RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 TMEM242Q9NWH2 141 aa9.56□□□□□ -0.88
COL2A1-207ENST00000490609 TEX46H3BTG2 121 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 PMCHP20382 165 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 PTTG1IPP53801 180 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 SYCNQ0VAF6 134 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 TEX261Q6UWH6 196 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 CD164L2Q6UWJ8 174 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 Q6ZRP5 223 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 FAM231DQ6ZW35 169 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 LINC00474Q9P2X8 69 aa9.55□□□□□ -0.88
COL2A1-207ENST00000490609 MUC2Q02817 5179 aa9.54□□□□□ -0.88
COL2A1-207ENST00000490609 ZNF664Q8N3J9 261 aa9.54□□□□□ -0.88
COL2A1-207ENST00000490609 TRBV27A0A0K0K1C4 114 aa9.53□□□□□ -0.88
COL2A1-207ENST00000490609 GATCO43716 136 aaKnown RBP9.53□□□□□ -0.88
COL2A1-207ENST00000490609 RAB4AP20338 218 aa9.53□□□□□ -0.88
COL2A1-207ENST00000490609 REG3GQ6UW15 175 aa9.53□□□□□ -0.88
COL2A1-207ENST00000490609 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
COL2A1-207ENST00000490609 NUP35Q8NFH5 326 aa9.52□□□□□ -0.89
COL2A1-207ENST00000490609 FAM104AQ969W3 186 aa9.52□□□□□ -0.89
COL2A1-207ENST00000490609 ST20Q9HBF5 79 aa9.52□□□□□ -0.89
COL2A1-207ENST00000490609 A8MWL6 223 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 TAGLN2P37802 199 aaKnown RBP9.51□□□□□ -0.89
COL2A1-207ENST00000490609 CAMPP49913 170 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 SS18Q15532 418 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 SMIM15Q7Z3B0 74 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 TMEM101Q96IK0 257 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 BTF3L4Q96K17 158 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 TMEM191AQ9H0A3 160 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 PSORS1C2Q9UIG4 136 aa9.51□□□□□ -0.89
COL2A1-207ENST00000490609 TMEM250H0YL14 139 aa9.5□□□□□ -0.89
COL2A1-207ENST00000490609 SMKR1H3BMG3 65 aa9.5□□□□□ -0.89
COL2A1-207ENST00000490609 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.5□□□□□ -0.89
COL2A1-207ENST00000490609 GAGE2BQ13066 116 aa9.5□□□□□ -0.89
COL2A1-207ENST00000490609 CT83Q5H943 113 aa9.5□□□□□ -0.89
COL2A1-207ENST00000490609 MRAP2Q96G30 205 aa9.5□□□□□ -0.89
COL2A1-207ENST00000490609 LOC107984640A0A0U1RRK4 108 aa9.49□□□□□ -0.89
COL2A1-207ENST00000490609 ZNF561-AS1K7EIQ3 104 aa9.49□□□□□ -0.89
COL2A1-207ENST00000490609 RNASE13Q5GAN3 156 aaKnown RBP9.49□□□□□ -0.89
COL2A1-207ENST00000490609 KRTAP11-1Q8IUC1 163 aa9.49□□□□□ -0.89
COL2A1-207ENST00000490609 AMN1Q8IY45 258 aa9.49□□□□□ -0.89
COL2A1-207ENST00000490609 NRACQ8N912 160 aa9.49□□□□□ -0.89
COL2A1-207ENST00000490609 UBE2D4Q9Y2X8 147 aa9.49□□□□□ -0.89
COL2A1-207ENST00000490609 HIGD1CA8MV81 97 aa9.48□□□□□ -0.89
COL2A1-207ENST00000490609 FAM210AQ96ND0 272 aa9.48□□□□□ -0.89
COL2A1-207ENST00000490609 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
COL2A1-207ENST00000490609 A0A1B0GUT8 65 aa9.47□□□□□ -0.89
COL2A1-207ENST00000490609 C7orf77A4D0Y5 90 aa9.47□□□□□ -0.89
COL2A1-207ENST00000490609 C9orf116Q5BN46 136 aaPredicted RBP9.47□□□□□ -0.89
COL2A1-207ENST00000490609 PHF5AQ7RTV0 110 aaKnown RBP9.47□□□□□ -0.89
COL2A1-207ENST00000490609 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
COL2A1-207ENST00000490609 TSKUQ8WUA8 353 aa9.47□□□□□ -0.89
COL2A1-207ENST00000490609 C1orf196B1AJZ1 125 aa9.46□□□□□ -0.9
COL2A1-207ENST00000490609 OPRPNQ99935 248 aaPredicted RBP9.46□□□□□ -0.9
COL2A1-207ENST00000490609 COX7A2LO14548 114 aa9.45□□□□□ -0.9
COL2A1-207ENST00000490609 APOMO95445 188 aa9.45□□□□□ -0.9
COL2A1-207ENST00000490609 ALKAL2Q6UX46 152 aa9.45□□□□□ -0.9
COL2A1-207ENST00000490609 C5orf38Q86SI9 138 aa9.45□□□□□ -0.9
COL2A1-207ENST00000490609 C2orf48Q96LS8 159 aa9.45□□□□□ -0.9
COL2A1-207ENST00000490609 PKIGQ9Y2B9 76 aa9.45□□□□□ -0.9
COL2A1-207ENST00000490609 VCYO14598 125 aa9.44□□□□□ -0.9
COL2A1-207ENST00000490609 BLOC1S1P78537 153 aa9.44□□□□□ -0.9
COL2A1-207ENST00000490609 Q6ZUT4 128 aa9.44□□□□□ -0.9
COL2A1-207ENST00000490609 KRTAP7-1Q8IUC3 87 aa9.44□□□□□ -0.9
COL2A1-207ENST00000490609 CAMK2N2Q96S95 79 aa9.44□□□□□ -0.9
COL2A1-207ENST00000490609 V9GYV3 84 aa9.44□□□□□ -0.9
COL2A1-207ENST00000490609 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
COL2A1-207ENST00000490609 ISOC2Q96AB3 205 aa9.43□□□□□ -0.9
COL2A1-207ENST00000490609 OSTCQ9NRP0 149 aa9.43□□□□□ -0.9
COL2A1-207ENST00000490609 FAM168BA1KXE4 195 aa9.42□□□□□ -0.9
COL2A1-207ENST00000490609 MALP21145 153 aa9.42□□□□□ -0.9
COL2A1-207ENST00000490609 CEBPGP53567 150 aa9.42□□□□□ -0.9
COL2A1-207ENST00000490609 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
COL2A1-207ENST00000490609 RNF151Q2KHN1 245 aa9.42□□□□□ -0.9
COL2A1-207ENST00000490609 C1orf137Q5JT78 98 aa9.42□□□□□ -0.9
COL2A1-207ENST00000490609 C10orf25Q5T742 122 aa9.42□□□□□ -0.9
COL2A1-207ENST00000490609 PRR26Q8N8Z3 221 aa9.42□□□□□ -0.9
COL2A1-207ENST00000490609 SRP19P09132 144 aaKnown RBP9.41□□□□□ -0.9
COL2A1-207ENST00000490609 MRPL51Q4U2R6 128 aaKnown RBP9.41□□□□□ -0.9
COL2A1-207ENST00000490609 SMIM7Q9BQ49 75 aa9.41□□□□□ -0.9
COL2A1-207ENST00000490609 TIMM21Q9BVV7 248 aa9.41□□□□□ -0.9
COL2A1-207ENST00000490609 IGHV3OR16-9A0A0B4J2B5 98 aa9.4□□□□□ -0.9
COL2A1-207ENST00000490609 MT-ND6P03923 174 aa9.4□□□□□ -0.9
COL2A1-207ENST00000490609 RPL39P62891 51 aaKnown RBP9.4□□□□□ -0.9
COL2A1-207ENST00000490609 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
COL2A1-207ENST00000490609 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
COL2A1-207ENST00000490609 KRTAP1-4P0C5Y4 121 aa9.39□□□□□ -0.91
COL2A1-207ENST00000490609 FCER1GP30273 86 aa9.39□□□□□ -0.91
COL2A1-207ENST00000490609 RPL18AQ02543 176 aaKnown RBP9.39□□□□□ -0.91
COL2A1-207ENST00000490609 SPAG11BQ08648 103 aa9.39□□□□□ -0.91
COL2A1-207ENST00000490609 FAM104BQ5XKR9 115 aa9.39□□□□□ -0.91
COL2A1-207ENST00000490609 TRBV24-1A0A075B6N3 115 aa9.38□□□□□ -0.91
COL2A1-207ENST00000490609 MRPL35Q9NZE8 188 aaKnown RBP9.38□□□□□ -0.91
COL2A1-207ENST00000490609 ZNF727A8MUV8 499 aa9.37□□□□□ -0.91
COL2A1-207ENST00000490609 RIGQ13278 110 aa9.37□□□□□ -0.91
COL2A1-207ENST00000490609 UNQ6190/PRO20217Q6UXQ8 127 aa9.37□□□□□ -0.91
COL2A1-207ENST00000490609 OR10D4PQ8NGN7 298 aa9.37□□□□□ -0.91
COL2A1-207ENST00000490609 C9JQL5 133 aa9.36□□□□□ -0.91
COL2A1-207ENST00000490609 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
COL2A1-207ENST00000490609 RPL32P62910 135 aaKnown RBP9.36□□□□□ -0.91
COL2A1-207ENST00000490609 KIAA0087Q14695 138 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 92.7 ms