RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 A0A1W2PRX2 142 aa11.24□□□□□ -0.61
HLA-DQB1-209ENST00000487676 NBL1P41271 181 aa11.24□□□□□ -0.61
HLA-DQB1-209ENST00000487676 BRK1Q8WUW1 75 aa11.24□□□□□ -0.61
HLA-DQB1-209ENST00000487676 SLPIP03973 132 aa11.23□□□□□ -0.61
HLA-DQB1-209ENST00000487676 XCL1P47992 114 aa11.23□□□□□ -0.61
HLA-DQB1-209ENST00000487676 FBXL19-AS1Q494R0 122 aa11.23□□□□□ -0.61
HLA-DQB1-209ENST00000487676 C11orf44Q8N8P7 122 aa11.23□□□□□ -0.61
HLA-DQB1-209ENST00000487676 IGHV4-38-2P0DP08 117 aa11.23□□□□□ -0.61
HLA-DQB1-209ENST00000487676 LINC00315P59091 139 aa11.23□□□□□ -0.61
HLA-DQB1-209ENST00000487676 PTPN13Q12923 2485 aa11.22□□□□□ -0.61
HLA-DQB1-209ENST00000487676 A0A087WVE0 104 aa11.22□□□□□ -0.61
HLA-DQB1-209ENST00000487676 NOP10Q9NPE3 64 aaKnown RBP11.21□□□□□ -0.61
HLA-DQB1-209ENST00000487676 RPL35AP18077 110 aaKnown RBP11.21□□□□□ -0.61
HLA-DQB1-209ENST00000487676 RPL28P46779 137 aaKnown RBP11.21□□□□□ -0.62
HLA-DQB1-209ENST00000487676 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.62
HLA-DQB1-209ENST00000487676 K7ENP7 123 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DEFB130BP0DP73 79 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DEFB130AP0DP74 79 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 APRG1Q8IVJ8 170 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 SMIM11BQ8TCY0 68 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 IBA57-AS1B1ANH7 110 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 PDE6GP18545 87 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DOPEY1Q5JWR5 2465 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 NDUFC2-KCTD14E9PQ53 114 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DSCR9P59020 149 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DEFB121Q5J5C9 76 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DCANP1Q8TF63 244 aa11.2□□□□□ -0.62
HLA-DQB1-209ENST00000487676 A6NDX4 124 aa11.19□□□□□ -0.62
HLA-DQB1-209ENST00000487676 H3BQ85 93 aa11.19□□□□□ -0.62
HLA-DQB1-209ENST00000487676 LMO4P61968 165 aa11.19□□□□□ -0.62
HLA-DQB1-209ENST00000487676 IGHV4-59P01825 116 aa11.18□□□□□ -0.62
HLA-DQB1-209ENST00000487676 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
HLA-DQB1-209ENST00000487676 C5orf42Q9H799 3197 aa11.18□□□□□ -0.62
HLA-DQB1-209ENST00000487676 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
HLA-DQB1-209ENST00000487676 Q8NA96 180 aa11.18□□□□□ -0.62
HLA-DQB1-209ENST00000487676 LINC00242Q5T6M2 205 aa11.17□□□□□ -0.62
HLA-DQB1-209ENST00000487676 PRRC2CQ9Y520 2896 aaKnown RBP11.17□□□□□ -0.62
HLA-DQB1-209ENST00000487676 CHD7Q9P2D1 2997 aa11.17□□□□□ -0.62
HLA-DQB1-209ENST00000487676 IGHV4-61A0A0C4DH41 118 aa11.16□□□□□ -0.62
HLA-DQB1-209ENST00000487676 SLURP1P55000 103 aa11.16□□□□□ -0.62
HLA-DQB1-209ENST00000487676 SERP1Q9Y6X1 66 aa11.16□□□□□ -0.62
HLA-DQB1-209ENST00000487676 SMIM26A0A096LP01 95 aa11.16□□□□□ -0.62
HLA-DQB1-209ENST00000487676 CHCHD7Q9BUK0 85 aa11.16□□□□□ -0.62
HLA-DQB1-209ENST00000487676 CLPSL2Q6UWE3 100 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 PIEZO2Q9H5I5 2752 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 SMIM1B2RUZ4 78 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 LINC01356Q8N9X3 169 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DPH3Q96FX2 82 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 PRORYQ9H606 182 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 NDUFC1O43677 76 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 DEFB112Q30KQ8 113 aa11.15□□□□□ -0.62
HLA-DQB1-209ENST00000487676 CCKP06307 115 aa11.15□□□□□ -0.63
HLA-DQB1-209ENST00000487676 DEFB136Q30KP8 78 aa11.15□□□□□ -0.63
HLA-DQB1-209ENST00000487676 LINC00846Q9NV44 126 aa11.14□□□□□ -0.63
HLA-DQB1-209ENST00000487676 HTTP42858 3142 aa11.13□□□□□ -0.63
HLA-DQB1-209ENST00000487676 ATP5EP56381 51 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB1-209ENST00000487676 OTOGLQ3ZCN5 2332 aa11.13□□□□□ -0.63
HLA-DQB1-209ENST00000487676 HTN3P15516 51 aa11.13□□□□□ -0.63
HLA-DQB1-209ENST00000487676 WFDC11Q8NEX6 87 aa11.12□□□□□ -0.63
HLA-DQB1-209ENST00000487676 WFDC9Q8NEX5 89 aa11.12□□□□□ -0.63
HLA-DQB1-209ENST00000487676 V9GYY9 64 aa11.12□□□□□ -0.63
HLA-DQB1-209ENST00000487676 TLN1Q9Y490 2541 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 RNF223E7ERA6 249 aa11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 CCL18P55774 89 aa11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 TRAV7A0A075B6U4 112 aa11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 ADORA2A-AS1P86434 159 aa11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 COX6A2Q02221 97 aa11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 C11orf71Q6IPW1 123 aa11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 FAM19A4Q96LR4 140 aa11.11□□□□□ -0.63
HLA-DQB1-209ENST00000487676 A0A087WYN8 130 aa11.1□□□□□ -0.63
HLA-DQB1-209ENST00000487676 A0A0U1RQV1 116 aa11.1□□□□□ -0.63
HLA-DQB1-209ENST00000487676 ANGP03950 147 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB1-209ENST00000487676 SNURFQ9Y675 71 aa11.1□□□□□ -0.63
HLA-DQB1-209ENST00000487676 LITAFQ99732 161 aa11.1□□□□□ -0.63
HLA-DQB1-209ENST00000487676 C16orf74Q96GX8 76 aa11.1□□□□□ -0.63
HLA-DQB1-209ENST00000487676 KIR2DL5BQ8NHK3 375 aa11.09□□□□□ -0.63
HLA-DQB1-209ENST00000487676 NREPQ16612 68 aa11.09□□□□□ -0.63
HLA-DQB1-209ENST00000487676 Q6ZTI0 123 aa11.09□□□□□ -0.63
HLA-DQB1-209ENST00000487676 MAP6D1Q9H9H5 199 aa11.09□□□□□ -0.63
HLA-DQB1-209ENST00000487676 PRB1P04280 392 aa11.08□□□□□ -0.63
HLA-DQB1-209ENST00000487676 Q8N2B8 174 aa11.08□□□□□ -0.63
HLA-DQB1-209ENST00000487676 MPLKIPQ8TAP9 179 aa11.08□□□□□ -0.64
HLA-DQB1-209ENST00000487676 CDC42SE2Q9NRR3 84 aa11.08□□□□□ -0.64
HLA-DQB1-209ENST00000487676 DAD1P61803 113 aa11.07□□□□□ -0.64
HLA-DQB1-209ENST00000487676 J3QLI3 93 aa11.07□□□□□ -0.64
HLA-DQB1-209ENST00000487676 IGLV1-40P01703 118 aa11.07□□□□□ -0.64
HLA-DQB1-209ENST00000487676 C4orf26Q17RF5 130 aa11.06□□□□□ -0.64
HLA-DQB1-209ENST00000487676 SMCR5Q8TEV8 140 aa11.06□□□□□ -0.64
HLA-DQB1-209ENST00000487676 IGLV5-39A0A0G2JS06 123 aa11.06□□□□□ -0.64
HLA-DQB1-209ENST00000487676 F8WEM9 126 aa11.06□□□□□ -0.64
HLA-DQB1-209ENST00000487676 PCSK5Q92824 1860 aa11.06□□□□□ -0.64
HLA-DQB1-209ENST00000487676 PRM2P04554 102 aa11.05□□□□□ -0.64
HLA-DQB1-209ENST00000487676 C6orf99Q4VX62 202 aa11.05□□□□□ -0.64
HLA-DQB1-209ENST00000487676 PRO0628Q9UI54 55 aa11.05□□□□□ -0.64
HLA-DQB1-209ENST00000487676 CCDC168Q8NDH2 2452 aa11.05□□□□□ -0.64
HLA-DQB1-209ENST00000487676 A0A096LPF7 62 aa11.05□□□□□ -0.64
HLA-DQB1-209ENST00000487676 LINC01600Q96MT4 127 aa11.04□□□□□ -0.64
HLA-DQB1-209ENST00000487676 ZNF561-AS1K7EIQ3 104 aa11.04□□□□□ -0.64
HLA-DQB1-209ENST00000487676 GYPEP15421 78 aa11.04□□□□□ -0.64
HLA-DQB1-209ENST00000487676 EDN2P20800 178 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms