RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.82□□□□□ -0.52
PRPF40A-209ENST00000486100 TMEM218A2RU14 115 aa11.81□□□□□ -0.52
PRPF40A-209ENST00000486100 SMKR1H3BMG3 65 aa11.81□□□□□ -0.52
PRPF40A-209ENST00000486100 KRTAP10-4P60372 401 aaPredicted RBP11.81□□□□□ -0.52
PRPF40A-209ENST00000486100 C15orf56Q8N910 161 aa11.81□□□□□ -0.52
PRPF40A-209ENST00000486100 SEC11CQ9BY50 192 aa11.81□□□□□ -0.52
PRPF40A-209ENST00000486100 IGHV3-64A0A075B6Q5 118 aa11.8□□□□□ -0.52
PRPF40A-209ENST00000486100 PANO1I0J062 215 aa11.8□□□□□ -0.52
PRPF40A-209ENST00000486100 FAM104BQ5XKR9 115 aa11.8□□□□□ -0.52
PRPF40A-209ENST00000486100 MRPL52Q86TS9 123 aaKnown RBP11.8□□□□□ -0.52
PRPF40A-209ENST00000486100 NRACQ8N912 160 aa11.8□□□□□ -0.52
PRPF40A-209ENST00000486100 A0A1B0GW15 77 aa11.79□□□□□ -0.52
PRPF40A-209ENST00000486100 C7orf77A4D0Y5 90 aa11.79□□□□□ -0.52
PRPF40A-209ENST00000486100 SUMO2P61956 95 aaKnown RBP11.79□□□□□ -0.52
PRPF40A-209ENST00000486100 PNRC1Q12796 327 aaPredicted RBP11.79□□□□□ -0.52
PRPF40A-209ENST00000486100 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
PRPF40A-209ENST00000486100 DMBT1Q9UGM3 2413 aaPredicted RBP11.78□□□□□ -0.52
PRPF40A-209ENST00000486100 LINC00959A0A1B0GUT2 108 aa11.78□□□□□ -0.52
PRPF40A-209ENST00000486100 CAMPP49913 170 aa11.78□□□□□ -0.52
PRPF40A-209ENST00000486100 FOXI1Q12951 378 aa11.78□□□□□ -0.52
PRPF40A-209ENST00000486100 CIRBPQ14011 172 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-209ENST00000486100 MRPL51Q4U2R6 128 aaKnown RBP11.78□□□□□ -0.52
PRPF40A-209ENST00000486100 PPP1R2P9O14990 202 aa11.77□□□□□ -0.53
PRPF40A-209ENST00000486100 FCER1GP30273 86 aa11.77□□□□□ -0.53
PRPF40A-209ENST00000486100 KIR2DL4Q99706 377 aa11.77□□□□□ -0.53
PRPF40A-209ENST00000486100 F8W036 122 aa11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 J3QL48 77 aa11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 CCL25O15444 150 aa11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 XCL1P47992 114 aa11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 HIGD2BQ4VC39 106 aa11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 C10orf91Q5T1B1 145 aa11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 ZNF664Q8N3J9 261 aa11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 CARHSP1Q9Y2V2 147 aaKnown RBP11.76□□□□□ -0.53
PRPF40A-209ENST00000486100 GVQW2A0A096LPI5 108 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-209ENST00000486100 KRTAP29-1A8MX34 341 aaPredicted RBP11.75□□□□□ -0.53
PRPF40A-209ENST00000486100 SS18Q15532 418 aa11.75□□□□□ -0.53
PRPF40A-209ENST00000486100 DPH3Q96FX2 82 aa11.75□□□□□ -0.53
PRPF40A-209ENST00000486100 C20orf78Q9BR46 151 aa11.75□□□□□ -0.53
PRPF40A-209ENST00000486100 CSDC2Q9Y534 153 aaKnown RBP11.75□□□□□ -0.53
PRPF40A-209ENST00000486100 TRBV24-1A0A075B6N3 115 aa11.74□□□□□ -0.53
PRPF40A-209ENST00000486100 S100A8P05109 93 aa11.74□□□□□ -0.53
PRPF40A-209ENST00000486100 CKS2P33552 79 aa11.74□□□□□ -0.53
PRPF40A-209ENST00000486100 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
PRPF40A-209ENST00000486100 SMAGPQ0VAQ4 97 aa11.74□□□□□ -0.53
PRPF40A-209ENST00000486100 SLC7A5P1Q8MH63 180 aa11.74□□□□□ -0.53
PRPF40A-209ENST00000486100 RPL32P62910 135 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-209ENST00000486100 HBBP68871 147 aa11.73□□□□□ -0.53
PRPF40A-209ENST00000486100 MRPL54Q6P161 138 aaKnown RBP11.73□□□□□ -0.53
PRPF40A-209ENST00000486100 CD164L2Q6UWJ8 174 aa11.73□□□□□ -0.53
PRPF40A-209ENST00000486100 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
PRPF40A-209ENST00000486100 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
PRPF40A-209ENST00000486100 UBE2D4Q9Y2X8 147 aa11.72□□□□□ -0.53
PRPF40A-209ENST00000486100 A0A087WYN8 130 aa11.71□□□□□ -0.53
PRPF40A-209ENST00000486100 TNFRSF6BO95407 300 aa11.71□□□□□ -0.53
PRPF40A-209ENST00000486100 CHTF8P0CG12 524 aa11.71□□□□□ -0.53
PRPF40A-209ENST00000486100 ADCYAP1P18509 176 aa11.71□□□□□ -0.53
PRPF40A-209ENST00000486100 COX6A2Q02221 97 aa11.71□□□□□ -0.53
PRPF40A-209ENST00000486100 SPACA4Q8TDM5 124 aa11.71□□□□□ -0.53
PRPF40A-209ENST00000486100 TMEM18Q96B42 140 aa11.71□□□□□ -0.53
PRPF40A-209ENST00000486100 C1orf196B1AJZ1 125 aa11.7□□□□□ -0.54
PRPF40A-209ENST00000486100 TCAPO15273 167 aa11.7□□□□□ -0.54
PRPF40A-209ENST00000486100 SVBPQ8N300 66 aa11.7□□□□□ -0.54
PRPF40A-209ENST00000486100 D6R8Y8 96 aa11.69□□□□□ -0.54
PRPF40A-209ENST00000486100 PRSS3P2Q8NHM4 247 aa11.69□□□□□ -0.54
PRPF40A-209ENST00000486100 TIMM21Q9BVV7 248 aa11.69□□□□□ -0.54
PRPF40A-209ENST00000486100 PHOX2AO14813 284 aa11.68□□□□□ -0.54
PRPF40A-209ENST00000486100 PPBPP02775 128 aa11.68□□□□□ -0.54
PRPF40A-209ENST00000486100 ATP5L2Q7Z4Y8 100 aa11.68□□□□□ -0.54
PRPF40A-209ENST00000486100 PLAC8Q9NZF1 115 aa11.68□□□□□ -0.54
PRPF40A-209ENST00000486100 SNAPINO95295 136 aa11.67□□□□□ -0.54
PRPF40A-209ENST00000486100 OXTP01178 125 aa11.67□□□□□ -0.54
PRPF40A-209ENST00000486100 MT-ND4LP03901 98 aa11.67□□□□□ -0.54
PRPF40A-209ENST00000486100 RHEBQ15382 184 aa11.67□□□□□ -0.54
PRPF40A-209ENST00000486100 ANAPC16Q96DE5 110 aa11.67□□□□□ -0.54
PRPF40A-209ENST00000486100 SMIM2Q9BVW6 85 aa11.67□□□□□ -0.54
PRPF40A-209ENST00000486100 ZNF561-AS1K7EIQ3 104 aa11.66□□□□□ -0.54
PRPF40A-209ENST00000486100 NPYP01303 97 aa11.66□□□□□ -0.54
PRPF40A-209ENST00000486100 APOC3P02656 99 aa11.66□□□□□ -0.54
PRPF40A-209ENST00000486100 S100A1P23297 94 aa11.66□□□□□ -0.54
PRPF40A-209ENST00000486100 RNASE13Q5GAN3 156 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-209ENST00000486100 LINC00526Q96FQ7 95 aa11.66□□□□□ -0.54
PRPF40A-209ENST00000486100 LRP1Q07954 4544 aaKnown RBP11.66□□□□□ -0.54
PRPF40A-209ENST00000486100 TRAV13-1A0A0B4J241 112 aa11.65□□□□□ -0.54
PRPF40A-209ENST00000486100 MAJINQ3KP22 176 aa11.65□□□□□ -0.54
PRPF40A-209ENST00000486100 CTDSP1Q9GZU7 261 aa11.65□□□□□ -0.54
PRPF40A-209ENST00000486100 IGKV2-24A0A0C4DH68 120 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 COX7A2LO14548 114 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 MALP21145 153 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 HNRNPA3P51991 378 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 RPL39P62891 51 aaKnown RBP11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 TMEM136Q6ZRR5 245 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 Q6ZUT4 128 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 ORMDL3Q8N138 153 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 PKIGQ9Y2B9 76 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 FAT3Q8TDW7 4589 aa11.64□□□□□ -0.55
PRPF40A-209ENST00000486100 SYCNQ0VAF6 134 aa11.63□□□□□ -0.55
PRPF40A-209ENST00000486100 CARD19Q96LW7 228 aa11.63□□□□□ -0.55
PRPF40A-209ENST00000486100 A0A096LNI7 61 aa11.62□□□□□ -0.55
PRPF40A-209ENST00000486100 FAM104AQ969W3 186 aa11.62□□□□□ -0.55
PRPF40A-209ENST00000486100 PRELID3AQ96N28 172 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms