	□□□□□ -0.74
LMNA-215	ENST00000495341	SUMO2	P61956	95 aa	Known RBP	10.43	□□□□□ -0.74
LMNA-215	ENST00000495341	SMAGP	Q0VAQ4	97 aa		10.43	□□□□□ -0.74
LMNA-215	ENST00000495341	CD164L2	Q6UWJ8	174 aa		10.43	□□□□□ -0.74
LMNA-215	ENST00000495341		A0A1B0GVG6	124 aa		10.42	□□□□□ -0.74
LMNA-215	ENST00000495341	PPP1R2P9	O14990	202 aa		10.42	□□□□□ -0.74
LMNA-215	ENST00000495341	RNASE13	Q5GAN3	156 aa	Known RBP	10.42	□□□□□ -0.74
LMNA-215	ENST00000495341	NRAC	Q8N912	160 aa		10.42	□□□□□ -0.74
LMNA-215	ENST00000495341	LINC00474	Q9P2X8	69 aa		10.42	□□□□□ -0.74
LMNA-215	ENST00000495341	NAT8	Q9UHE5	227 aa		10.42	□□□□□ -0.74
LMNA-215	ENST00000495341	MAL	P21145	153 aa		10.41	□□□□□ -0.74
LMNA-215	ENST00000495341	CAMP	P49913	170 aa		10.41	□□□□□ -0.74
LMNA-215	ENST00000495341	MRPL51	Q4U2R6	128 aa	Known RBP	10.41	□□□□□ -0.74
LMNA-215	ENST00000495341	FAM104B	Q5XKR9	115 aa		10.41	□□□□□ -0.74
LMNA-215	ENST00000495341	C1orf196	B1AJZ1	125 aa		10.4	□□□□□ -0.74
LMNA-215	ENST00000495341		C9JQL5	133 aa		10.4	□□□□□ -0.74
LMNA-215	ENST00000495341	SYCN	Q0VAF6	134 aa		10.4	□□□□□ -0.74
LMNA-215	ENST00000495341	PEA15	Q15121	130 aa		10.4	□□□□□ -0.74
LMNA-215	ENST00000495341	TMEM18	Q96B42	140 aa		10.4	□□□□□ -0.74
LMNA-215	ENST00000495341	UBE2D4	Q9Y2X8	147 aa		10.4	□□□□□ -0.74
LMNA-215	ENST00000495341	TRAV13-1	A0A0B4J241	112 aa		10.39	□□□□□ -0.75
LMNA-215	ENST00000495341	SMIM27	A0A1W2PRY6	76 aa		10.39	□□□□□ -0.75
LMNA-215	ENST00000495341	COX7A2L	O14548	114 aa		10.39	□□□□□ -0.75
LMNA-215	ENST00000495341	MT1HL1	P0DM35	61 aa		10.39	□□□□□ -0.75
LMNA-215	ENST00000495341	PRR3	P79522	188 aa	Known RBP	10.39	□□□□□ -0.75
LMNA-215	ENST00000495341	SRSF3	P84103	164 aa	Known RBP	10.39	□□□□□ -0.75
LMNA-215	ENST00000495341		Q6ZUT4	128 aa		10.39	□□□□□ -0.75
LMNA-215	ENST00000495341	CSDC2	Q9Y534	153 aa	Known RBP	10.39	□□□□□ -0.75
LMNA-215	ENST00000495341	CKS2	P33552	79 aa		10.38	□□□□□ -0.75
LMNA-215	ENST00000495341	IGLV4-69	A0A075B6H9	119 aa		10.37	□□□□□ -0.75
LMNA-215	ENST00000495341		A0A1B0GW15	77 aa		10.37	□□□□□ -0.75
LMNA-215	ENST00000495341	LINC00862	A6NCI5	91 aa		10.37	□□□□□ -0.75
LMNA-215	ENST00000495341	MRPL54	Q6P161	138 aa	Known RBP	10.37	□□□□□ -0.75
LMNA-215	ENST00000495341	CAMK2N2	Q96S95	79 aa		10.36	□□□□□ -0.75
LMNA-215	ENST00000495341	C20orf78	Q9BR46	151 aa		10.36	□□□□□ -0.75
LMNA-215	ENST00000495341	TCAP	O15273	167 aa		10.35	□□□□□ -0.75
LMNA-215	ENST00000495341	S100A8	P05109	93 aa		10.35	□□□□□ -0.75
LMNA-215	ENST00000495341	HBB	P68871	147 aa		10.35	□□□□□ -0.75
LMNA-215	ENST00000495341	GAGE2B	Q13066	116 aa		10.35	□□□□□ -0.75
LMNA-215	ENST00000495341	C5orf38	Q86SI9	138 aa		10.35	□□□□□ -0.75
LMNA-215	ENST00000495341	TIMM21	Q9BVV7	248 aa		10.35	□□□□□ -0.75
LMNA-215	ENST00000495341	TRBV24-1	A0A075B6N3	115 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	LOC107984640	A0A0U1RRK4	108 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341		D6R8Y8	96 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341		F8W036	122 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	TNFRSF6B	O95407	300 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	APOM	O95445	188 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	PTTG1IP	P53801	180 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	RPL39	P62891	51 aa	Known RBP	10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	SMIM2	Q9BVW6	85 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	SMDT1	Q9H4I9	107 aa		10.34	□□□□□ -0.75
LMNA-215	ENST00000495341	RPL32	P62910	135 aa	Known RBP	10.33	□□□□□ -0.76
LMNA-215	ENST00000495341	SPAG11B	Q08648	103 aa		10.32	□□□□□ -0.76
LMNA-215	ENST00000495341		A0A1B0GXF2	115 aa		10.31	□□□□□ -0.76
LMNA-215	ENST00000495341	NPY	P01303	97 aa		10.31	□□□□□ -0.76
LMNA-215	ENST00000495341	RPL18A	Q02543	176 aa	Known RBP	10.31	□□□□□ -0.76
LMNA-215	ENST00000495341	C2orf48	Q96LS8	159 aa		10.31	□□□□□ -0.76
LMNA-215	ENST00000495341	SPANXA1	Q9NS26	97 aa		10.31	□□□□□ -0.76
LMNA-215	ENST00000495341		Q6ZRP5	223 aa		10.3	□□□□□ -0.76
LMNA-215	ENST00000495341	UBR4	Q5T4S7	5183 aa		10.29	□□□□□ -0.76
LMNA-215	ENST00000495341	IFITM10	A6NMD0	228 aa		10.29	□□□□□ -0.76
LMNA-215	ENST00000495341	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	10.29	□□□□□ -0.76
LMNA-215	ENST00000495341	PPBP	P02775	128 aa		10.29	□□□□□ -0.76
LMNA-215	ENST00000495341	OPRPN	Q99935	248 aa	Predicted RBP	10.29	□□□□□ -0.76

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms