RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 MIR7-3HGQ8N6C7 128 aa9.52□□□□□ -0.89
SHOX2-205ENST00000490689 KALRNO60229 2985 aa9.52□□□□□ -0.89
SHOX2-205ENST00000490689 POM121L12Q8N7R1 296 aa9.52□□□□□ -0.89
SHOX2-205ENST00000490689 PRB1P04280 392 aa9.51□□□□□ -0.89
SHOX2-205ENST00000490689 XCL1P47992 114 aa9.51□□□□□ -0.89
SHOX2-205ENST00000490689 OVOL2Q9BRP0 275 aa9.51□□□□□ -0.89
SHOX2-205ENST00000490689 TMEM61Q8N0U2 210 aa9.51□□□□□ -0.89
SHOX2-205ENST00000490689 ADAMTSL4-AS1Q5T5F5 129 aa9.51□□□□□ -0.89
SHOX2-205ENST00000490689 LINC00643Q86TS7 51 aa9.51□□□□□ -0.89
SHOX2-205ENST00000490689 ADGRG4Q8IZF6 3080 aa9.5□□□□□ -0.89
SHOX2-205ENST00000490689 K7EMT4 169 aa9.5□□□□□ -0.89
SHOX2-205ENST00000490689 LINC00308Q8TCZ7 52 aa9.5□□□□□ -0.89
SHOX2-205ENST00000490689 DNAJC30Q96LL9 226 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 WDFY3Q8IZQ1 3526 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 KLLNB2CW77 178 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 COX7A2LO14548 114 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 ELANEP08246 267 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 TACC2O95359 2948 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 TRBV6-5A0A0K0K1A5 114 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 LST1O00453 97 aa9.49□□□□□ -0.89
SHOX2-205ENST00000490689 FBXL19-AS1Q494R0 122 aa9.48□□□□□ -0.89
SHOX2-205ENST00000490689 SLPIP03973 132 aa9.48□□□□□ -0.89
SHOX2-205ENST00000490689 LINC01356Q8N9X3 169 aa9.48□□□□□ -0.89
SHOX2-205ENST00000490689 K7EQG2 157 aa9.47□□□□□ -0.89
SHOX2-205ENST00000490689 UBL5Q9BZL1 73 aa9.47□□□□□ -0.89
SHOX2-205ENST00000490689 hADV29S1A0JD25 119 aa9.47□□□□□ -0.89
SHOX2-205ENST00000490689 FHL3Q13643 280 aa9.47□□□□□ -0.89
SHOX2-205ENST00000490689 NDUFA7O95182 113 aa9.47□□□□□ -0.89
SHOX2-205ENST00000490689 A6NDX4 124 aa9.46□□□□□ -0.89
SHOX2-205ENST00000490689 ATOX1O00244 68 aa9.46□□□□□ -0.89
SHOX2-205ENST00000490689 PF4P02776 101 aa9.46□□□□□ -0.89
SHOX2-205ENST00000490689 SS18Q15532 418 aa9.46□□□□□ -0.89
SHOX2-205ENST00000490689 ACANP16112 2415 aa9.46□□□□□ -0.9
SHOX2-205ENST00000490689 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
SHOX2-205ENST00000490689 C11orf71Q6IPW1 123 aa9.45□□□□□ -0.9
SHOX2-205ENST00000490689 J3KT08 172 aa9.45□□□□□ -0.9
SHOX2-205ENST00000490689 COX7B2Q8TF08 81 aa9.45□□□□□ -0.9
SHOX2-205ENST00000490689 IGLV10-54A0A075B6I4 117 aa9.45□□□□□ -0.9
SHOX2-205ENST00000490689 DCANP1Q8TF63 244 aa9.45□□□□□ -0.9
SHOX2-205ENST00000490689 ORMDL1Q9P0S3 153 aa9.45□□□□□ -0.9
SHOX2-205ENST00000490689 DMXL2Q8TDJ6 3036 aa9.44□□□□□ -0.9
SHOX2-205ENST00000490689 UQCRQO14949 82 aa9.44□□□□□ -0.9
SHOX2-205ENST00000490689 A0A1W2PPR1 153 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 HIST2H2BCQ6DN03 193 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 Q6ZTI0 123 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 C10orf105Q8TEF2 133 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 C9orf85Q96MD7 179 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 TRAV23DV6A0A075B6W5 121 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 K7EQD1 137 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 SHISA2Q6UWI4 295 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 C3orf22Q8N5N4 141 aa9.43□□□□□ -0.9
SHOX2-205ENST00000490689 KLK5Q9Y337 293 aaPredicted RBP9.43□□□□□ -0.9
SHOX2-205ENST00000490689 NCR3O14931 201 aa9.42□□□□□ -0.9
SHOX2-205ENST00000490689 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
SHOX2-205ENST00000490689 RBMY1FQ15415 496 aaKnown RBP9.42□□□□□ -0.9
SHOX2-205ENST00000490689 LINC00694P0DN24 101 aa9.42□□□□□ -0.9
SHOX2-205ENST00000490689 TIRAPP58753 221 aa9.42□□□□□ -0.9
SHOX2-205ENST00000490689 MRPS36P82909 103 aaKnown RBP9.42□□□□□ -0.9
SHOX2-205ENST00000490689 ODF3Q96PU9 254 aa9.42□□□□□ -0.9
SHOX2-205ENST00000490689 ESM1Q9NQ30 184 aa9.42□□□□□ -0.9
SHOX2-205ENST00000490689 KIF25-AS1Q9Y6Z4 181 aa9.42□□□□□ -0.9
SHOX2-205ENST00000490689 NDUFA1O15239 70 aa9.41□□□□□ -0.9
SHOX2-205ENST00000490689 H0YGX0 51 aa9.41□□□□□ -0.9
SHOX2-205ENST00000490689 SPANXDQ9BXN6 97 aa9.41□□□□□ -0.9
SHOX2-205ENST00000490689 SPANXCQ9NY87 97 aa9.41□□□□□ -0.9
SHOX2-205ENST00000490689 UBE2D4Q9Y2X8 147 aa9.41□□□□□ -0.9
SHOX2-205ENST00000490689 PYGO1Q9Y3Y4 419 aa9.41□□□□□ -0.9
SHOX2-205ENST00000490689 EPG5Q9HCE0 2579 aa9.4□□□□□ -0.9
SHOX2-205ENST00000490689 LINC00315P59091 139 aa9.4□□□□□ -0.9
SHOX2-205ENST00000490689 LOC400499M0QZD8 3231 aa9.4□□□□□ -0.91
SHOX2-205ENST00000490689 ANGP03950 147 aaKnown RBP9.39□□□□□ -0.91
SHOX2-205ENST00000490689 DSCR9P59020 149 aa9.39□□□□□ -0.91
SHOX2-205ENST00000490689 Q9UF83 564 aa9.39□□□□□ -0.91
SHOX2-205ENST00000490689 MUC4Q99102 2169 aa9.38□□□□□ -0.91
SHOX2-205ENST00000490689 Q6Q795 121 aa9.38□□□□□ -0.91
SHOX2-205ENST00000490689 MAP6D1Q9H9H5 199 aa9.38□□□□□ -0.91
SHOX2-205ENST00000490689 SVIPQ8NHG7 77 aa9.38□□□□□ -0.91
SHOX2-205ENST00000490689 M0QXV9 152 aa9.38□□□□□ -0.91
SHOX2-205ENST00000490689 COX6A2Q02221 97 aa9.38□□□□□ -0.91
SHOX2-205ENST00000490689 C20orf197Q8N268 126 aa9.37□□□□□ -0.91
SHOX2-205ENST00000490689 A0A087WVE0 104 aa9.37□□□□□ -0.91
SHOX2-205ENST00000490689 GHRHP01286 108 aa9.37□□□□□ -0.91
SHOX2-205ENST00000490689 C18orf65Q6ZTR6 163 aa9.37□□□□□ -0.91
SHOX2-205ENST00000490689 Q6ZSN1 163 aa9.37□□□□□ -0.91
SHOX2-205ENST00000490689 LOC107984640A0A0U1RRK4 108 aa9.36□□□□□ -0.91
SHOX2-205ENST00000490689 RBM3P98179 157 aaKnown RBP9.36□□□□□ -0.91
SHOX2-205ENST00000490689 ANKRD17O75179 2603 aaKnown RBP9.36□□□□□ -0.91
SHOX2-205ENST00000490689 DSCR8Q96T75 97 aa9.36□□□□□ -0.91
SHOX2-205ENST00000490689 LINC00242Q5T6M2 205 aa9.35□□□□□ -0.91
SHOX2-205ENST00000490689 WFDC9Q8NEX5 89 aa9.35□□□□□ -0.91
SHOX2-205ENST00000490689 PPDPFQ9H3Y8 114 aa9.35□□□□□ -0.91
SHOX2-205ENST00000490689 TRAV25A0A0B4J276 109 aa9.34□□□□□ -0.91
SHOX2-205ENST00000490689 AVPP01185 164 aa9.34□□□□□ -0.91
SHOX2-205ENST00000490689 GYPEP15421 78 aa9.34□□□□□ -0.91
SHOX2-205ENST00000490689 PSMB8P28062 276 aa9.34□□□□□ -0.91
SHOX2-205ENST00000490689 CCL24O00175 119 aa9.34□□□□□ -0.91
SHOX2-205ENST00000490689 ZNF462Q96JM2 2506 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 LOC100131303A0A0U1RQF7 123 aa9.33□□□□□ -0.92
SHOX2-205ENST00000490689 FAM240AA0A1B0GVK7 77 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms