RNA–Protein interactions for RNA: ENST00000489581.1

TOP3B-217, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-217ENST00000489581 RPP21Q9H633 154 aaKnown RBP10.43□□□□□ -0.74
TOP3B-217ENST00000489581 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
TOP3B-217ENST00000489581 I3L3M4 83 aa10.42□□□□□ -0.74
TOP3B-217ENST00000489581 SS18Q15532 418 aa10.42□□□□□ -0.74
TOP3B-217ENST00000489581 SMIM15Q7Z3B0 74 aa10.42□□□□□ -0.74
TOP3B-217ENST00000489581 BATF3Q9NR55 127 aa10.42□□□□□ -0.74
TOP3B-217ENST00000489581 LOC107984640A0A0U1RRK4 108 aa10.41□□□□□ -0.74
TOP3B-217ENST00000489581 TEX46H3BTG2 121 aa10.41□□□□□ -0.74
TOP3B-217ENST00000489581 CAMPP49913 170 aa10.41□□□□□ -0.74
TOP3B-217ENST00000489581 TEX261Q6UWH6 196 aa10.41□□□□□ -0.74
TOP3B-217ENST00000489581 CD164L2Q6UWJ8 174 aa10.41□□□□□ -0.74
TOP3B-217ENST00000489581 K7EN84 100 aa10.4□□□□□ -0.74
TOP3B-217ENST00000489581 ESDP10768 282 aa10.4□□□□□ -0.74
TOP3B-217ENST00000489581 RGS21Q2M5E4 152 aa10.4□□□□□ -0.74
TOP3B-217ENST00000489581 CDC42SE2Q9NRR3 84 aa10.4□□□□□ -0.74
TOP3B-217ENST00000489581 PSORS1C2Q9UIG4 136 aa10.4□□□□□ -0.74
TOP3B-217ENST00000489581 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
TOP3B-217ENST00000489581 TSHBP01222 138 aa10.39□□□□□ -0.75
TOP3B-217ENST00000489581 BCL2P10415 239 aa10.39□□□□□ -0.75
TOP3B-217ENST00000489581 OCC1Q8TAD7 63 aa10.39□□□□□ -0.75
TOP3B-217ENST00000489581 MRAP2Q96G30 205 aa10.39□□□□□ -0.75
TOP3B-217ENST00000489581 TMEM242Q9NWH2 141 aa10.39□□□□□ -0.75
TOP3B-217ENST00000489581 TRBV6-5A0A0K0K1A5 114 aa10.38□□□□□ -0.75
TOP3B-217ENST00000489581 MT-ND6P03923 174 aa10.38□□□□□ -0.75
TOP3B-217ENST00000489581 EIF5AL1Q6IS14 154 aaKnown RBP10.38□□□□□ -0.75
TOP3B-217ENST00000489581 ISOC2Q96AB3 205 aa10.38□□□□□ -0.75
TOP3B-217ENST00000489581 C9orf116Q5BN46 136 aaPredicted RBP10.37□□□□□ -0.75
TOP3B-217ENST00000489581 ZNF664Q8N3J9 261 aa10.37□□□□□ -0.75
TOP3B-217ENST00000489581 NUP35Q8NFH5 326 aa10.37□□□□□ -0.75
TOP3B-217ENST00000489581 ST20Q9HBF5 79 aa10.37□□□□□ -0.75
TOP3B-217ENST00000489581 MALP21145 153 aa10.36□□□□□ -0.75
TOP3B-217ENST00000489581 C1orf137Q5JT78 98 aa10.36□□□□□ -0.75
TOP3B-217ENST00000489581 MRPL52Q86TS9 123 aaKnown RBP10.36□□□□□ -0.75
TOP3B-217ENST00000489581 CAMK2N2Q96S95 79 aa10.36□□□□□ -0.75
TOP3B-217ENST00000489581 PHF5AQ7RTV0 110 aaKnown RBP10.35□□□□□ -0.75
TOP3B-217ENST00000489581 PRR26Q8N8Z3 221 aa10.35□□□□□ -0.75
TOP3B-217ENST00000489581 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.34□□□□□ -0.75
TOP3B-217ENST00000489581 COX7A2LO14548 114 aa10.34□□□□□ -0.75
TOP3B-217ENST00000489581 GATCO43716 136 aaKnown RBP10.34□□□□□ -0.75
TOP3B-217ENST00000489581 APOMO95445 188 aa10.34□□□□□ -0.75
TOP3B-217ENST00000489581 POLR2KP53803 58 aaKnown RBP10.34□□□□□ -0.75
TOP3B-217ENST00000489581 RPL18AQ02543 176 aaKnown RBP10.34□□□□□ -0.75
TOP3B-217ENST00000489581 C7orf77A4D0Y5 90 aa10.33□□□□□ -0.76
TOP3B-217ENST00000489581 C1orf196B1AJZ1 125 aa10.33□□□□□ -0.76
TOP3B-217ENST00000489581 RNASE13Q5GAN3 156 aaKnown RBP10.33□□□□□ -0.76
TOP3B-217ENST00000489581 OPRPNQ99935 248 aaPredicted RBP10.33□□□□□ -0.76
TOP3B-217ENST00000489581 A8MWL6 223 aa10.32□□□□□ -0.76
TOP3B-217ENST00000489581 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
TOP3B-217ENST00000489581 TRAV13-1A0A0B4J241 112 aa10.31□□□□□ -0.76
TOP3B-217ENST00000489581 TRBV27A0A0K0K1C4 114 aa10.31□□□□□ -0.76
TOP3B-217ENST00000489581 C2orf48Q96LS8 159 aa10.31□□□□□ -0.76
TOP3B-217ENST00000489581 FAM210AQ96ND0 272 aa10.31□□□□□ -0.76
TOP3B-217ENST00000489581 TAGLN2P37802 199 aaKnown RBP10.3□□□□□ -0.76
TOP3B-217ENST00000489581 DIRC1Q969H9 104 aa10.3□□□□□ -0.76
TOP3B-217ENST00000489581 IGLV7-43P04211 117 aa10.29□□□□□ -0.76
TOP3B-217ENST00000489581 RAB4AP20338 218 aa10.29□□□□□ -0.76
TOP3B-217ENST00000489581 BORCS7Q96B45 105 aa10.29□□□□□ -0.76
TOP3B-217ENST00000489581 FCER1GP30273 86 aa10.28□□□□□ -0.76
TOP3B-217ENST00000489581 SPAG11BQ08648 103 aa10.28□□□□□ -0.76
TOP3B-217ENST00000489581 FAM231DQ6ZW35 169 aa10.28□□□□□ -0.76
TOP3B-217ENST00000489581 AMN1Q8IY45 258 aa10.28□□□□□ -0.76
TOP3B-217ENST00000489581 TMEM191AQ9H0A3 160 aa10.28□□□□□ -0.76
TOP3B-217ENST00000489581 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
TOP3B-217ENST00000489581 A0A087WZ39 114 aa10.27□□□□□ -0.77
TOP3B-217ENST00000489581 A0A1B0GUT8 65 aa10.27□□□□□ -0.77
TOP3B-217ENST00000489581 SMKR1H3BMG3 65 aa10.27□□□□□ -0.77
TOP3B-217ENST00000489581 VCYO14598 125 aa10.27□□□□□ -0.77
TOP3B-217ENST00000489581 KRTAP11-1Q8IUC1 163 aa10.27□□□□□ -0.77
TOP3B-217ENST00000489581 CSDC2Q9Y534 153 aaKnown RBP10.27□□□□□ -0.77
TOP3B-217ENST00000489581 RNF151Q2KHN1 245 aa10.26□□□□□ -0.77
TOP3B-217ENST00000489581 FAM168BA1KXE4 195 aa10.25□□□□□ -0.77
TOP3B-217ENST00000489581 HIGD1CA8MV81 97 aa10.25□□□□□ -0.77
TOP3B-217ENST00000489581 H0Y9J4 135 aa10.25□□□□□ -0.77
TOP3B-217ENST00000489581 CT83Q5H943 113 aa10.25□□□□□ -0.77
TOP3B-217ENST00000489581 Q6ZUT4 128 aa10.25□□□□□ -0.77
TOP3B-217ENST00000489581 CEBPGP53567 150 aa10.24□□□□□ -0.77
TOP3B-217ENST00000489581 SMAGPQ0VAQ4 97 aa10.24□□□□□ -0.77
TOP3B-217ENST00000489581 TMEM250H0YL14 139 aa10.23□□□□□ -0.77
TOP3B-217ENST00000489581 LORP23490 312 aaPredicted RBP10.23□□□□□ -0.77
TOP3B-217ENST00000489581 PRR4Q16378 134 aa10.23□□□□□ -0.77
TOP3B-217ENST00000489581 SLC51BQ86UW2 128 aa10.23□□□□□ -0.77
TOP3B-217ENST00000489581 TSKUQ8WUA8 353 aa10.23□□□□□ -0.77
TOP3B-217ENST00000489581 IGLV1-50A0A075B6I6 118 aa10.22□□□□□ -0.77
TOP3B-217ENST00000489581 SUMO2P61956 95 aaKnown RBP10.22□□□□□ -0.77
TOP3B-217ENST00000489581 FAM19A5Q7Z5A7 132 aaPredicted RBP10.22□□□□□ -0.77
TOP3B-217ENST00000489581 NRACQ8N912 160 aa10.22□□□□□ -0.77
TOP3B-217ENST00000489581 OR10D4PQ8NGN7 298 aa10.22□□□□□ -0.77
TOP3B-217ENST00000489581 ORAOV1Q8WV07 137 aa10.22□□□□□ -0.77
TOP3B-217ENST00000489581 IMMP2LQ96T52 175 aa10.22□□□□□ -0.77
TOP3B-217ENST00000489581 KIR2DL4Q99706 377 aa10.22□□□□□ -0.77
TOP3B-217ENST00000489581 MRPL35Q9NZE8 188 aaKnown RBP10.22□□□□□ -0.77
TOP3B-217ENST00000489581 MUC2Q02817 5179 aa10.21□□□□□ -0.77
TOP3B-217ENST00000489581 KRTAP1-4P0C5Y4 121 aa10.21□□□□□ -0.77
TOP3B-217ENST00000489581 C10orf25Q5T742 122 aa10.21□□□□□ -0.77
TOP3B-217ENST00000489581 NDUFA1O15239 70 aa10.2□□□□□ -0.78
TOP3B-217ENST00000489581 GAGE2EQ4V326 116 aa10.2□□□□□ -0.78
TOP3B-217ENST00000489581 UNQ6190/PRO20217Q6UXQ8 127 aa10.2□□□□□ -0.78
TOP3B-217ENST00000489581 TMEM18Q96B42 140 aa10.2□□□□□ -0.78
TOP3B-217ENST00000489581 TIMM21Q9BVV7 248 aa10.2□□□□□ -0.78
TOP3B-217ENST00000489581 GAGE2DQ9UEU5 116 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms