RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 PRSS3P2Q8NHM4 247 aa8.63□□□□□ -1.03
SMARCD3-211ENST00000485592 NAT8BQ9UHF3 227 aa8.63□□□□□ -1.03
SMARCD3-211ENST00000485592 LRP2P98164 4655 aa8.63□□□□□ -1.03
SMARCD3-211ENST00000485592 TMEM218A2RU14 115 aa8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 LINC00862A6NCI5 91 aa8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 PNRC1Q12796 327 aaPredicted RBP8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 REG3GQ6UW15 175 aa8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 COMMD7Q86VX2 200 aa8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 RPL39LQ96EH5 51 aaKnown RBP8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 TMEM191AQ9H0A3 160 aa8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 PKIGQ9Y2B9 76 aa8.62□□□□□ -1.03
SMARCD3-211ENST00000485592 A0A0J9YXV3 536 aa8.61□□□□□ -1.03
SMARCD3-211ENST00000485592 A0A1B0GXF2 115 aa8.61□□□□□ -1.03
SMARCD3-211ENST00000485592 AMMECR1LQ6DCA0 310 aa8.61□□□□□ -1.03
SMARCD3-211ENST00000485592 SPINK6Q6UWN8 80 aa8.61□□□□□ -1.03
SMARCD3-211ENST00000485592 AMN1Q8IY45 258 aa8.61□□□□□ -1.03
SMARCD3-211ENST00000485592 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
SMARCD3-211ENST00000485592 CHCHD10Q8WYQ3 142 aaPredicted RBP8.6□□□□□ -1.03
SMARCD3-211ENST00000485592 LINC00474Q9P2X8 69 aa8.6□□□□□ -1.03
SMARCD3-211ENST00000485592 RNF213Q63HN8 5207 aa8.6□□□□□ -1.03
SMARCD3-211ENST00000485592 A0A096LNI7 61 aa8.59□□□□□ -1.03
SMARCD3-211ENST00000485592 GVQW2A0A096LPI5 108 aaPredicted RBP8.59□□□□□ -1.03
SMARCD3-211ENST00000485592 RAB4AP20338 218 aa8.59□□□□□ -1.03
SMARCD3-211ENST00000485592 RIGQ13278 110 aa8.59□□□□□ -1.03
SMARCD3-211ENST00000485592 ODF1Q14990 250 aa8.59□□□□□ -1.03
SMARCD3-211ENST00000485592 SMIM15Q7Z3B0 74 aa8.59□□□□□ -1.03
SMARCD3-211ENST00000485592 MRPL54Q6P161 138 aaKnown RBP8.58□□□□□ -1.04
SMARCD3-211ENST00000485592 RNASEKQ6P5S7 137 aaKnown RBP8.58□□□□□ -1.04
SMARCD3-211ENST00000485592 SEC11CQ9BY50 192 aa8.58□□□□□ -1.04
SMARCD3-211ENST00000485592 TRBV6-5A0A0K0K1A5 114 aa8.57□□□□□ -1.04
SMARCD3-211ENST00000485592 F8W036 122 aa8.57□□□□□ -1.04
SMARCD3-211ENST00000485592 PPP1R2P9O14990 202 aa8.57□□□□□ -1.04
SMARCD3-211ENST00000485592 NCR2O95944 276 aa8.57□□□□□ -1.04
SMARCD3-211ENST00000485592 C10orf91Q5T1B1 145 aa8.57□□□□□ -1.04
SMARCD3-211ENST00000485592 FAM104BQ5XKR9 115 aa8.57□□□□□ -1.04
SMARCD3-211ENST00000485592 SDHAF1A6NFY7 115 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 SMKR1H3BMG3 65 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 H7C423 109 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 APCSP02743 223 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 CAMPP49913 170 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 KRTAP10-8P60410 259 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 HBBP68871 147 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 Q6ZRP5 223 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 NRACQ8N912 160 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 ANAPC16Q96DE5 110 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 MRAP2Q96G30 205 aa8.56□□□□□ -1.04
SMARCD3-211ENST00000485592 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 A0A1B0GW15 77 aa8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 IGKV2-29A2NJV5 120 aaPredicted RBP8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 MT-ND4LP03901 98 aa8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 FOXI1Q12951 378 aa8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 MRPL51Q4U2R6 128 aaKnown RBP8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 CARD19Q96LW7 228 aa8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 CARHSP1Q9Y2V2 147 aaKnown RBP8.55□□□□□ -1.04
SMARCD3-211ENST00000485592 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
SMARCD3-211ENST00000485592 FGF6P10767 208 aa8.54□□□□□ -1.04
SMARCD3-211ENST00000485592 ZNF25P17030 456 aaPredicted RBP8.54□□□□□ -1.04
SMARCD3-211ENST00000485592 XCL1P47992 114 aa8.54□□□□□ -1.04
SMARCD3-211ENST00000485592 ATP5L2Q7Z4Y8 100 aa8.54□□□□□ -1.04
SMARCD3-211ENST00000485592 OR5A1Q8NGJ0 315 aa8.54□□□□□ -1.04
SMARCD3-211ENST00000485592 BTF3L4Q96K17 158 aa8.54□□□□□ -1.04
SMARCD3-211ENST00000485592 POLR2KP53803 58 aaKnown RBP8.53□□□□□ -1.04
SMARCD3-211ENST00000485592 TMEM101Q96IK0 257 aa8.53□□□□□ -1.04
SMARCD3-211ENST00000485592 TRBV27A0A0K0K1C4 114 aa8.52□□□□□ -1.05
SMARCD3-211ENST00000485592 TSHBP01222 138 aa8.52□□□□□ -1.05
SMARCD3-211ENST00000485592 SRSF9Q13242 221 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMARCD3-211ENST00000485592 ZNF561-AS1K7EIQ3 104 aa8.51□□□□□ -1.05
SMARCD3-211ENST00000485592 CCL25O15444 150 aa8.51□□□□□ -1.05
SMARCD3-211ENST00000485592 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
SMARCD3-211ENST00000485592 IMMP2LQ96T52 175 aa8.51□□□□□ -1.05
SMARCD3-211ENST00000485592 CTDSP1Q9GZU7 261 aa8.51□□□□□ -1.05
SMARCD3-211ENST00000485592 ST20Q9HBF5 79 aa8.51□□□□□ -1.05
SMARCD3-211ENST00000485592 TMEM242Q9NWH2 141 aa8.51□□□□□ -1.05
SMARCD3-211ENST00000485592 TRBV24-1A0A075B6N3 115 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 D6R8Y8 96 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 I3L3M4 83 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 S100A8P05109 93 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 ESDP10768 282 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 SUMO2P61956 95 aaKnown RBP8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 SYCNQ0VAF6 134 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 SS18Q15532 418 aa8.5□□□□□ -1.05
SMARCD3-211ENST00000485592 C7orf77A4D0Y5 90 aa8.49□□□□□ -1.05
SMARCD3-211ENST00000485592 NPYP01303 97 aa8.49□□□□□ -1.05
SMARCD3-211ENST00000485592 PMCHP20382 165 aa8.49□□□□□ -1.05
SMARCD3-211ENST00000485592 PTTG1IPP53801 180 aa8.49□□□□□ -1.05
SMARCD3-211ENST00000485592 LOC107984640A0A0U1RRK4 108 aa8.48□□□□□ -1.05
SMARCD3-211ENST00000485592 TNFRSF6BO95407 300 aa8.48□□□□□ -1.05
SMARCD3-211ENST00000485592 CKS2P33552 79 aa8.48□□□□□ -1.05
SMARCD3-211ENST00000485592 GAGE2BQ13066 116 aa8.48□□□□□ -1.05
SMARCD3-211ENST00000485592 PPP1R17O96001 155 aa8.47□□□□□ -1.05
SMARCD3-211ENST00000485592 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
SMARCD3-211ENST00000485592 RHEBQ15382 184 aa8.47□□□□□ -1.05
SMARCD3-211ENST00000485592 CD164L2Q6UWJ8 174 aa8.47□□□□□ -1.05
SMARCD3-211ENST00000485592 C20orf78Q9BR46 151 aa8.47□□□□□ -1.05
SMARCD3-211ENST00000485592 PPBPP02775 128 aa8.46□□□□□ -1.06
SMARCD3-211ENST00000485592 TMEM136Q6ZRR5 245 aa8.46□□□□□ -1.06
SMARCD3-211ENST00000485592 ORMDL3Q8N138 153 aa8.46□□□□□ -1.06
SMARCD3-211ENST00000485592 SMIM2Q9BVW6 85 aa8.46□□□□□ -1.06
SMARCD3-211ENST00000485592 TRAV9-1A0A075B6T8 112 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms