RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PRSS1P07477 247 aa9.32□□□□□ -0.92
BRCA1-218ENST00000489037 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
BRCA1-218ENST00000489037 SS18Q15532 418 aa9.32□□□□□ -0.92
BRCA1-218ENST00000489037 LINC01620Q4KN68 170 aa9.32□□□□□ -0.92
BRCA1-218ENST00000489037 TMEM136Q6ZRR5 245 aa9.32□□□□□ -0.92
BRCA1-218ENST00000489037 COMMD7Q86VX2 200 aa9.32□□□□□ -0.92
BRCA1-218ENST00000489037 CHCHD10Q8WYQ3 142 aaPredicted RBP9.32□□□□□ -0.92
BRCA1-218ENST00000489037 FAM229AH3BQW9 127 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 ZNF664Q8N3J9 261 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 IMMP2LQ96T52 175 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 SEC11CQ9BY50 192 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 CTDSP1Q9GZU7 261 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 CDC42SE2Q9NRR3 84 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 FAM30AQ9NZY2 134 aa9.31□□□□□ -0.92
BRCA1-218ENST00000489037 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.3□□□□□ -0.92
BRCA1-218ENST00000489037 NPYP01303 97 aa9.3□□□□□ -0.92
BRCA1-218ENST00000489037 RAB5AP20339 215 aa9.3□□□□□ -0.92
BRCA1-218ENST00000489037 HAMPP81172 84 aa9.3□□□□□ -0.92
BRCA1-218ENST00000489037 KRTAP4-5Q9BYR2 181 aa9.3□□□□□ -0.92
BRCA1-218ENST00000489037 LINC00959A0A1B0GUT2 108 aa9.29□□□□□ -0.92
BRCA1-218ENST00000489037 SMR3BP02814 79 aaPredicted RBP9.29□□□□□ -0.92
BRCA1-218ENST00000489037 Q6ZSA8 131 aa9.29□□□□□ -0.92
BRCA1-218ENST00000489037 LAMTOR2Q9Y2Q5 125 aa9.29□□□□□ -0.92
BRCA1-218ENST00000489037 CSDC2Q9Y534 153 aaKnown RBP9.29□□□□□ -0.92
BRCA1-218ENST00000489037 ADCYAP1P18509 176 aa9.28□□□□□ -0.92
BRCA1-218ENST00000489037 S100PP25815 95 aa9.28□□□□□ -0.92
BRCA1-218ENST00000489037 XCL1P47992 114 aa9.28□□□□□ -0.92
BRCA1-218ENST00000489037 C9orf163Q8N9P6 203 aa9.28□□□□□ -0.92
BRCA1-218ENST00000489037 TIMM21Q9BVV7 248 aa9.28□□□□□ -0.92
BRCA1-218ENST00000489037 UBE2D4Q9Y2X8 147 aa9.28□□□□□ -0.92
BRCA1-218ENST00000489037 PCLOQ9Y6V0 5065 aa9.27□□□□□ -0.92
BRCA1-218ENST00000489037 DNAH8Q96JB1 4490 aa9.27□□□□□ -0.93
BRCA1-218ENST00000489037 CCL25O15444 150 aa9.27□□□□□ -0.93
BRCA1-218ENST00000489037 Q5VSD8 79 aa9.27□□□□□ -0.93
BRCA1-218ENST00000489037 KRTAP17-1Q9BYP8 105 aa9.27□□□□□ -0.93
BRCA1-218ENST00000489037 MAP1LC3AQ9H492 121 aa9.27□□□□□ -0.93
BRCA1-218ENST00000489037 TRAV9-1A0A075B6T8 112 aa9.26□□□□□ -0.93
BRCA1-218ENST00000489037 C1orf196B1AJZ1 125 aa9.26□□□□□ -0.93
BRCA1-218ENST00000489037 CNBPP62633 177 aaKnown RBP9.26□□□□□ -0.93
BRCA1-218ENST00000489037 IGHV3-64A0A075B6Q5 118 aa9.25□□□□□ -0.93
BRCA1-218ENST00000489037 LOC389332A0A1B0GUA5 103 aa9.25□□□□□ -0.93
BRCA1-218ENST00000489037 FOXI1Q12951 378 aa9.25□□□□□ -0.93
BRCA1-218ENST00000489037 CD164L2Q6UWJ8 174 aa9.25□□□□□ -0.93
BRCA1-218ENST00000489037 CHAC1Q9BUX1 264 aa9.25□□□□□ -0.93
BRCA1-218ENST00000489037 ABCA13Q86UQ4 5058 aa9.25□□□□□ -0.93
BRCA1-218ENST00000489037 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
BRCA1-218ENST00000489037 HIGD2BQ4VC39 106 aa9.24□□□□□ -0.93
BRCA1-218ENST00000489037 SCXQ7RTU7 201 aa9.24□□□□□ -0.93
BRCA1-218ENST00000489037 C15orf56Q8N910 161 aa9.24□□□□□ -0.93
BRCA1-218ENST00000489037 SPANXA1Q9NS26 97 aa9.24□□□□□ -0.93
BRCA1-218ENST00000489037 TRAV13-1A0A0B4J241 112 aa9.23□□□□□ -0.93
BRCA1-218ENST00000489037 PRSS47A8MTI9 375 aa9.23□□□□□ -0.93
BRCA1-218ENST00000489037 MALP21145 153 aa9.23□□□□□ -0.93
BRCA1-218ENST00000489037 RPL39P62891 51 aaKnown RBP9.23□□□□□ -0.93
BRCA1-218ENST00000489037 RNASE13Q5GAN3 156 aaKnown RBP9.23□□□□□ -0.93
BRCA1-218ENST00000489037 Q6ZUT4 128 aa9.23□□□□□ -0.93
BRCA1-218ENST00000489037 GVQW2A0A096LPI5 108 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-218ENST00000489037 PLA2G1BP04054 148 aaKnown RBP9.22□□□□□ -0.93
BRCA1-218ENST00000489037 INAFM2P0DMQ5 153 aa9.22□□□□□ -0.93
BRCA1-218ENST00000489037 IFI27P40305 119 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-218ENST00000489037 RHEBQ15382 184 aa9.22□□□□□ -0.93
BRCA1-218ENST00000489037 COX19Q49B96 90 aa9.22□□□□□ -0.93
BRCA1-218ENST00000489037 Q8N8P6 123 aa9.22□□□□□ -0.93
BRCA1-218ENST00000489037 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
BRCA1-218ENST00000489037 ZNF561-AS1K7EIQ3 104 aa9.21□□□□□ -0.94
BRCA1-218ENST00000489037 COX7A2LO14548 114 aa9.21□□□□□ -0.94
BRCA1-218ENST00000489037 MRPS36P82909 103 aaKnown RBP9.21□□□□□ -0.94
BRCA1-218ENST00000489037 C10orf91Q5T1B1 145 aa9.21□□□□□ -0.94
BRCA1-218ENST00000489037 SDIM1Q6ZPB5 146 aa9.21□□□□□ -0.94
BRCA1-218ENST00000489037 LINC00528Q8N1L1 170 aa9.21□□□□□ -0.94
BRCA1-218ENST00000489037 CIRBP-AS1Q8TBR5 109 aa9.21□□□□□ -0.94
BRCA1-218ENST00000489037 RPS10P5Q9NQ39 176 aa9.21□□□□□ -0.94
BRCA1-218ENST00000489037 CARHSP1Q9Y2V2 147 aaKnown RBP9.21□□□□□ -0.94
BRCA1-218ENST00000489037 K7EMI3 77 aa9.2□□□□□ -0.94
BRCA1-218ENST00000489037 G0S2P27469 103 aa9.2□□□□□ -0.94
BRCA1-218ENST00000489037 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
BRCA1-218ENST00000489037 ORMDL2Q53FV1 153 aa9.2□□□□□ -0.94
BRCA1-218ENST00000489037 NXT2Q9NPJ8 142 aaKnown RBP9.2□□□□□ -0.94
BRCA1-218ENST00000489037 PKIGQ9Y2B9 76 aa9.2□□□□□ -0.94
BRCA1-218ENST00000489037 IFITM10A6NMD0 228 aa9.19□□□□□ -0.94
BRCA1-218ENST00000489037 APOMO95445 188 aa9.19□□□□□ -0.94
BRCA1-218ENST00000489037 SLPIP03973 132 aa9.19□□□□□ -0.94
BRCA1-218ENST00000489037 GNB1LQ9BYB4 327 aa9.19□□□□□ -0.94
BRCA1-218ENST00000489037 CYSLTR1Q9Y271 337 aa9.19□□□□□ -0.94
BRCA1-218ENST00000489037 PYGO1Q9Y3Y4 419 aa9.19□□□□□ -0.94
BRCA1-218ENST00000489037 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
BRCA1-218ENST00000489037 FAT1Q14517 4588 aa9.18□□□□□ -0.94
BRCA1-218ENST00000489037 C2orf66Q6UXQ4 117 aa9.17□□□□□ -0.94
BRCA1-218ENST00000489037 Q6ZN92 141 aa9.17□□□□□ -0.94
BRCA1-218ENST00000489037 C5orf38Q86SI9 138 aa9.17□□□□□ -0.94
BRCA1-218ENST00000489037 TMEM141Q96I45 108 aa9.17□□□□□ -0.94
BRCA1-218ENST00000489037 OPRPNQ99935 248 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-218ENST00000489037 APOC3P02656 99 aa9.16□□□□□ -0.94
BRCA1-218ENST00000489037 MT-ND6P03923 174 aa9.16□□□□□ -0.94
BRCA1-218ENST00000489037 TEX43Q6ZNM6 134 aa9.16□□□□□ -0.94
BRCA1-218ENST00000489037 PRSS3P2Q8NHM4 247 aa9.16□□□□□ -0.94
BRCA1-218ENST00000489037 CARD19Q96LW7 228 aa9.16□□□□□ -0.94
BRCA1-218ENST00000489037 C2orf88Q9BSF0 95 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms