RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 HMCN2Q8NDA2 5059 aa12.45□□□□□ -0.42
APTX-229ENST00000489583 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
APTX-229ENST00000489583 COTL1Q14019 142 aa12.45□□□□□ -0.42
APTX-229ENST00000489583 TRAV9-1A0A075B6T8 112 aa12.44□□□□□ -0.42
APTX-229ENST00000489583 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
APTX-229ENST00000489583 A0A1B0GXF2 115 aa12.43□□□□□ -0.42
APTX-229ENST00000489583 AMTP48728 403 aa12.43□□□□□ -0.42
APTX-229ENST00000489583 NIT2Q9NQR4 276 aa12.43□□□□□ -0.42
APTX-229ENST00000489583 FAT3Q8TDW7 4589 aa12.42□□□□□ -0.42
APTX-229ENST00000489583 PANO1I0J062 215 aa12.42□□□□□ -0.42
APTX-229ENST00000489583 AMN1Q8IY45 258 aa12.42□□□□□ -0.42
APTX-229ENST00000489583 C20orf203Q8NBC4 194 aa12.42□□□□□ -0.42
APTX-229ENST00000489583 MRAP2Q96G30 205 aa12.42□□□□□ -0.42
APTX-229ENST00000489583 A0A087WYN8 130 aa12.41□□□□□ -0.42
APTX-229ENST00000489583 RAB4AP20338 218 aa12.41□□□□□ -0.42
APTX-229ENST00000489583 CIRBPQ14011 172 aaKnown RBP12.41□□□□□ -0.42
APTX-229ENST00000489583 FAM104BQ5XKR9 115 aa12.41□□□□□ -0.42
APTX-229ENST00000489583 AMMECR1LQ6DCA0 310 aa12.41□□□□□ -0.42
APTX-229ENST00000489583 GATD1Q8NB37 220 aa12.41□□□□□ -0.42
APTX-229ENST00000489583 IGLV4-60A0A075B6I1 120 aa12.4□□□□□ -0.42
APTX-229ENST00000489583 TRAV26-2A0A0B4J265 109 aa12.4□□□□□ -0.42
APTX-229ENST00000489583 PPP1R17O96001 155 aa12.4□□□□□ -0.42
APTX-229ENST00000489583 UBR4Q5T4S7 5183 aa12.4□□□□□ -0.42
APTX-229ENST00000489583 IGKV3OR2-268A0A0C4DH90 116 aa12.39□□□□□ -0.43
APTX-229ENST00000489583 RPS10P46783 165 aaKnown RBP12.38□□□□□ -0.43
APTX-229ENST00000489583 SPACA4Q8TDM5 124 aa12.38□□□□□ -0.43
APTX-229ENST00000489583 PKIGQ9Y2B9 76 aa12.38□□□□□ -0.43
APTX-229ENST00000489583 GAGE12HA6NDE8 117 aa12.37□□□□□ -0.43
APTX-229ENST00000489583 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
APTX-229ENST00000489583 MRPL51Q4U2R6 128 aaKnown RBP12.37□□□□□ -0.43
APTX-229ENST00000489583 PPBPP02775 128 aa12.36□□□□□ -0.43
APTX-229ENST00000489583 CKS2P33552 79 aa12.36□□□□□ -0.43
APTX-229ENST00000489583 MAJINQ3KP22 176 aa12.36□□□□□ -0.43
APTX-229ENST00000489583 COX19Q49B96 90 aa12.36□□□□□ -0.43
APTX-229ENST00000489583 PHOX2AO14813 284 aa12.35□□□□□ -0.43
APTX-229ENST00000489583 COX6A2Q02221 97 aa12.35□□□□□ -0.43
APTX-229ENST00000489583 RNASEKQ6P5S7 137 aaKnown RBP12.35□□□□□ -0.43
APTX-229ENST00000489583 RPL39LQ96EH5 51 aaKnown RBP12.35□□□□□ -0.43
APTX-229ENST00000489583 ST20Q9HBF5 79 aa12.35□□□□□ -0.43
APTX-229ENST00000489583 PLAC8Q9NZF1 115 aa12.35□□□□□ -0.43
APTX-229ENST00000489583 PKHD1L1Q86WI1 4243 aa12.34□□□□□ -0.43
APTX-229ENST00000489583 IGKV2-24A0A0C4DH68 120 aa12.34□□□□□ -0.43
APTX-229ENST00000489583 TRBV6-5A0A0K0K1A5 114 aa12.34□□□□□ -0.43
APTX-229ENST00000489583 NCR2O95944 276 aa12.33□□□□□ -0.44
APTX-229ENST00000489583 MT1HL1P0DM35 61 aa12.33□□□□□ -0.44
APTX-229ENST00000489583 HIGD2BQ4VC39 106 aa12.33□□□□□ -0.44
APTX-229ENST00000489583 ORMDL3Q8N138 153 aa12.33□□□□□ -0.44
APTX-229ENST00000489583 SMCO4Q9NRQ5 59 aa12.33□□□□□ -0.44
APTX-229ENST00000489583 LINC00474Q9P2X8 69 aa12.33□□□□□ -0.44
APTX-229ENST00000489583 SDHAF1A6NFY7 115 aa12.32□□□□□ -0.44
APTX-229ENST00000489583 SMKR1H3BMG3 65 aa12.32□□□□□ -0.44
APTX-229ENST00000489583 SLPIP03973 132 aa12.32□□□□□ -0.44
APTX-229ENST00000489583 GNB1LQ9BYB4 327 aa12.32□□□□□ -0.44
APTX-229ENST00000489583 D6R8Y8 96 aa12.31□□□□□ -0.44
APTX-229ENST00000489583 H7C423 109 aa12.31□□□□□ -0.44
APTX-229ENST00000489583 APCSP02743 223 aa12.31□□□□□ -0.44
APTX-229ENST00000489583 MT-ND6P03923 174 aa12.31□□□□□ -0.44
APTX-229ENST00000489583 TMEM136Q6ZRR5 245 aa12.31□□□□□ -0.44
APTX-229ENST00000489583 STPG4Q8N801 248 aa12.31□□□□□ -0.44
APTX-229ENST00000489583 CHCHD10Q8WYQ3 142 aaPredicted RBP12.31□□□□□ -0.44
APTX-229ENST00000489583 TMEM101Q96IK0 257 aa12.31□□□□□ -0.44
APTX-229ENST00000489583 I3L3M4 83 aa12.3□□□□□ -0.44
APTX-229ENST00000489583 GAS8-AS1O95177 125 aa12.3□□□□□ -0.44
APTX-229ENST00000489583 PMCHP20382 165 aa12.3□□□□□ -0.44
APTX-229ENST00000489583 SUMO2P61956 95 aaKnown RBP12.3□□□□□ -0.44
APTX-229ENST00000489583 C15orf56Q8N910 161 aa12.3□□□□□ -0.44
APTX-229ENST00000489583 NRACQ8N912 160 aa12.3□□□□□ -0.44
APTX-229ENST00000489583 C20orf78Q9BR46 151 aa12.3□□□□□ -0.44
APTX-229ENST00000489583 LAMTOR2Q9Y2Q5 125 aa12.3□□□□□ -0.44
APTX-229ENST00000489583 TRBV24-1A0A075B6N3 115 aa12.29□□□□□ -0.44
APTX-229ENST00000489583 VCYO14598 125 aa12.29□□□□□ -0.44
APTX-229ENST00000489583 PRELID3AQ96N28 172 aa12.29□□□□□ -0.44
APTX-229ENST00000489583 TGIF2-C20orf24A0A0A6YYL0 155 aa12.28□□□□□ -0.44
APTX-229ENST00000489583 TNFRSF6BO95407 300 aa12.28□□□□□ -0.44
APTX-229ENST00000489583 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
APTX-229ENST00000489583 ZNF25P17030 456 aaPredicted RBP12.27□□□□□ -0.45
APTX-229ENST00000489583 REG3GQ6UW15 175 aa12.27□□□□□ -0.45
APTX-229ENST00000489583 KIR2DL4Q99706 377 aa12.27□□□□□ -0.45
APTX-229ENST00000489583 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.26□□□□□ -0.45
APTX-229ENST00000489583 GVQW2A0A096LPI5 108 aaPredicted RBP12.26□□□□□ -0.45
APTX-229ENST00000489583 TRBV27A0A0K0K1C4 114 aa12.26□□□□□ -0.45
APTX-229ENST00000489583 IGKV2-29A2NJV5 120 aaPredicted RBP12.26□□□□□ -0.45
APTX-229ENST00000489583 FGF6P10767 208 aa12.26□□□□□ -0.45
APTX-229ENST00000489583 POLR2KP53803 58 aaKnown RBP12.26□□□□□ -0.45
APTX-229ENST00000489583 TCAPO15273 167 aa12.25□□□□□ -0.45
APTX-229ENST00000489583 NPYP01303 97 aa12.25□□□□□ -0.45
APTX-229ENST00000489583 FCER1GP30273 86 aa12.25□□□□□ -0.45
APTX-229ENST00000489583 RPL32P62910 135 aaKnown RBP12.25□□□□□ -0.45
APTX-229ENST00000489583 PRR3P79522 188 aaKnown RBP12.25□□□□□ -0.45
APTX-229ENST00000489583 CBLN2Q8IUK8 224 aa12.25□□□□□ -0.45
APTX-229ENST00000489583 ZNF561-AS1K7EIQ3 104 aa12.24□□□□□ -0.45
APTX-229ENST00000489583 XCL1P47992 114 aa12.24□□□□□ -0.45
APTX-229ENST00000489583 FABP9Q0Z7S8 132 aa12.24□□□□□ -0.45
APTX-229ENST00000489583 OR5A1Q8NGJ0 315 aa12.24□□□□□ -0.45
APTX-229ENST00000489583 LINC01600Q96MT4 127 aa12.24□□□□□ -0.45
APTX-229ENST00000489583 MRPL18Q9H0U6 180 aaKnown RBP12.24□□□□□ -0.45
APTX-229ENST00000489583 MAP1LC3AQ9H492 121 aa12.24□□□□□ -0.45
APTX-229ENST00000489583 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
APTX-229ENST00000489583 IGHV1-58A0A0C4DH39 117 aa12.23□□□□□ -0.45
APTX-229ENST00000489583 SS18Q15532 418 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms