RNA–Protein interactions for RNA: ENST00000492991.5

C9orf78-206, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-206ENST00000492991 LINC00474Q9P2X8 69 aa10.29□□□□□ -0.76
C9orf78-206ENST00000492991 IGHV1-58A0A0C4DH39 117 aa10.28□□□□□ -0.76
C9orf78-206ENST00000492991 RAB4AP20338 218 aa10.28□□□□□ -0.76
C9orf78-206ENST00000492991 EIF5A2Q9GZV4 153 aaKnown RBP10.28□□□□□ -0.76
C9orf78-206ENST00000492991 CDC42SE2Q9NRR3 84 aa10.28□□□□□ -0.76
C9orf78-206ENST00000492991 CCL25O15444 150 aa10.27□□□□□ -0.77
C9orf78-206ENST00000492991 GAS8-AS1O95177 125 aa10.27□□□□□ -0.77
C9orf78-206ENST00000492991 PPP1R17O96001 155 aa10.27□□□□□ -0.77
C9orf78-206ENST00000492991 SS18Q15532 418 aa10.27□□□□□ -0.77
C9orf78-206ENST00000492991 ZNF727A8MUV8 499 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 PHOX2AO14813 284 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 XCL1P47992 114 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 CEBPGP53567 150 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 MAJINQ3KP22 176 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 CD164L2Q6UWJ8 174 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 ZNF664Q8N3J9 261 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 TMEM242Q9NWH2 141 aa10.26□□□□□ -0.77
C9orf78-206ENST00000492991 CSDC2Q9Y534 153 aaKnown RBP10.26□□□□□ -0.77
C9orf78-206ENST00000492991 C7orf77A4D0Y5 90 aa10.25□□□□□ -0.77
C9orf78-206ENST00000492991 VCYO14598 125 aa10.25□□□□□ -0.77
C9orf78-206ENST00000492991 SRP19P09132 144 aaKnown RBP10.25□□□□□ -0.77
C9orf78-206ENST00000492991 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
C9orf78-206ENST00000492991 RIGQ13278 110 aa10.25□□□□□ -0.77
C9orf78-206ENST00000492991 STPG4Q8N801 248 aa10.25□□□□□ -0.77
C9orf78-206ENST00000492991 AMN1Q8IY45 258 aa10.24□□□□□ -0.77
C9orf78-206ENST00000492991 V9GYV3 84 aa10.24□□□□□ -0.77
C9orf78-206ENST00000492991 A0A096LNI7 61 aa10.23□□□□□ -0.77
C9orf78-206ENST00000492991 IGKV2-24A0A0C4DH68 120 aa10.23□□□□□ -0.77
C9orf78-206ENST00000492991 FAM74A3Q4VXF1 159 aa10.23□□□□□ -0.77
C9orf78-206ENST00000492991 C1orf196B1AJZ1 125 aa10.22□□□□□ -0.77
C9orf78-206ENST00000492991 ZNF561-AS1K7EIQ3 104 aa10.22□□□□□ -0.77
C9orf78-206ENST00000492991 NUP35Q8NFH5 326 aa10.22□□□□□ -0.77
C9orf78-206ENST00000492991 CARD19Q96LW7 228 aa10.22□□□□□ -0.77
C9orf78-206ENST00000492991 PPP1R2P9O14990 202 aa10.21□□□□□ -0.77
C9orf78-206ENST00000492991 FCER1GP30273 86 aa10.21□□□□□ -0.77
C9orf78-206ENST00000492991 SUMO2P61956 95 aaKnown RBP10.21□□□□□ -0.77
C9orf78-206ENST00000492991 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.77
C9orf78-206ENST00000492991 SYCNQ0VAF6 134 aa10.21□□□□□ -0.77
C9orf78-206ENST00000492991 TMEM241Q24JQ0 296 aa10.21□□□□□ -0.77
C9orf78-206ENST00000492991 NRACQ8N912 160 aa10.21□□□□□ -0.77
C9orf78-206ENST00000492991 ISOC2Q96AB3 205 aa10.21□□□□□ -0.77
C9orf78-206ENST00000492991 NAT8BQ9UHF3 227 aa10.21□□□□□ -0.77
C9orf78-206ENST00000492991 LINC00862A6NCI5 91 aa10.2□□□□□ -0.78
C9orf78-206ENST00000492991 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
C9orf78-206ENST00000492991 KIR2DL4Q99706 377 aa10.2□□□□□ -0.78
C9orf78-206ENST00000492991 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
C9orf78-206ENST00000492991 RPL32P62910 135 aaKnown RBP10.19□□□□□ -0.78
C9orf78-206ENST00000492991 FAM104BQ5XKR9 115 aa10.19□□□□□ -0.78
C9orf78-206ENST00000492991 C20orf78Q9BR46 151 aa10.19□□□□□ -0.78
C9orf78-206ENST00000492991 UBE2D4Q9Y2X8 147 aa10.19□□□□□ -0.78
C9orf78-206ENST00000492991 TRBV24-1A0A075B6N3 115 aa10.18□□□□□ -0.78
C9orf78-206ENST00000492991 A0A1B0GW15 77 aa10.18□□□□□ -0.78
C9orf78-206ENST00000492991 TCAPO15273 167 aa10.18□□□□□ -0.78
C9orf78-206ENST00000492991 CAMPP49913 170 aa10.18□□□□□ -0.78
C9orf78-206ENST00000492991 RPL23P62829 140 aaKnown RBP10.18□□□□□ -0.78
C9orf78-206ENST00000492991 TMEM18Q96B42 140 aa10.18□□□□□ -0.78
C9orf78-206ENST00000492991 LINC00526Q96FQ7 95 aa10.18□□□□□ -0.78
C9orf78-206ENST00000492991 UBR4Q5T4S7 5183 aa10.18□□□□□ -0.78
C9orf78-206ENST00000492991 hCG_2014768A0A024R1R8 64 aa10.17□□□□□ -0.78
C9orf78-206ENST00000492991 SMIM27A0A1W2PRY6 76 aa10.17□□□□□ -0.78
C9orf78-206ENST00000492991 SMKR1H3BMG3 65 aa10.17□□□□□ -0.78
C9orf78-206ENST00000492991 COX7A2LO14548 114 aa10.17□□□□□ -0.78
C9orf78-206ENST00000492991 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
C9orf78-206ENST00000492991 TNXBP22105 4242 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 IGLV4-69A0A075B6H9 119 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 LOC107984640A0A0U1RRK4 108 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 MALP21145 153 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 PTTG1IPP53801 180 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 MRPL51Q4U2R6 128 aaKnown RBP10.16□□□□□ -0.78
C9orf78-206ENST00000492991 C2orf48Q96LS8 159 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 SMDT1Q9H4I9 107 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 NAT8Q9UHE5 227 aa10.16□□□□□ -0.78
C9orf78-206ENST00000492991 SRSF9Q13242 221 aaKnown RBP eCLIP10.15□□□□□ -0.78
C9orf78-206ENST00000492991 Q6ZRP5 223 aa10.15□□□□□ -0.78
C9orf78-206ENST00000492991 APOMO95445 188 aa10.14□□□□□ -0.79
C9orf78-206ENST00000492991 F8WDY8 70 aa10.13□□□□□ -0.79
C9orf78-206ENST00000492991 PEA15Q15121 130 aa10.13□□□□□ -0.79
C9orf78-206ENST00000492991 ADIRFQ15847 76 aa10.13□□□□□ -0.79
C9orf78-206ENST00000492991 RNF151Q2KHN1 245 aa10.13□□□□□ -0.79
C9orf78-206ENST00000492991 REG3GQ6UW15 175 aa10.13□□□□□ -0.79
C9orf78-206ENST00000492991 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
C9orf78-206ENST00000492991 A0A0J9YXV3 536 aa10.12□□□□□ -0.79
C9orf78-206ENST00000492991 C9JQL5 133 aa10.12□□□□□ -0.79
C9orf78-206ENST00000492991 S100A8P05109 93 aa10.12□□□□□ -0.79
C9orf78-206ENST00000492991 CKS2P33552 79 aa10.12□□□□□ -0.79
C9orf78-206ENST00000492991 KRTAP10-8P60410 259 aa10.12□□□□□ -0.79
C9orf78-206ENST00000492991 CAMK2N2Q96S95 79 aa10.12□□□□□ -0.79
C9orf78-206ENST00000492991 F8W036 122 aa10.11□□□□□ -0.79
C9orf78-206ENST00000492991 Q6ZUT4 128 aa10.11□□□□□ -0.79
C9orf78-206ENST00000492991 OR10D4PQ8NGN7 298 aa10.11□□□□□ -0.79
C9orf78-206ENST00000492991 TNFRSF6BO95407 300 aa10.1□□□□□ -0.79
C9orf78-206ENST00000492991 PPBPP02775 128 aa10.1□□□□□ -0.79
C9orf78-206ENST00000492991 MRPS36P82909 103 aaKnown RBP10.1□□□□□ -0.79
C9orf78-206ENST00000492991 GAGE2BQ13066 116 aa10.1□□□□□ -0.79
C9orf78-206ENST00000492991 RNASE13Q5GAN3 156 aaKnown RBP10.1□□□□□ -0.79
C9orf78-206ENST00000492991 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
C9orf78-206ENST00000492991 SPANXA1Q9NS26 97 aa10.1□□□□□ -0.79
C9orf78-206ENST00000492991 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
C9orf78-206ENST00000492991 FAM104AQ969W3 186 aa10.09□□□□□ -0.79
C9orf78-206ENST00000492991 SMIM2Q9BVW6 85 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms