RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 PPP3R2Q96LZ3 170 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 AMELXQ99217 191 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 MGST2Q99735 147 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 LINC00472Q9H8W2 130 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 LINC00474Q9P2X8 69 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 LINC01558Q9Y6Z2 57 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 ARL2-SNX15V9GYD0 113 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 C2CD3Q4AC94 2353 aa-0.24□□□□□ -2.45
R3HDM1-219ENST00000488035 FLNAP21333 2647 aaKnown RBP-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 M0R2T5 61 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 IFNGP01579 166 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 IGLC1P0CG04 106 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 TPPP2P59282 170 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 GNG11P61952 73 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 MYOZ3Q8TDC0 251 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 LINC01600Q96MT4 127 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 LINC00470Q9BZP3 86 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 NAA60Q9H7X0 242 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 NXT2Q9NPJ8 142 aaKnown RBP-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 MANBALQ9NQG1 85 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 CRIPTQ9P021 101 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 WDR7Q9Y4E6 1490 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 USF3Q68DE3 2245 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 CHD6Q8TD26 2715 aa-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 SRRM2Q9UQ35 2752 aaKnown RBP-0.25□□□□□ -2.45
R3HDM1-219ENST00000488035 CEP152O94986 1710 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 ARAP2Q8WZ64 1704 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 BCL9LQ86UU0 1499 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 HSPG2P98160 4391 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 LOC100130705A0A1B0GUX0 176 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 CPSF4LA6NMK7 179 aaKnown RBP-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 APOC2P02655 101 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 AKAIN1P0CW23 69 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 SELENOWP63302 87 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 Q56UQ5 140 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 C10orf113Q5VZT2 155 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 C12orf73Q69YU5 71 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 FAM223AQ8IWN6 122 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 TSC22D3Q99576 134 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 SPANXDQ9BXN6 97 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 RERGLQ9H628 205 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 UQCR10Q9UDW1 63 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 SPTBN1Q01082 2364 aaKnown RBP-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 DOPEY2Q9Y3R5 2298 aa-0.26□□□□□ -2.45
R3HDM1-219ENST00000488035 LRRC37A3O60309 1634 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 PLCE1Q9P212 2302 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 LINC00959A0A1B0GUT2 108 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 LOC285095A0A1B0GVY8 99 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 OOSP1A8MZH6 123 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 MGPP08493 103 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 TRAPPC2P0DI81 140 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 TRAPPC2BP0DI82 140 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 KRTAP19-8Q3LI54 63 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 C9orf153Q5TBE3 101 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 SNRNP25Q9BV90 132 aaKnown RBP-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 ZNF236Q9UL36 1845 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 ACANP16112 2415 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 CSPG4Q6UVK1 2322 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 LAMC1P11047 1609 aa-0.27□□□□□ -2.45
R3HDM1-219ENST00000488035 NEBP20929 6669 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 CPSF1Q10570 1443 aaKnown RBP-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 NSD3Q9BZ95 1437 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 PLXNB2O15031 1838 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 PKD1L1Q8TDX9 2849 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 ZANQ9Y493 2812 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 TRBV7-4A0A0J9YYF1 115 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 A0A1B0GWA3 101 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 NDUFA2O43678 99 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 SSSCA1O60232 199 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 COX8AP10176 69 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 SPRR2BP35325 72 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 SNCAP37840 140 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 SEC11AP67812 179 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 COMMD6Q7Z4G1 85 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 C5orf38Q86SI9 138 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 C8orf59Q8N0T1 100 aaPredicted RBP-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 TMEM263Q8WUH6 116 aaKnown RBP-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 TNXBP22105 4242 aa-0.28□□□□□ -2.45
R3HDM1-219ENST00000488035 CFTRP13569 1480 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 SHANK2Q9UPX8 1470 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 GVINP1Q7Z2Y8 2422 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 WNK1Q9H4A3 2382 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 FAM24AA6NFZ4 105 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 FAM223BA6NKX1 122 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 UBE2L3P68036 154 aaKnown RBP-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 DEFB135Q30KP9 77 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 HEPN1Q6WQI6 88 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 DEFB123Q8N688 67 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 USMG5Q96IX5 58 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 PRO1933Q9H354 126 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 PAPPAQ13219 1627 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 HMGXB3Q12766 1538 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 ARHGEF12Q9NZN5 1544 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 GRIN2AQ12879 1464 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 PIEZO2Q9H5I5 2752 aa-0.29□□□□□ -2.46
R3HDM1-219ENST00000488035 ROCK2O75116 1388 aaKnown RBP-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 KMT2AQ03164 3969 aa-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 EP300Q09472 2414 aaPredicted RBP-0.3□□□□□ -2.46
R3HDM1-219ENST00000488035 S100A1P23297 94 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms