RNA–Protein interactions for RNA: ENST00000492840.1

SND1-216, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 5

Gene SND1, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-216ENST00000492840 C2orf70A6NJV1 201 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 CST7O76096 145 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 IGKV1-17P01599 117 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 CTSDP07339 412 aaPredicted RBP2.63□□□□□ -1.99
SND1-216ENST00000492840 KRTAP10-1P60331 282 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 HAMPP81172 84 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 EIF5AL1Q6IS14 154 aaKnown RBP2.63□□□□□ -1.99
SND1-216ENST00000492840 Q6ZTI0 123 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 PHF5AQ7RTV0 110 aaKnown RBP2.63□□□□□ -1.99
SND1-216ENST00000492840 LINC00471Q8N535 108 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 FAM107BQ9H098 131 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 TMEM138Q9NPI0 162 aa2.63□□□□□ -1.99
SND1-216ENST00000492840 ZNF736B4DX44 427 aaPredicted RBP2.62□□□□□ -1.99
SND1-216ENST00000492840 MIFP14174 115 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 GPX2P18283 190 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 RPS27P42677 84 aaKnown RBP2.62□□□□□ -1.99
SND1-216ENST00000492840 PSG9Q00887 426 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 SLC38A11Q08AI6 406 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 ZNF345Q14585 488 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 LEAP2Q969E1 77 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 NHP2Q9NX24 153 aaKnown RBP2.62□□□□□ -1.99
SND1-216ENST00000492840 PRO0461Q9UI25 63 aa2.62□□□□□ -1.99
SND1-216ENST00000492840 BORCS7-ASMTA0A0B4J1R7 106 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 TRAV5A0A0B4J249 113 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 A0A0G2JQZ4 141 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 ZNF705FA8MVS1 300 aaPredicted RBP2.61□□□□□ -1.99
SND1-216ENST00000492840 IBA57-AS1B1ANH7 110 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 PGLYRP1O75594 196 aaPredicted RBP2.61□□□□□ -1.99
SND1-216ENST00000492840 NDUFA3O95167 84 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 NAPSAO96009 420 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 PMP2P02689 132 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 CBLN1P23435 193 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 CKS1BP61024 79 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 HBBP68871 147 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 Q8IYB0 196 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 LINC00311Q8N616 119 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 USMG5Q96IX5 58 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 FAM103A1Q9BTL3 118 aaKnown RBP2.61□□□□□ -1.99
SND1-216ENST00000492840 IER3IP1Q9Y5U9 82 aa2.61□□□□□ -1.99
SND1-216ENST00000492840 TNXBP22105 4242 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 TMEM189A5PLL7 270 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 J3QQQ9 107 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 K7ERJ3 54 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 SDCBPO00560 298 aaPredicted RBP2.6□□□□□ -1.99
SND1-216ENST00000492840 CDC42EP2O14613 210 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 AKR1C3P42330 323 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 ZNF137PP52743 207 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 DEFA5Q01523 94 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 PLGLAQ15195 96 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 C9orf163Q8N9P6 203 aa2.6□□□□□ -1.99
SND1-216ENST00000492840 IGHV1-58A0A0C4DH39 117 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 A0A1B0GW64 132 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 SDC2P34741 201 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 CDK5R1Q15078 307 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 TPRXLQ17RH7 258 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 PATE2Q6UY27 113 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 TIMM21Q9BVV7 248 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 TAS2R4Q9NYW5 299 aa2.59□□□□□ -1.99
SND1-216ENST00000492840 DNAH8Q96JB1 4490 aa2.59□□□□□ -2
SND1-216ENST00000492840 MEIKINA0A087WXM9 373 aa2.58□□□□□ -2
SND1-216ENST00000492840 TRAV3A0A0B4J244 114 aa2.58□□□□□ -2
SND1-216ENST00000492840 A8MWV9 139 aa2.58□□□□□ -2
SND1-216ENST00000492840 HIST1H2BKO60814 126 aa2.58□□□□□ -2
SND1-216ENST00000492840 TIMM17BO60830 172 aa2.58□□□□□ -2
SND1-216ENST00000492840 OR2H2O95918 312 aa2.58□□□□□ -2
SND1-216ENST00000492840 CYB5AP00167 134 aa2.58□□□□□ -2
SND1-216ENST00000492840 HIST1H2BJP06899 126 aa2.58□□□□□ -2
SND1-216ENST00000492840 MT1HL1P0DM35 61 aa2.58□□□□□ -2
SND1-216ENST00000492840 FABP2P12104 132 aa2.58□□□□□ -2
SND1-216ENST00000492840 POLR2JP52435 117 aaKnown RBP2.58□□□□□ -2
SND1-216ENST00000492840 SLC25A26Q70HW3 274 aa2.58□□□□□ -2
SND1-216ENST00000492840 COA4Q9NYJ1 87 aa2.58□□□□□ -2
SND1-216ENST00000492840 FAM223BA6NKX1 122 aa2.57□□□□□ -2
SND1-216ENST00000492840 MRPS14O60783 128 aaKnown RBP2.57□□□□□ -2
SND1-216ENST00000492840 RPL35P42766 123 aaKnown RBP2.57□□□□□ -2
SND1-216ENST00000492840 CCL18P55774 89 aa2.57□□□□□ -2
SND1-216ENST00000492840 NDUFA6P56556 154 aa2.57□□□□□ -2
SND1-216ENST00000492840 FXYD6P3P58550 94 aa2.57□□□□□ -2
SND1-216ENST00000492840 ESRGQ1W209 222 aa2.57□□□□□ -2
SND1-216ENST00000492840 KRTAP13-3Q3SY46 172 aa2.57□□□□□ -2
SND1-216ENST00000492840 LINC00305Q7Z4B0 112 aa2.57□□□□□ -2
SND1-216ENST00000492840 FAM223AQ8IWN6 122 aa2.57□□□□□ -2
SND1-216ENST00000492840 OR8I2Q8N0Y5 310 aa2.57□□□□□ -2
SND1-216ENST00000492840 LOC107984640A0A0U1RRK4 108 aa2.56□□□□□ -2
SND1-216ENST00000492840 C9JAW5 83 aa2.56□□□□□ -2
SND1-216ENST00000492840 IGLV3-1P01715 115 aa2.56□□□□□ -2
SND1-216ENST00000492840 ZNF705BP0CI00 300 aaPredicted RBP2.56□□□□□ -2
SND1-216ENST00000492840 SPART-AS1P0CW21 52 aa2.56□□□□□ -2
SND1-216ENST00000492840 MGST1P10620 155 aaKnown RBP2.56□□□□□ -2
SND1-216ENST00000492840 HTN3P15516 51 aa2.56□□□□□ -2
SND1-216ENST00000492840 KRTAP10-4P60372 401 aaPredicted RBP2.56□□□□□ -2
SND1-216ENST00000492840 FXYD3Q14802 87 aa2.56□□□□□ -2
SND1-216ENST00000492840 VMA21Q3ZAQ7 101 aa2.56□□□□□ -2
SND1-216ENST00000492840 Q6ZRN7 208 aaPredicted RBP2.56□□□□□ -2
SND1-216ENST00000492840 OR4K15Q8NH41 348 aa2.56□□□□□ -2
SND1-216ENST00000492840 AMELYQ99218 206 aa2.56□□□□□ -2
SND1-216ENST00000492840 TMEM14BQ9NUH8 114 aa2.56□□□□□ -2
SND1-216ENST00000492840 METTL1Q9UBP6 276 aaKnown RBP2.56□□□□□ -2
SND1-216ENST00000492840 HSPB8Q9UJY1 196 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms