RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TIRAPP58753 221 aa9.78□□□□□ -0.84
CLDN11-209ENST00000489485 BATFQ16520 125 aa9.78□□□□□ -0.84
CLDN11-209ENST00000489485 LELP1Q5T871 98 aa9.78□□□□□ -0.84
CLDN11-209ENST00000489485 HSPB8Q9UJY1 196 aa9.78□□□□□ -0.84
CLDN11-209ENST00000489485 TRAV8-6A0A0B4J262 113 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 LINC01546A6NGU7 62 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 K7EMI3 77 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 DLEU1O43261 78 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 LEPROTL1O95214 131 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 G0S2P27469 103 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 ORMDL2Q53FV1 153 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 TMEM97Q5BJF2 176 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 LINC00476Q8WZB0 136 aa9.77□□□□□ -0.85
CLDN11-209ENST00000489485 TRBV25-1A0A075B6N4 114 aa9.76□□□□□ -0.85
CLDN11-209ENST00000489485 IGHV1-24A0A0C4DH33 117 aa9.76□□□□□ -0.85
CLDN11-209ENST00000489485 CHCHD7Q9BUK0 85 aa9.76□□□□□ -0.85
CLDN11-209ENST00000489485 MAP1LC3CQ9BXW4 147 aa9.76□□□□□ -0.85
CLDN11-209ENST00000489485 PET117Q6UWS5 81 aa9.76□□□□□ -0.85
CLDN11-209ENST00000489485 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
CLDN11-209ENST00000489485 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.75□□□□□ -0.85
CLDN11-209ENST00000489485 IGKV2-29A2NJV5 120 aaPredicted RBP9.75□□□□□ -0.85
CLDN11-209ENST00000489485 SYS1-DBNDD2H3BUS1 97 aa9.75□□□□□ -0.85
CLDN11-209ENST00000489485 RPL39P62891 51 aaKnown RBP9.75□□□□□ -0.85
CLDN11-209ENST00000489485 CHCHD5Q9BSY4 110 aa9.75□□□□□ -0.85
CLDN11-209ENST00000489485 UPK3BQ9BT76 320 aa9.75□□□□□ -0.85
CLDN11-209ENST00000489485 C20orf203Q8NBC4 194 aa9.74□□□□□ -0.85
CLDN11-209ENST00000489485 TMEM243Q9BU79 118 aa9.74□□□□□ -0.85
CLDN11-209ENST00000489485 Q9H8V8 135 aa9.74□□□□□ -0.85
CLDN11-209ENST00000489485 A0A096LNJ9 63 aa9.74□□□□□ -0.85
CLDN11-209ENST00000489485 SIVA1O15304 175 aa9.74□□□□□ -0.85
CLDN11-209ENST00000489485 C2orf66Q6UXQ4 117 aa9.74□□□□□ -0.85
CLDN11-209ENST00000489485 ATOH7Q8N100 152 aa9.74□□□□□ -0.85
CLDN11-209ENST00000489485 TMEM262E9PQX1 116 aa9.73□□□□□ -0.85
CLDN11-209ENST00000489485 UBE2L6O14933 153 aa9.73□□□□□ -0.85
CLDN11-209ENST00000489485 HBDP02042 147 aa9.72□□□□□ -0.85
CLDN11-209ENST00000489485 GAGE6Q13070 117 aa9.72□□□□□ -0.85
CLDN11-209ENST00000489485 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
CLDN11-209ENST00000489485 A0A087WX48 190 aa9.71□□□□□ -0.85
CLDN11-209ENST00000489485 ORAOV1Q8WV07 137 aa9.71□□□□□ -0.85
CLDN11-209ENST00000489485 TOMM6Q96B49 74 aa9.71□□□□□ -0.85
CLDN11-209ENST00000489485 DNAH1Q9P2D7 4330 aa9.71□□□□□ -0.86
CLDN11-209ENST00000489485 LCE6AA0A183 80 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 IGHV3-30P01768 117 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 IGHV3-33P01772 117 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 IGHV3-30-3P0DP02 117 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 IGHV3-30-5P0DP03 117 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 FGF6P10767 208 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 SPATA12Q7Z6I5 190 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 Q8N3U1 123 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 PMCHL2Q9BQD1 86 aa9.7□□□□□ -0.86
CLDN11-209ENST00000489485 AMMECR1LQ6DCA0 310 aa9.69□□□□□ -0.86
CLDN11-209ENST00000489485 SLC25A34Q6PIV7 304 aa9.69□□□□□ -0.86
CLDN11-209ENST00000489485 STPG4Q8N801 248 aa9.69□□□□□ -0.86
CLDN11-209ENST00000489485 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
CLDN11-209ENST00000489485 H7C423 109 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 DNAH10OSP0CZ25 163 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 MPV17L2Q567V2 206 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 LINC01545Q5VT33 79 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 OPRPNQ99935 248 aaPredicted RBP9.68□□□□□ -0.86
CLDN11-209ENST00000489485 VPS13DQ5THJ4 4388 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 M0R2N4 97 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 HINT1P49773 126 aaPredicted RBP9.68□□□□□ -0.86
CLDN11-209ENST00000489485 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 DGAT2L7PQ6IED9 249 aa9.68□□□□□ -0.86
CLDN11-209ENST00000489485 IGIPA6NJ69 53 aa9.67□□□□□ -0.86
CLDN11-209ENST00000489485 LINC00173Q6ZV60 143 aa9.67□□□□□ -0.86
CLDN11-209ENST00000489485 ERASQ7Z444 233 aa9.67□□□□□ -0.86
CLDN11-209ENST00000489485 IGLV4-60A0A075B6I1 120 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 NPSP0C0P6 89 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 RBX1P62877 108 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 ALMS1Q8TCU4 4167 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 NBDYA0A0U1RRE5 68 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
CLDN11-209ENST00000489485 TMEM101Q96IK0 257 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 SPANXA1Q9NS26 97 aa9.66□□□□□ -0.86
CLDN11-209ENST00000489485 A0A1B0GUV1 79 aa9.65□□□□□ -0.86
CLDN11-209ENST00000489485 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.65□□□□□ -0.86
CLDN11-209ENST00000489485 ANGP03950 147 aaKnown RBP9.65□□□□□ -0.86
CLDN11-209ENST00000489485 OR5A1Q8NGJ0 315 aa9.65□□□□□ -0.86
CLDN11-209ENST00000489485 FAM104AQ969W3 186 aa9.65□□□□□ -0.86
CLDN11-209ENST00000489485 TIMM17AQ99595 171 aa9.65□□□□□ -0.86
CLDN11-209ENST00000489485 KLK12Q9UKR0 248 aa9.65□□□□□ -0.86
CLDN11-209ENST00000489485 PYGO1Q9Y3Y4 419 aa9.65□□□□□ -0.86
CLDN11-209ENST00000489485 COX11Q9Y6N1 276 aa9.65□□□□□ -0.86
CLDN11-209ENST00000489485 KMT2CQ8NEZ4 4911 aaKnown RBP9.65□□□□□ -0.87
CLDN11-209ENST00000489485 KMT2AQ03164 3969 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 hDV102S1A0JD36 115 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 SMAGPQ0VAQ4 97 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 TTC32Q5I0X7 151 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 C10orf126Q8N4M7 172 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 TIMM21Q9BVV7 248 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 CSDC2Q9Y534 153 aaKnown RBP9.64□□□□□ -0.87
CLDN11-209ENST00000489485 IGLV4-3A0A075B6K6 122 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 ATP5LO75964 103 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 Q6ZUT4 128 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 IFI27L1Q96BM0 104 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 TMEM141Q96I45 108 aa9.64□□□□□ -0.87
CLDN11-209ENST00000489485 KRTAP1-5Q9BYS1 174 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms