RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 CDC42SE2Q9NRR3 84 aa9.99□□□□□ -0.81
LIMS2-216ENST00000494613 IGHV3-64A0A075B6Q5 118 aa9.98□□□□□ -0.81
LIMS2-216ENST00000494613 LINC00959A0A1B0GUT2 108 aa9.98□□□□□ -0.81
LIMS2-216ENST00000494613 CAMPP49913 170 aa9.98□□□□□ -0.81
LIMS2-216ENST00000494613 FOXI1Q12951 378 aa9.98□□□□□ -0.81
LIMS2-216ENST00000494613 MRPL52Q86TS9 123 aaKnown RBP9.98□□□□□ -0.81
LIMS2-216ENST00000494613 SUMO2P61956 95 aaKnown RBP9.97□□□□□ -0.81
LIMS2-216ENST00000494613 HIGD2BQ4VC39 106 aa9.97□□□□□ -0.81
LIMS2-216ENST00000494613 ZNF664Q8N3J9 261 aa9.97□□□□□ -0.81
LIMS2-216ENST00000494613 A0A1B0GW15 77 aa9.96□□□□□ -0.82
LIMS2-216ENST00000494613 C7orf77A4D0Y5 90 aa9.96□□□□□ -0.82
LIMS2-216ENST00000494613 LINC00862A6NCI5 91 aa9.96□□□□□ -0.82
LIMS2-216ENST00000494613 CCL25O15444 150 aa9.96□□□□□ -0.82
LIMS2-216ENST00000494613 FCER1GP30273 86 aa9.96□□□□□ -0.82
LIMS2-216ENST00000494613 XCL1P47992 114 aa9.96□□□□□ -0.82
LIMS2-216ENST00000494613 MYCBP2O75592 4640 aa9.96□□□□□ -0.82
LIMS2-216ENST00000494613 DMBT1Q9UGM3 2413 aaPredicted RBP9.95□□□□□ -0.82
LIMS2-216ENST00000494613 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
LIMS2-216ENST00000494613 J3QL48 77 aa9.95□□□□□ -0.82
LIMS2-216ENST00000494613 CIRBPQ14011 172 aaKnown RBP9.95□□□□□ -0.82
LIMS2-216ENST00000494613 SS18Q15532 418 aa9.95□□□□□ -0.82
LIMS2-216ENST00000494613 KIR2DL4Q99706 377 aa9.95□□□□□ -0.82
LIMS2-216ENST00000494613 TRBV24-1A0A075B6N3 115 aa9.94□□□□□ -0.82
LIMS2-216ENST00000494613 PPP1R2P9O14990 202 aa9.94□□□□□ -0.82
LIMS2-216ENST00000494613 CKS2P33552 79 aa9.94□□□□□ -0.82
LIMS2-216ENST00000494613 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
LIMS2-216ENST00000494613 HERC1Q15751 4861 aa9.94□□□□□ -0.82
LIMS2-216ENST00000494613 CHTF8P0CG12 524 aa9.93□□□□□ -0.82
LIMS2-216ENST00000494613 COX6A2Q02221 97 aa9.93□□□□□ -0.82
LIMS2-216ENST00000494613 MRPL54Q6P161 138 aaKnown RBP9.93□□□□□ -0.82
LIMS2-216ENST00000494613 C20orf78Q9BR46 151 aa9.93□□□□□ -0.82
LIMS2-216ENST00000494613 CSDC2Q9Y534 153 aaKnown RBP9.93□□□□□ -0.82
LIMS2-216ENST00000494613 A0A087WYN8 130 aa9.92□□□□□ -0.82
LIMS2-216ENST00000494613 GVQW2A0A096LPI5 108 aaPredicted RBP9.92□□□□□ -0.82
LIMS2-216ENST00000494613 TNFRSF6BO95407 300 aa9.92□□□□□ -0.82
LIMS2-216ENST00000494613 CD164L2Q6UWJ8 174 aa9.92□□□□□ -0.82
LIMS2-216ENST00000494613 PRSS3P2Q8NHM4 247 aa9.92□□□□□ -0.82
LIMS2-216ENST00000494613 UBE2D4Q9Y2X8 147 aa9.92□□□□□ -0.82
LIMS2-216ENST00000494613 IGHV1-58A0A0C4DH39 117 aa9.91□□□□□ -0.82
LIMS2-216ENST00000494613 A0A1B0GXF2 115 aa9.91□□□□□ -0.82
LIMS2-216ENST00000494613 F8W036 122 aa9.91□□□□□ -0.82
LIMS2-216ENST00000494613 S100A8P05109 93 aa9.91□□□□□ -0.82
LIMS2-216ENST00000494613 RPL32P62910 135 aaKnown RBP9.91□□□□□ -0.82
LIMS2-216ENST00000494613 HBBP68871 147 aa9.91□□□□□ -0.82
LIMS2-216ENST00000494613 SMAGPQ0VAQ4 97 aa9.91□□□□□ -0.82
LIMS2-216ENST00000494613 LINC00526Q96FQ7 95 aa9.91□□□□□ -0.82
LIMS2-216ENST00000494613 C1orf196B1AJZ1 125 aa9.9□□□□□ -0.82
LIMS2-216ENST00000494613 SPACA4Q8TDM5 124 aa9.9□□□□□ -0.82
LIMS2-216ENST00000494613 D6R8Y8 96 aa9.89□□□□□ -0.83
LIMS2-216ENST00000494613 RAB14P61106 215 aa9.89□□□□□ -0.83
LIMS2-216ENST00000494613 RNASE13Q5GAN3 156 aaKnown RBP9.89□□□□□ -0.83
LIMS2-216ENST00000494613 TMEM18Q96B42 140 aa9.89□□□□□ -0.83
LIMS2-216ENST00000494613 TIMM21Q9BVV7 248 aa9.89□□□□□ -0.83
LIMS2-216ENST00000494613 PPBPP02775 128 aa9.88□□□□□ -0.83
LIMS2-216ENST00000494613 HNRNPA3P51991 378 aaKnown RBP9.88□□□□□ -0.83
LIMS2-216ENST00000494613 PLAC8Q9NZF1 115 aa9.88□□□□□ -0.83
LIMS2-216ENST00000494613 TRAV13-1A0A0B4J241 112 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 ZNF561-AS1K7EIQ3 104 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 TCAPO15273 167 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 OXTP01178 125 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 NPYP01303 97 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 RPL39P62891 51 aaKnown RBP9.87□□□□□ -0.83
LIMS2-216ENST00000494613 MAJINQ3KP22 176 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 TMEM136Q6ZRR5 245 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 SMIM2Q9BVW6 85 aa9.87□□□□□ -0.83
LIMS2-216ENST00000494613 IGKV2-24A0A0C4DH68 120 aa9.86□□□□□ -0.83
LIMS2-216ENST00000494613 PHOX2AO14813 284 aa9.86□□□□□ -0.83
LIMS2-216ENST00000494613 ATP5L2Q7Z4Y8 100 aa9.86□□□□□ -0.83
LIMS2-216ENST00000494613 FAM104AQ969W3 186 aa9.86□□□□□ -0.83
LIMS2-216ENST00000494613 COX7A2LO14548 114 aa9.85□□□□□ -0.83
LIMS2-216ENST00000494613 MT-ND4LP03901 98 aa9.85□□□□□ -0.83
LIMS2-216ENST00000494613 MALP21145 153 aa9.85□□□□□ -0.83
LIMS2-216ENST00000494613 PNRC1Q12796 327 aaPredicted RBP9.85□□□□□ -0.83
LIMS2-216ENST00000494613 Q6ZUT4 128 aa9.85□□□□□ -0.83
LIMS2-216ENST00000494613 ANAPC16Q96DE5 110 aa9.85□□□□□ -0.83
LIMS2-216ENST00000494613 OPRPNQ99935 248 aaPredicted RBP9.85□□□□□ -0.83
LIMS2-216ENST00000494613 A0A096LNI7 61 aa9.84□□□□□ -0.83
LIMS2-216ENST00000494613 SYCNQ0VAF6 134 aa9.84□□□□□ -0.83
LIMS2-216ENST00000494613 C5orf38Q86SI9 138 aa9.84□□□□□ -0.83
LIMS2-216ENST00000494613 ORMDL3Q8N138 153 aa9.84□□□□□ -0.83
LIMS2-216ENST00000494613 STPG4Q8N801 248 aa9.84□□□□□ -0.83
LIMS2-216ENST00000494613 PRELID3AQ96N28 172 aa9.84□□□□□ -0.83
LIMS2-216ENST00000494613 IGLV4-69A0A075B6H9 119 aa9.83□□□□□ -0.84
LIMS2-216ENST00000494613 CARD19Q96LW7 228 aa9.83□□□□□ -0.84
LIMS2-216ENST00000494613 PRSS47A8MTI9 375 aa9.82□□□□□ -0.84
LIMS2-216ENST00000494613 RAB5AP20339 215 aa9.82□□□□□ -0.84
LIMS2-216ENST00000494613 CLLU1Q5K131 121 aa9.82□□□□□ -0.84
LIMS2-216ENST00000494613 MRPS36P82909 103 aaKnown RBP9.81□□□□□ -0.84
LIMS2-216ENST00000494613 C7orf33Q8WU49 177 aa9.81□□□□□ -0.84
LIMS2-216ENST00000494613 SPANXA1Q9NS26 97 aa9.81□□□□□ -0.84
LIMS2-216ENST00000494613 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
LIMS2-216ENST00000494613 LRP1Q07954 4544 aaKnown RBP9.8□□□□□ -0.84
LIMS2-216ENST00000494613 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
LIMS2-216ENST00000494613 Q6ZRU5 148 aa9.8□□□□□ -0.84
LIMS2-216ENST00000494613 APOMO95445 188 aa9.79□□□□□ -0.84
LIMS2-216ENST00000494613 PKIGQ9Y2B9 76 aa9.79□□□□□ -0.84
LIMS2-216ENST00000494613 IGHV3OR16-9A0A0B4J2B5 98 aa9.78□□□□□ -0.84
LIMS2-216ENST00000494613 IFITM2Q01629 132 aa9.78□□□□□ -0.84
LIMS2-216ENST00000494613 C2orf48Q96LS8 159 aa9.78□□□□□ -0.84
LIMS2-216ENST00000494613 CAMK2N2Q96S95 79 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms