RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 OCC1Q8TAD7 63 aa10.73□□□□□ -0.69
DDR1-245ENST00000484556 RNASE7Q9H1E1 156 aaKnown RBP10.73□□□□□ -0.69
DDR1-245ENST00000484556 CTRLP40313 264 aa10.72□□□□□ -0.69
DDR1-245ENST00000484556 FOXI1Q12951 378 aa10.71□□□□□ -0.69
DDR1-245ENST00000484556 TWIST1Q15672 202 aa10.71□□□□□ -0.69
DDR1-245ENST00000484556 C9orf116Q5BN46 136 aaPredicted RBP10.71□□□□□ -0.69
DDR1-245ENST00000484556 PGLYRP4Q96LB8 373 aa10.71□□□□□ -0.69
DDR1-245ENST00000484556 CNFNQ9BYD5 112 aa10.71□□□□□ -0.69
DDR1-245ENST00000484556 GATD1Q8NB37 220 aa10.7□□□□□ -0.7
DDR1-245ENST00000484556 RPP21Q9H633 154 aaKnown RBP10.7□□□□□ -0.7
DDR1-245ENST00000484556 RPL13AP40429 203 aaKnown RBP10.69□□□□□ -0.7
DDR1-245ENST00000484556 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
DDR1-245ENST00000484556 LOC107984640A0A0U1RRK4 108 aa10.68□□□□□ -0.7
DDR1-245ENST00000484556 TMEM250H0YL14 139 aa10.68□□□□□ -0.7
DDR1-245ENST00000484556 FOXA3P55318 350 aaPredicted RBP10.68□□□□□ -0.7
DDR1-245ENST00000484556 KRTAP11-1Q8IUC1 163 aa10.67□□□□□ -0.7
DDR1-245ENST00000484556 XCL1P47992 114 aa10.66□□□□□ -0.7
DDR1-245ENST00000484556 COTL1Q14019 142 aa10.66□□□□□ -0.7
DDR1-245ENST00000484556 RPL39LQ96EH5 51 aaKnown RBP10.66□□□□□ -0.7
DDR1-245ENST00000484556 A0A087WZ39 114 aa10.65□□□□□ -0.7
DDR1-245ENST00000484556 IGHV1-58A0A0C4DH39 117 aa10.65□□□□□ -0.7
DDR1-245ENST00000484556 ZNF561-AS1K7EIQ3 104 aa10.64□□□□□ -0.71
DDR1-245ENST00000484556 EIF5A2Q9GZV4 153 aaKnown RBP10.64□□□□□ -0.71
DDR1-245ENST00000484556 CDIP1Q9H305 208 aa10.64□□□□□ -0.71
DDR1-245ENST00000484556 GATCO43716 136 aaKnown RBP10.63□□□□□ -0.71
DDR1-245ENST00000484556 SRSF3P84103 164 aaKnown RBP10.63□□□□□ -0.71
DDR1-245ENST00000484556 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
DDR1-245ENST00000484556 CAMPP49913 170 aa10.62□□□□□ -0.71
DDR1-245ENST00000484556 LINC01547P58512 204 aaPredicted RBP10.62□□□□□ -0.71
DDR1-245ENST00000484556 FAM231DQ6ZW35 169 aa10.62□□□□□ -0.71
DDR1-245ENST00000484556 FAM210AQ96ND0 272 aa10.62□□□□□ -0.71
DDR1-245ENST00000484556 RETNLBQ9BQ08 111 aa10.62□□□□□ -0.71
DDR1-245ENST00000484556 CCL25O15444 150 aa10.61□□□□□ -0.71
DDR1-245ENST00000484556 FGF6P10767 208 aa10.61□□□□□ -0.71
DDR1-245ENST00000484556 CEBPGP53567 150 aa10.61□□□□□ -0.71
DDR1-245ENST00000484556 AMMECR1LQ6DCA0 310 aa10.61□□□□□ -0.71
DDR1-245ENST00000484556 RNASEKQ6P5S7 137 aaKnown RBP10.61□□□□□ -0.71
DDR1-245ENST00000484556 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.6□□□□□ -0.71
DDR1-245ENST00000484556 IGKV2-29A2NJV5 120 aaPredicted RBP10.6□□□□□ -0.71
DDR1-245ENST00000484556 SDHAF1A6NFY7 115 aa10.6□□□□□ -0.71
DDR1-245ENST00000484556 A8MWL6 223 aa10.6□□□□□ -0.71
DDR1-245ENST00000484556 TEX261Q6UWH6 196 aa10.6□□□□□ -0.71
DDR1-245ENST00000484556 SMIM15Q7Z3B0 74 aa10.6□□□□□ -0.71
DDR1-245ENST00000484556 IGLV4-69A0A075B6H9 119 aa10.59□□□□□ -0.71
DDR1-245ENST00000484556 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.59□□□□□ -0.71
DDR1-245ENST00000484556 NCR2O95944 276 aa10.59□□□□□ -0.71
DDR1-245ENST00000484556 ISOC2Q96AB3 205 aa10.58□□□□□ -0.72
DDR1-245ENST00000484556 SMIM7Q9BQ49 75 aa10.58□□□□□ -0.72
DDR1-245ENST00000484556 APOMO95445 188 aa10.57□□□□□ -0.72
DDR1-245ENST00000484556 APCSP02743 223 aa10.57□□□□□ -0.72
DDR1-245ENST00000484556 CT83Q5H943 113 aa10.57□□□□□ -0.72
DDR1-245ENST00000484556 NUP35Q8NFH5 326 aa10.57□□□□□ -0.72
DDR1-245ENST00000484556 OR5A1Q8NGJ0 315 aa10.57□□□□□ -0.72
DDR1-245ENST00000484556 CARHSP1Q9Y2V2 147 aaKnown RBP10.57□□□□□ -0.72
DDR1-245ENST00000484556 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
DDR1-245ENST00000484556 FAM168BA1KXE4 195 aa10.56□□□□□ -0.72
DDR1-245ENST00000484556 H7C423 109 aa10.56□□□□□ -0.72
DDR1-245ENST00000484556 I3L3M4 83 aa10.56□□□□□ -0.72
DDR1-245ENST00000484556 LINC01551Q86U37 167 aa10.56□□□□□ -0.72
DDR1-245ENST00000484556 LINC00959A0A1B0GUT2 108 aa10.55□□□□□ -0.72
DDR1-245ENST00000484556 ZNF727A8MUV8 499 aa10.55□□□□□ -0.72
DDR1-245ENST00000484556 PMCHP20382 165 aa10.55□□□□□ -0.72
DDR1-245ENST00000484556 FAM74A3Q4VXF1 159 aa10.55□□□□□ -0.72
DDR1-245ENST00000484556 CAMK2N2Q96S95 79 aa10.55□□□□□ -0.72
DDR1-245ENST00000484556 OPRPNQ99935 248 aaPredicted RBP10.55□□□□□ -0.72
DDR1-245ENST00000484556 SMDT1Q9H4I9 107 aa10.55□□□□□ -0.72
DDR1-245ENST00000484556 HIGD1CA8MV81 97 aa10.54□□□□□ -0.72
DDR1-245ENST00000484556 TSHBP01222 138 aa10.54□□□□□ -0.72
DDR1-245ENST00000484556 SRP19P09132 144 aaKnown RBP10.54□□□□□ -0.72
DDR1-245ENST00000484556 ESDP10768 282 aa10.54□□□□□ -0.72
DDR1-245ENST00000484556 PEA15Q15121 130 aa10.54□□□□□ -0.72
DDR1-245ENST00000484556 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
DDR1-245ENST00000484556 TMEM191AQ9H0A3 160 aa10.54□□□□□ -0.72
DDR1-245ENST00000484556 A0A1B0GUT8 65 aa10.53□□□□□ -0.72
DDR1-245ENST00000484556 RAB4AP20338 218 aa10.53□□□□□ -0.72
DDR1-245ENST00000484556 TPRXLQ17RH7 258 aa10.53□□□□□ -0.72
DDR1-245ENST00000484556 BORCS7Q96B45 105 aa10.53□□□□□ -0.72
DDR1-245ENST00000484556 ST20Q9HBF5 79 aa10.53□□□□□ -0.72
DDR1-245ENST00000484556 OSTCQ9NRP0 149 aa10.53□□□□□ -0.72
DDR1-245ENST00000484556 ZNF25P17030 456 aaPredicted RBP10.52□□□□□ -0.73
DDR1-245ENST00000484556 POLR2KP53803 58 aaKnown RBP10.52□□□□□ -0.73
DDR1-245ENST00000484556 FAM19A5Q7Z5A7 132 aaPredicted RBP10.52□□□□□ -0.73
DDR1-245ENST00000484556 TMEM242Q9NWH2 141 aa10.52□□□□□ -0.73
DDR1-245ENST00000484556 RAB14P61106 215 aa10.51□□□□□ -0.73
DDR1-245ENST00000484556 AMN1Q8IY45 258 aa10.51□□□□□ -0.73
DDR1-245ENST00000484556 V9GYV3 84 aa10.51□□□□□ -0.73
DDR1-245ENST00000484556 A0A087X002 238 aa10.5□□□□□ -0.73
DDR1-245ENST00000484556 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
DDR1-245ENST00000484556 CD164L2Q6UWJ8 174 aa10.5□□□□□ -0.73
DDR1-245ENST00000484556 BTF3L4Q96K17 158 aa10.5□□□□□ -0.73
DDR1-245ENST00000484556 TRBV27A0A0K0K1C4 114 aa10.49□□□□□ -0.73
DDR1-245ENST00000484556 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
DDR1-245ENST00000484556 MRAP2Q96G30 205 aa10.49□□□□□ -0.73
DDR1-245ENST00000484556 TMEM101Q96IK0 257 aa10.49□□□□□ -0.73
DDR1-245ENST00000484556 CDC42SE2Q9NRR3 84 aa10.49□□□□□ -0.73
DDR1-245ENST00000484556 KRTAP9-7A8MTY7 169 aa10.48□□□□□ -0.73
DDR1-245ENST00000484556 MALP21145 153 aa10.48□□□□□ -0.73
DDR1-245ENST00000484556 UBE2BP63146 152 aa10.48□□□□□ -0.73
DDR1-245ENST00000484556 SS18Q15532 418 aa10.48□□□□□ -0.73
DDR1-245ENST00000484556 MRPL52Q86TS9 123 aaKnown RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 197.6 ms