RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 GNG13Q9P2W3 67 aa7.74□□□□□ -1.17
UBR4-213ENST00000483922 I3L3M4 83 aa7.73□□□□□ -1.17
UBR4-213ENST00000483922 GNG4P50150 75 aa7.73□□□□□ -1.17
UBR4-213ENST00000483922 KRTAP7-1Q8IUC3 87 aa7.73□□□□□ -1.17
UBR4-213ENST00000483922 TRBV6-5A0A0K0K1A5 114 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 FAM168BA1KXE4 195 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 H0Y9J4 135 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 K7EN84 100 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 APOMO95445 188 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 PMCHP20382 165 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 SS18Q15532 418 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 PRR4Q16378 134 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 SMIM12Q96EX1 92 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 RNASE7Q9H1E1 156 aaKnown RBP7.72□□□□□ -1.17
UBR4-213ENST00000483922 PKIGQ9Y2B9 76 aa7.72□□□□□ -1.17
UBR4-213ENST00000483922 XKRY2A2RUG3 117 aa7.71□□□□□ -1.18
UBR4-213ENST00000483922 MRPL52Q86TS9 123 aaKnown RBP7.71□□□□□ -1.18
UBR4-213ENST00000483922 DIRC1Q969H9 104 aa7.71□□□□□ -1.18
UBR4-213ENST00000483922 TMEM101Q96IK0 257 aa7.71□□□□□ -1.18
UBR4-213ENST00000483922 MANBALQ9NQG1 85 aa7.71□□□□□ -1.18
UBR4-213ENST00000483922 TMEM242Q9NWH2 141 aa7.71□□□□□ -1.18
UBR4-213ENST00000483922 TRAV1-1A0A0B4J248 108 aa7.7□□□□□ -1.18
UBR4-213ENST00000483922 BCL2L11O43521 198 aa7.7□□□□□ -1.18
UBR4-213ENST00000483922 POLR2KP53803 58 aaKnown RBP7.7□□□□□ -1.18
UBR4-213ENST00000483922 ZNF345Q14585 488 aa7.7□□□□□ -1.18
UBR4-213ENST00000483922 BTF3L4Q96K17 158 aa7.7□□□□□ -1.18
UBR4-213ENST00000483922 RNASE13Q5GAN3 156 aaKnown RBP7.69□□□□□ -1.18
UBR4-213ENST00000483922 OCC1Q8TAD7 63 aa7.69□□□□□ -1.18
UBR4-213ENST00000483922 C2orf48Q96LS8 159 aa7.69□□□□□ -1.18
UBR4-213ENST00000483922 CAMK2N2Q96S95 79 aa7.69□□□□□ -1.18
UBR4-213ENST00000483922 MED9Q9NWA0 146 aa7.69□□□□□ -1.18
UBR4-213ENST00000483922 IGLV1-50A0A075B6I6 118 aa7.68□□□□□ -1.18
UBR4-213ENST00000483922 EIF5AP63241 154 aaKnown RBP7.68□□□□□ -1.18
UBR4-213ENST00000483922 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
UBR4-213ENST00000483922 C10orf25Q5T742 122 aa7.68□□□□□ -1.18
UBR4-213ENST00000483922 EIF5AL1Q6IS14 154 aaKnown RBP7.68□□□□□ -1.18
UBR4-213ENST00000483922 C5orf38Q86SI9 138 aa7.68□□□□□ -1.18
UBR4-213ENST00000483922 ISOC2Q96AB3 205 aa7.68□□□□□ -1.18
UBR4-213ENST00000483922 RPP21Q9H633 154 aaKnown RBP7.68□□□□□ -1.18
UBR4-213ENST00000483922 A0A087WZ39 114 aa7.67□□□□□ -1.18
UBR4-213ENST00000483922 COX7A2LO14548 114 aa7.67□□□□□ -1.18
UBR4-213ENST00000483922 FAM104AQ969W3 186 aa7.67□□□□□ -1.18
UBR4-213ENST00000483922 MRAP2Q96G30 205 aa7.67□□□□□ -1.18
UBR4-213ENST00000483922 TRBV27A0A0K0K1C4 114 aa7.66□□□□□ -1.18
UBR4-213ENST00000483922 HMSDA8MTL9 139 aa7.66□□□□□ -1.18
UBR4-213ENST00000483922 C1orf196B1AJZ1 125 aa7.66□□□□□ -1.18
UBR4-213ENST00000483922 MALP21145 153 aa7.66□□□□□ -1.18
UBR4-213ENST00000483922 TEX261Q6UWH6 196 aa7.66□□□□□ -1.18
UBR4-213ENST00000483922 UBE2D4Q9Y2X8 147 aa7.66□□□□□ -1.18
UBR4-213ENST00000483922 PDE6DO43924 150 aa7.65□□□□□ -1.18
UBR4-213ENST00000483922 RNF151Q2KHN1 245 aa7.65□□□□□ -1.18
UBR4-213ENST00000483922 ST20Q9HBF5 79 aa7.65□□□□□ -1.18
UBR4-213ENST00000483922 RAB4AP20338 218 aa7.64□□□□□ -1.19
UBR4-213ENST00000483922 BIN3Q9NQY0 253 aa7.64□□□□□ -1.19
UBR4-213ENST00000483922 TRAV13-1A0A0B4J241 112 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 A0A0U1RQV1 116 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 KANTRA0A1W2PQU2 76 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 C7orf77A4D0Y5 90 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 SMKR1H3BMG3 65 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 SPAG11BQ08648 103 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 UNQ6190/PRO20217Q6UXQ8 127 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 SMIM15Q7Z3B0 74 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 MRPL35Q9NZE8 188 aaKnown RBP7.63□□□□□ -1.19
UBR4-213ENST00000483922 C6orf48Q9UBA6 75 aa7.63□□□□□ -1.19
UBR4-213ENST00000483922 CSDC2Q9Y534 153 aaKnown RBP7.63□□□□□ -1.19
UBR4-213ENST00000483922 TSPAN13O95857 204 aa7.62□□□□□ -1.19
UBR4-213ENST00000483922 TLX1NBP0CAT3 122 aa7.62□□□□□ -1.19
UBR4-213ENST00000483922 Q6ZUT4 128 aa7.62□□□□□ -1.19
UBR4-213ENST00000483922 FAM19A5Q7Z5A7 132 aaPredicted RBP7.62□□□□□ -1.19
UBR4-213ENST00000483922 NRACQ8N912 160 aa7.61□□□□□ -1.19
UBR4-213ENST00000483922 FAM210AQ96ND0 272 aa7.61□□□□□ -1.19
UBR4-213ENST00000483922 IGHV3OR16-9A0A0B4J2B5 98 aa7.6□□□□□ -1.19
UBR4-213ENST00000483922 GATCO43716 136 aaKnown RBP7.6□□□□□ -1.19
UBR4-213ENST00000483922 AMN1Q8IY45 258 aa7.6□□□□□ -1.19
UBR4-213ENST00000483922 TMEM191AQ9H0A3 160 aa7.6□□□□□ -1.19
UBR4-213ENST00000483922 KIAA0087Q14695 138 aa7.59□□□□□ -1.19
UBR4-213ENST00000483922 GAGE2EQ4V326 116 aa7.59□□□□□ -1.19
UBR4-213ENST00000483922 FAM231DQ6ZW35 169 aa7.59□□□□□ -1.19
UBR4-213ENST00000483922 OR10D4PQ8NGN7 298 aa7.59□□□□□ -1.19
UBR4-213ENST00000483922 ORAOV1Q8WV07 137 aa7.59□□□□□ -1.19
UBR4-213ENST00000483922 GAGE2DQ9UEU5 116 aa7.59□□□□□ -1.19
UBR4-213ENST00000483922 CARHSP1Q9Y2V2 147 aaKnown RBP7.59□□□□□ -1.19
UBR4-213ENST00000483922 VCYO14598 125 aa7.58□□□□□ -1.2
UBR4-213ENST00000483922 UBE2D1P51668 147 aa7.58□□□□□ -1.2
UBR4-213ENST00000483922 C9orf129Q5T035 196 aaKnown RBP7.58□□□□□ -1.2
UBR4-213ENST00000483922 IMMP2LQ96T52 175 aa7.58□□□□□ -1.2
UBR4-213ENST00000483922 SMDT1Q9H4I9 107 aa7.58□□□□□ -1.2
UBR4-213ENST00000483922 A0A087X002 238 aa7.57□□□□□ -1.2
UBR4-213ENST00000483922 A8MWL6 223 aa7.57□□□□□ -1.2
UBR4-213ENST00000483922 M0QXV9 152 aa7.57□□□□□ -1.2
UBR4-213ENST00000483922 RPL13AP40429 203 aaKnown RBP7.57□□□□□ -1.2
UBR4-213ENST00000483922 TSKUQ8WUA8 353 aa7.57□□□□□ -1.2
UBR4-213ENST00000483922 NDUFA1O15239 70 aa7.56□□□□□ -1.2
UBR4-213ENST00000483922 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
UBR4-213ENST00000483922 TMEM241Q24JQ0 296 aa7.56□□□□□ -1.2
UBR4-213ENST00000483922 TIMM21Q9BVV7 248 aa7.56□□□□□ -1.2
UBR4-213ENST00000483922 A0A1B0GUT8 65 aa7.55□□□□□ -1.2
UBR4-213ENST00000483922 HIGD1CA8MV81 97 aa7.55□□□□□ -1.2
UBR4-213ENST00000483922 F8WDY8 70 aa7.55□□□□□ -1.2
UBR4-213ENST00000483922 TEX46H3BTG2 121 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms