RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 GAGE6Q13070 117 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 MRPL54Q6P161 138 aaKnown RBP6.61□□□□□ -1.35
CPSF4-213ENST00000484112 ENHOQ6UWT2 76 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 Q8N814 137 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 NRACQ8N912 160 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 Q8N976 141 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 KIR2DL4Q99706 377 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 LAMTOR2Q9Y2Q5 125 aa6.61□□□□□ -1.35
CPSF4-213ENST00000484112 IGKV2D-24A0A075B6R9 120 aa6.6□□□□□ -1.35
CPSF4-213ENST00000484112 TGIF2-C20orf24A0A0A6YYL0 155 aa6.6□□□□□ -1.35
CPSF4-213ENST00000484112 KRTAP29-1A8MX34 341 aaPredicted RBP6.6□□□□□ -1.35
CPSF4-213ENST00000484112 ESDP10768 282 aa6.6□□□□□ -1.35
CPSF4-213ENST00000484112 RPS10P46783 165 aaKnown RBP6.6□□□□□ -1.35
CPSF4-213ENST00000484112 C14orf177Q52M58 125 aa6.6□□□□□ -1.35
CPSF4-213ENST00000484112 TSHBP01222 138 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 REG3AQ06141 175 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 AMMECR1LQ6DCA0 310 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 MRPL52Q86TS9 123 aaKnown RBP6.59□□□□□ -1.35
CPSF4-213ENST00000484112 ORMDL3Q8N138 153 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 LINC00528Q8N1L1 170 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 LINC00269Q8N2A0 174 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 C20orf203Q8NBC4 194 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 DEFB104AQ8WTQ1 72 aa6.59□□□□□ -1.35
CPSF4-213ENST00000484112 PRSS47A8MTI9 375 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 D6R8Y8 96 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 GAS8-AS1O95177 125 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 TNFRSF6BO95407 300 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 FGF6P10767 208 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 FCER1GP30273 86 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 COX19Q49B96 90 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 TMEM18Q96B42 140 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 TMEM101Q96IK0 257 aa6.58□□□□□ -1.36
CPSF4-213ENST00000484112 CSDC2Q9Y534 153 aaKnown RBP6.58□□□□□ -1.36
CPSF4-213ENST00000484112 IGLV4-60A0A075B6I1 120 aa6.57□□□□□ -1.36
CPSF4-213ENST00000484112 SMKR1H3BMG3 65 aa6.57□□□□□ -1.36
CPSF4-213ENST00000484112 TMEM136Q6ZRR5 245 aa6.57□□□□□ -1.36
CPSF4-213ENST00000484112 K7EMI3 77 aa6.56□□□□□ -1.36
CPSF4-213ENST00000484112 LECT2O14960 151 aa6.56□□□□□ -1.36
CPSF4-213ENST00000484112 CCL25O15444 150 aa6.56□□□□□ -1.36
CPSF4-213ENST00000484112 RNASEKQ6P5S7 137 aaKnown RBP6.56□□□□□ -1.36
CPSF4-213ENST00000484112 TIMM21Q9BVV7 248 aa6.56□□□□□ -1.36
CPSF4-213ENST00000484112 SMIM2Q9BVW6 85 aa6.56□□□□□ -1.36
CPSF4-213ENST00000484112 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.55□□□□□ -1.36
CPSF4-213ENST00000484112 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.55□□□□□ -1.36
CPSF4-213ENST00000484112 IGKV2-29A2NJV5 120 aaPredicted RBP6.55□□□□□ -1.36
CPSF4-213ENST00000484112 C5orf52A6NGY3 159 aa6.55□□□□□ -1.36
CPSF4-213ENST00000484112 HLA-DQA1P01909 254 aa6.55□□□□□ -1.36
CPSF4-213ENST00000484112 TRGC2P03986 189 aa6.55□□□□□ -1.36
CPSF4-213ENST00000484112 WFDC2Q14508 124 aa6.55□□□□□ -1.36
CPSF4-213ENST00000484112 OR5A1Q8NGJ0 315 aa6.55□□□□□ -1.36
CPSF4-213ENST00000484112 BAALCQ8WXS3 180 aa6.55□□□□□ -1.36
CPSF4-213ENST00000484112 PRELID3AQ96N28 172 aa6.55□□□□□ -1.36
CPSF4-213ENST00000484112 SRRM2Q9UQ35 2752 aaKnown RBP6.54□□□□□ -1.36
CPSF4-213ENST00000484112 DNAH8Q96JB1 4490 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BKO60814 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 NPYP01303 97 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 MT-ND6P03923 174 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BJP06899 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BOP23527 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BBP33778 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BDP58876 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BCP62807 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST2H2BEQ16778 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 LINC01620Q4KN68 170 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.54□□□□□ -1.36
CPSF4-213ENST00000484112 DGAT2L7PQ6IED9 249 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 KRTAP26-1Q6PEX3 210 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BHQ93079 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BNQ99877 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 HIST1H2BMQ99879 126 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 GNB1LQ9BYB4 327 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 MAP1LC3AQ9H492 121 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 CDC42SE2Q9NRR3 84 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 PLA2G2DQ9UNK4 145 aa6.54□□□□□ -1.36
CPSF4-213ENST00000484112 S100A6P06703 90 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 G0S2P27469 103 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 COA6Q5JTJ3 125 aaKnown RBP6.53□□□□□ -1.36
CPSF4-213ENST00000484112 CFAP161Q6P656 301 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 CLPSL2Q6UWE3 100 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 Q6ZSA8 131 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 ZNF664Q8N3J9 261 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 SPANXA1Q9NS26 97 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 UBE2D4Q9Y2X8 147 aa6.53□□□□□ -1.36
CPSF4-213ENST00000484112 SCXQ7RTU7 201 aa6.52□□□□□ -1.37
CPSF4-213ENST00000484112 Q8N8P6 123 aa6.52□□□□□ -1.37
CPSF4-213ENST00000484112 NXT2Q9NPJ8 142 aaKnown RBP6.52□□□□□ -1.37
CPSF4-213ENST00000484112 IGLV10-54A0A075B6I4 117 aa6.51□□□□□ -1.37
CPSF4-213ENST00000484112 USP17L23D6RBM5 183 aa6.51□□□□□ -1.37
CPSF4-213ENST00000484112 NPSP0C0P6 89 aa6.51□□□□□ -1.37
CPSF4-213ENST00000484112 SNRPEP62304 92 aaKnown RBP6.51□□□□□ -1.37
CPSF4-213ENST00000484112 MRPS36P82909 103 aaKnown RBP6.51□□□□□ -1.37
CPSF4-213ENST00000484112 SS18Q15532 418 aa6.51□□□□□ -1.37
CPSF4-213ENST00000484112 ORMDL2Q53FV1 153 aa6.51□□□□□ -1.37
CPSF4-213ENST00000484112 PYGO1Q9Y3Y4 419 aa6.51□□□□□ -1.37
CPSF4-213ENST00000484112 UBR4Q5T4S7 5183 aa6.5□□□□□ -1.37
CPSF4-213ENST00000484112 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
CPSF4-213ENST00000484112 LINC01549A6NIU2 74 aa6.5□□□□□ -1.37
CPSF4-213ENST00000484112 CHCHD10Q8WYQ3 142 aaPredicted RBP6.5□□□□□ -1.37
CPSF4-213ENST00000484112 TRAPPC1Q9Y5R8 145 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms