RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 NTM-AS1Q6ZSK4 140 aa10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 OPRPNQ99935 248 aaPredicted RBP10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 MRPS16Q9Y3D3 137 aaKnown RBP10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 IGLV4-69A0A075B6H9 119 aa10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 AMELXQ99217 191 aa10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 CELA1Q9UNI1 258 aa10.23□□□□□ -0.77
POLR2J3-204ENST00000486319 DNAH7Q8WXX0 4024 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 TRBV25-1A0A075B6N4 114 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 A0A0J9YWU9 116 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 H7C423 109 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 DLEU1O43261 78 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 NMUP48645 174 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 CTAG1AP78358 180 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 MRPS36P82909 103 aaKnown RBP10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 DGAT2L7PQ6IED9 249 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 BOD1L2Q8IYS8 172 aa10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 CSDC2Q9Y534 153 aaKnown RBP10.22□□□□□ -0.77
POLR2J3-204ENST00000486319 M0R143 59 aa10.21□□□□□ -0.78
POLR2J3-204ENST00000486319 PAX4O43316 350 aa10.21□□□□□ -0.78
POLR2J3-204ENST00000486319 GYPEP15421 78 aa10.21□□□□□ -0.78
POLR2J3-204ENST00000486319 CEMP1Q6PRD7 247 aaPredicted RBP10.21□□□□□ -0.78
POLR2J3-204ENST00000486319 NFE4Q86UQ8 179 aa10.21□□□□□ -0.78
POLR2J3-204ENST00000486319 TMEM243Q9BU79 118 aa10.21□□□□□ -0.78
POLR2J3-204ENST00000486319 C11orf86A6NJI1 115 aa10.2□□□□□ -0.78
POLR2J3-204ENST00000486319 UBE2L6O14933 153 aa10.2□□□□□ -0.78
POLR2J3-204ENST00000486319 TCTAP57738 103 aa10.2□□□□□ -0.78
POLR2J3-204ENST00000486319 FAM104AQ969W3 186 aa10.2□□□□□ -0.78
POLR2J3-204ENST00000486319 C2orf88Q9BSF0 95 aa10.2□□□□□ -0.78
POLR2J3-204ENST00000486319 KMT2CQ8NEZ4 4911 aaKnown RBP10.2□□□□□ -0.78
POLR2J3-204ENST00000486319 FGF6P10767 208 aa10.19□□□□□ -0.78
POLR2J3-204ENST00000486319 HERVK_113P61574 105 aa10.19□□□□□ -0.78
POLR2J3-204ENST00000486319 LBHQ53QV2 105 aaPredicted RBP10.19□□□□□ -0.78
POLR2J3-204ENST00000486319 ATP6V0E2Q8NHE4 81 aa10.19□□□□□ -0.78
POLR2J3-204ENST00000486319 C11orf68Q9H3H3 251 aaKnown RBP10.19□□□□□ -0.78
POLR2J3-204ENST00000486319 IGKV2D-26A0A0A0MRZ7 120 aa10.18□□□□□ -0.78
POLR2J3-204ENST00000486319 TRBV6-8A0A0A6YYG3 113 aa10.18□□□□□ -0.78
POLR2J3-204ENST00000486319 E9PLD3 99 aa10.18□□□□□ -0.78
POLR2J3-204ENST00000486319 CHAC1Q9BUX1 264 aa10.18□□□□□ -0.78
POLR2J3-204ENST00000486319 F5H768 121 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 SIVA1O15304 175 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 AMMECR1LQ6DCA0 310 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 Q6ZUT4 128 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 PCP2Q8IVA1 136 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 ZNF25P17030 456 aaPredicted RBP10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 TMEM170BQ5T4T1 132 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 OR5A1Q8NGJ0 315 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 TMEM101Q96IK0 257 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 SNHG12Q9BXW3 62 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 TP73-AS1Q9UF72 201 aa10.17□□□□□ -0.78
POLR2J3-204ENST00000486319 A0A0J9YXV3 536 aa10.16□□□□□ -0.78
POLR2J3-204ENST00000486319 VSIG2Q96IQ7 327 aa10.16□□□□□ -0.78
POLR2J3-204ENST00000486319 CSMD3Q7Z407 3707 aa10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 TRAV26-1A0A087WT03 109 aa10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 A0A0J9YY99 117 aa10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 TINCRA0A1B0GVN0 87 aa10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 EREGO14944 169 aa10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 RNASE13Q5GAN3 156 aaKnown RBP10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 C2orf91Q6ZV80 131 aa10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 CDC42SE2Q9NRR3 84 aa10.15□□□□□ -0.78
POLR2J3-204ENST00000486319 TRAV8-6A0A0B4J262 113 aa10.14□□□□□ -0.79
POLR2J3-204ENST00000486319 HTN3P15516 51 aa10.14□□□□□ -0.79
POLR2J3-204ENST00000486319 ZNF22P17026 224 aaPredicted RBP10.14□□□□□ -0.79
POLR2J3-204ENST00000486319 C12orf74Q32Q52 190 aa10.14□□□□□ -0.79
POLR2J3-204ENST00000486319 SH2D6Q7Z4S9 175 aa10.14□□□□□ -0.79
POLR2J3-204ENST00000486319 CHCHD5Q9BSY4 110 aa10.14□□□□□ -0.79
POLR2J3-204ENST00000486319 STARD9Q9P2P6 4700 aa10.14□□□□□ -0.79
POLR2J3-204ENST00000486319 UBE2D1P51668 147 aa10.13□□□□□ -0.79
POLR2J3-204ENST00000486319 MRPL23Q16540 153 aaKnown RBP10.13□□□□□ -0.79
POLR2J3-204ENST00000486319 TMEM223A0PJW6 202 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 SEC11AP67812 179 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 FAM19A3Q7Z5A8 133 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 C11orf45Q8TAV5 145 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 HIGD1BQ9P298 99 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 TIRAPP58753 221 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 GAGE6Q13070 117 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 TTTY13Q9BZ97 58 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 GEMIN7Q9H840 131 aaKnown RBP10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 ICOSQ9Y6W8 199 aa10.12□□□□□ -0.79
POLR2J3-204ENST00000486319 MYMXA0A1B0GTQ4 84 aa10.11□□□□□ -0.79
POLR2J3-204ENST00000486319 HINT1P49773 126 aaPredicted RBP10.11□□□□□ -0.79
POLR2J3-204ENST00000486319 BATFQ16520 125 aa10.11□□□□□ -0.79
POLR2J3-204ENST00000486319 MAPKAPK5-AS1Q8N8E1 139 aa10.11□□□□□ -0.79
POLR2J3-204ENST00000486319 A0A096LPF7 62 aa10.1□□□□□ -0.79
POLR2J3-204ENST00000486319 NUPR2A6NF83 97 aa10.1□□□□□ -0.79
POLR2J3-204ENST00000486319 H3BNG1 76 aa10.1□□□□□ -0.79
POLR2J3-204ENST00000486319 LEPROTO15243 131 aa10.1□□□□□ -0.79
POLR2J3-204ENST00000486319 HERVK_113P63121 156 aa10.1□□□□□ -0.79
POLR2J3-204ENST00000486319 MPV17L2Q567V2 206 aa10.1□□□□□ -0.79
POLR2J3-204ENST00000486319 NANOS2P60321 138 aaKnown RBP10.09□□□□□ -0.79
POLR2J3-204ENST00000486319 PLEKHB2Q96CS7 222 aa10.09□□□□□ -0.79
POLR2J3-204ENST00000486319 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
POLR2J3-204ENST00000486319 A0A1B0GUV1 79 aa10.08□□□□□ -0.8
POLR2J3-204ENST00000486319 H3BRM9 83 aa10.08□□□□□ -0.8
POLR2J3-204ENST00000486319 HSD52Q0P140 79 aa10.08□□□□□ -0.8
POLR2J3-204ENST00000486319 LINC00469Q8N7U9 141 aa10.08□□□□□ -0.8
POLR2J3-204ENST00000486319 TENM2Q9NT68 2774 aa10.08□□□□□ -0.8
POLR2J3-204ENST00000486319 LCE6AA0A183 80 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 ZNF815PA8K554 130 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 J3QQQ9 107 aa10.07□□□□□ -0.8
POLR2J3-204ENST00000486319 LGALS3P17931 250 aaKnown RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms