RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 BTF3L4Q96K17 158 aa9.82□□□□□ -0.84
COL27A1-206ENST00000490831 F8W036 122 aa9.81□□□□□ -0.84
COL27A1-206ENST00000490831 MRPL54Q6P161 138 aaKnown RBP9.81□□□□□ -0.84
COL27A1-206ENST00000490831 C15orf56Q8N910 161 aa9.81□□□□□ -0.84
COL27A1-206ENST00000490831 CIRBP-AS1Q8TBR5 109 aa9.81□□□□□ -0.84
COL27A1-206ENST00000490831 KIR2DL4Q99706 377 aa9.81□□□□□ -0.84
COL27A1-206ENST00000490831 CDC42SE2Q9NRR3 84 aa9.81□□□□□ -0.84
COL27A1-206ENST00000490831 CSDC2Q9Y534 153 aaKnown RBP9.81□□□□□ -0.84
COL27A1-206ENST00000490831 IGKV3OR2-268A0A0C4DH90 116 aa9.8□□□□□ -0.84
COL27A1-206ENST00000490831 hDV102S1A0JD36 115 aa9.8□□□□□ -0.84
COL27A1-206ENST00000490831 SLPIP03973 132 aa9.8□□□□□ -0.84
COL27A1-206ENST00000490831 FCER1GP30273 86 aa9.8□□□□□ -0.84
COL27A1-206ENST00000490831 CKS2P33552 79 aa9.8□□□□□ -0.84
COL27A1-206ENST00000490831 CFAP161Q6P656 301 aa9.8□□□□□ -0.84
COL27A1-206ENST00000490831 SDIM1Q6ZPB5 146 aa9.8□□□□□ -0.84
COL27A1-206ENST00000490831 LINC00959A0A1B0GUT2 108 aa9.79□□□□□ -0.84
COL27A1-206ENST00000490831 PHOX2AO14813 284 aa9.79□□□□□ -0.84
COL27A1-206ENST00000490831 TNFRSF6BO95407 300 aa9.79□□□□□ -0.84
COL27A1-206ENST00000490831 IFITM2Q01629 132 aa9.79□□□□□ -0.84
COL27A1-206ENST00000490831 FOXI1Q12951 378 aa9.79□□□□□ -0.84
COL27A1-206ENST00000490831 LINC00528Q8N1L1 170 aa9.79□□□□□ -0.84
COL27A1-206ENST00000490831 ANAPC16Q96DE5 110 aa9.79□□□□□ -0.84
COL27A1-206ENST00000490831 D6R8Y8 96 aa9.78□□□□□ -0.84
COL27A1-206ENST00000490831 TCAPO15273 167 aa9.78□□□□□ -0.84
COL27A1-206ENST00000490831 PPBPP02775 128 aa9.78□□□□□ -0.84
COL27A1-206ENST00000490831 ZNF664Q8N3J9 261 aa9.78□□□□□ -0.84
COL27A1-206ENST00000490831 AP5S1Q9NUS5 200 aa9.78□□□□□ -0.84
COL27A1-206ENST00000490831 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
COL27A1-206ENST00000490831 MYCBP2O75592 4640 aa9.78□□□□□ -0.84
COL27A1-206ENST00000490831 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.77□□□□□ -0.85
COL27A1-206ENST00000490831 MT-ND4LP03901 98 aa9.77□□□□□ -0.85
COL27A1-206ENST00000490831 PLA2G1BP04054 148 aaKnown RBP9.77□□□□□ -0.85
COL27A1-206ENST00000490831 SMAGPQ0VAQ4 97 aa9.77□□□□□ -0.85
COL27A1-206ENST00000490831 CIRBPQ14011 172 aaKnown RBP9.77□□□□□ -0.85
COL27A1-206ENST00000490831 TIMM21Q9BVV7 248 aa9.77□□□□□ -0.85
COL27A1-206ENST00000490831 SMIM2Q9BVW6 85 aa9.77□□□□□ -0.85
COL27A1-206ENST00000490831 GVQW2A0A096LPI5 108 aaPredicted RBP9.76□□□□□ -0.85
COL27A1-206ENST00000490831 NPYP01303 97 aa9.76□□□□□ -0.85
COL27A1-206ENST00000490831 UQCC3Q6UW78 93 aa9.76□□□□□ -0.85
COL27A1-206ENST00000490831 FLG2Q5D862 2391 aaPredicted RBP9.75□□□□□ -0.85
COL27A1-206ENST00000490831 CCL25O15444 150 aa9.75□□□□□ -0.85
COL27A1-206ENST00000490831 XCL1P47992 114 aa9.75□□□□□ -0.85
COL27A1-206ENST00000490831 SS18Q15532 418 aa9.75□□□□□ -0.85
COL27A1-206ENST00000490831 TMEM18Q96B42 140 aa9.75□□□□□ -0.85
COL27A1-206ENST00000490831 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.75□□□□□ -0.85
COL27A1-206ENST00000490831 IGHV3-64A0A075B6Q5 118 aa9.74□□□□□ -0.85
COL27A1-206ENST00000490831 PANO1I0J062 215 aa9.74□□□□□ -0.85
COL27A1-206ENST00000490831 KRTAP10-4P60372 401 aaPredicted RBP9.74□□□□□ -0.85
COL27A1-206ENST00000490831 CD164L2Q6UWJ8 174 aa9.74□□□□□ -0.85
COL27A1-206ENST00000490831 ORMDL3Q8N138 153 aa9.74□□□□□ -0.85
COL27A1-206ENST00000490831 PRSS47A8MTI9 375 aa9.73□□□□□ -0.85
COL27A1-206ENST00000490831 ADCYAP1P18509 176 aa9.73□□□□□ -0.85
COL27A1-206ENST00000490831 TMEM136Q6ZRR5 245 aa9.73□□□□□ -0.85
COL27A1-206ENST00000490831 IGHV1-58A0A0C4DH39 117 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 TMEM218A2RU14 115 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 C1orf196B1AJZ1 125 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 HIGD2BQ4VC39 106 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 FAM104AQ969W3 186 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 PRELID3AQ96N28 172 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 IMMP2LQ96T52 175 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 LAMTOR2Q9Y2Q5 125 aa9.72□□□□□ -0.85
COL27A1-206ENST00000490831 RPL39P62891 51 aaKnown RBP9.71□□□□□ -0.86
COL27A1-206ENST00000490831 Q6ZUT4 128 aa9.71□□□□□ -0.86
COL27A1-206ENST00000490831 SPANXA1Q9NS26 97 aa9.71□□□□□ -0.86
COL27A1-206ENST00000490831 HERC1Q15751 4861 aa9.7□□□□□ -0.86
COL27A1-206ENST00000490831 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
COL27A1-206ENST00000490831 RNASE13Q5GAN3 156 aaKnown RBP9.69□□□□□ -0.86
COL27A1-206ENST00000490831 SPACA4Q8TDM5 124 aa9.69□□□□□ -0.86
COL27A1-206ENST00000490831 SEC11CQ9BY50 192 aa9.69□□□□□ -0.86
COL27A1-206ENST00000490831 DMBT1Q9UGM3 2413 aaPredicted RBP9.69□□□□□ -0.86
COL27A1-206ENST00000490831 CTDSP1Q9GZU7 261 aa9.68□□□□□ -0.86
COL27A1-206ENST00000490831 TRAV13-1A0A0B4J241 112 aa9.67□□□□□ -0.86
COL27A1-206ENST00000490831 COX7A2LO14548 114 aa9.67□□□□□ -0.86
COL27A1-206ENST00000490831 CHTF8P0CG12 524 aa9.67□□□□□ -0.86
COL27A1-206ENST00000490831 RAB5AP20339 215 aa9.67□□□□□ -0.86
COL27A1-206ENST00000490831 COX6A2Q02221 97 aa9.67□□□□□ -0.86
COL27A1-206ENST00000490831 TRAV9-1A0A075B6T8 112 aa9.66□□□□□ -0.86
COL27A1-206ENST00000490831 A0A087WYN8 130 aa9.66□□□□□ -0.86
COL27A1-206ENST00000490831 PRSS3P2Q8NHM4 247 aa9.66□□□□□ -0.86
COL27A1-206ENST00000490831 MAP1LC3AQ9H492 121 aa9.66□□□□□ -0.86
COL27A1-206ENST00000490831 PLAC8Q9NZF1 115 aa9.66□□□□□ -0.86
COL27A1-206ENST00000490831 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
COL27A1-206ENST00000490831 Q8N8P6 123 aa9.65□□□□□ -0.86
COL27A1-206ENST00000490831 OPRPNQ99935 248 aaPredicted RBP9.65□□□□□ -0.86
COL27A1-206ENST00000490831 ZNF561-AS1K7EIQ3 104 aa9.64□□□□□ -0.87
COL27A1-206ENST00000490831 MALP21145 153 aa9.64□□□□□ -0.87
COL27A1-206ENST00000490831 RPL37AP61513 92 aaKnown RBP9.64□□□□□ -0.87
COL27A1-206ENST00000490831 C10orf91Q5T1B1 145 aa9.64□□□□□ -0.87
COL27A1-206ENST00000490831 COMMD7Q86VX2 200 aa9.64□□□□□ -0.87
COL27A1-206ENST00000490831 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
COL27A1-206ENST00000490831 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
COL27A1-206ENST00000490831 PKIGQ9Y2B9 76 aa9.64□□□□□ -0.87
COL27A1-206ENST00000490831 PKHD1L1Q86WI1 4243 aa9.63□□□□□ -0.87
COL27A1-206ENST00000490831 IGHV3OR16-9A0A0B4J2B5 98 aa9.63□□□□□ -0.87
COL27A1-206ENST00000490831 LOC389332A0A1B0GUA5 103 aa9.63□□□□□ -0.87
COL27A1-206ENST00000490831 K7EMI3 77 aa9.63□□□□□ -0.87
COL27A1-206ENST00000490831 IFI27P40305 119 aaPredicted RBP9.63□□□□□ -0.87
COL27A1-206ENST00000490831 SYCNQ0VAF6 134 aa9.63□□□□□ -0.87
COL27A1-206ENST00000490831 IGLV4-69A0A075B6H9 119 aa9.62□□□□□ -0.87
COL27A1-206ENST00000490831 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms