RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 TRGC2P03986 189 aa9.08□□□□□ -0.96
VARS-225ENST00000482996 Q5VSD8 79 aa9.08□□□□□ -0.96
VARS-225ENST00000482996 TMEM136Q6ZRR5 245 aa9.08□□□□□ -0.96
VARS-225ENST00000482996 TMA7Q9Y2S6 64 aaKnown RBP9.08□□□□□ -0.96
VARS-225ENST00000482996 VPS13BQ7Z7G8 4022 aa9.08□□□□□ -0.96
VARS-225ENST00000482996 H7C423 109 aa9.07□□□□□ -0.96
VARS-225ENST00000482996 RAB4AP20338 218 aa9.07□□□□□ -0.96
VARS-225ENST00000482996 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
VARS-225ENST00000482996 KRTAP26-1Q6PEX3 210 aa9.07□□□□□ -0.96
VARS-225ENST00000482996 Q6ZSA8 131 aa9.07□□□□□ -0.96
VARS-225ENST00000482996 AMN1Q8IY45 258 aa9.07□□□□□ -0.96
VARS-225ENST00000482996 RNF185Q96GF1 192 aa9.07□□□□□ -0.96
VARS-225ENST00000482996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
VARS-225ENST00000482996 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
VARS-225ENST00000482996 PPP1R17O96001 155 aa9.06□□□□□ -0.96
VARS-225ENST00000482996 RNASEKQ6P5S7 137 aaKnown RBP9.06□□□□□ -0.96
VARS-225ENST00000482996 S100A6P06703 90 aa9.05□□□□□ -0.96
VARS-225ENST00000482996 PRSS1P07477 247 aa9.05□□□□□ -0.96
VARS-225ENST00000482996 SRRM2Q9UQ35 2752 aaKnown RBP9.05□□□□□ -0.96
VARS-225ENST00000482996 GAS8-AS1O95177 125 aa9.04□□□□□ -0.96
VARS-225ENST00000482996 FGF6P10767 208 aa9.04□□□□□ -0.96
VARS-225ENST00000482996 FAM104BQ5XKR9 115 aa9.04□□□□□ -0.96
VARS-225ENST00000482996 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
VARS-225ENST00000482996 TMEM101Q96IK0 257 aa9.04□□□□□ -0.96
VARS-225ENST00000482996 IGKV3OR2-268A0A0C4DH90 116 aa9.03□□□□□ -0.96
VARS-225ENST00000482996 SMKR1H3BMG3 65 aa9.03□□□□□ -0.96
VARS-225ENST00000482996 TSHBP01222 138 aa9.03□□□□□ -0.96
VARS-225ENST00000482996 PPBPP02775 128 aa9.03□□□□□ -0.96
VARS-225ENST00000482996 INAFM2P0DMQ5 153 aa9.03□□□□□ -0.96
VARS-225ENST00000482996 ZNF25P17030 456 aaPredicted RBP9.03□□□□□ -0.96
VARS-225ENST00000482996 CKS2P33552 79 aa9.03□□□□□ -0.96
VARS-225ENST00000482996 POLR2KP53803 58 aaKnown RBP9.03□□□□□ -0.96
VARS-225ENST00000482996 ORMDL3Q8N138 153 aa9.03□□□□□ -0.96
VARS-225ENST00000482996 TRBV27A0A0K0K1C4 114 aa9.02□□□□□ -0.97
VARS-225ENST00000482996 VCYO14598 125 aa9.02□□□□□ -0.97
VARS-225ENST00000482996 ESDP10768 282 aa9.02□□□□□ -0.97
VARS-225ENST00000482996 KIAA1644Q3SXP7 199 aa9.02□□□□□ -0.97
VARS-225ENST00000482996 AP5S1Q9NUS5 200 aa9.02□□□□□ -0.97
VARS-225ENST00000482996 hDV102S1A0JD36 115 aa9.01□□□□□ -0.97
VARS-225ENST00000482996 GAGE12HA6NDE8 117 aa9.01□□□□□ -0.97
VARS-225ENST00000482996 FCER1GP30273 86 aa9.01□□□□□ -0.97
VARS-225ENST00000482996 SUMO2P61956 95 aaKnown RBP9.01□□□□□ -0.97
VARS-225ENST00000482996 MRPL51Q4U2R6 128 aaKnown RBP9.01□□□□□ -0.97
VARS-225ENST00000482996 CFAP161Q6P656 301 aa9.01□□□□□ -0.97
VARS-225ENST00000482996 SCXQ7RTU7 201 aa9.01□□□□□ -0.97
VARS-225ENST00000482996 OR5A1Q8NGJ0 315 aa9.01□□□□□ -0.97
VARS-225ENST00000482996 CHAC1Q9BUX1 264 aa9.01□□□□□ -0.97
VARS-225ENST00000482996 D6R8Y8 96 aa9□□□□□ -0.97
VARS-225ENST00000482996 SMAGPQ0VAQ4 97 aa9□□□□□ -0.97
VARS-225ENST00000482996 BAGE3Q86Y29 109 aa9□□□□□ -0.97
VARS-225ENST00000482996 NRACQ8N912 160 aa9□□□□□ -0.97
VARS-225ENST00000482996 C9orf163Q8N9P6 203 aa9□□□□□ -0.97
VARS-225ENST00000482996 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
VARS-225ENST00000482996 PRELID3AQ96N28 172 aa9□□□□□ -0.97
VARS-225ENST00000482996 KIR2DL4Q99706 377 aa9□□□□□ -0.97
VARS-225ENST00000482996 LAMTOR2Q9Y2Q5 125 aa9□□□□□ -0.97
VARS-225ENST00000482996 PLA2G1BP04054 148 aaKnown RBP8.99□□□□□ -0.97
VARS-225ENST00000482996 LINC00528Q8N1L1 170 aa8.99□□□□□ -0.97
VARS-225ENST00000482996 HERC1Q15751 4861 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BKO60814 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BJP06899 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BOP23527 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BBP33778 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 NDUFA6P56556 154 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BDP58876 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 CNBPP62633 177 aaKnown RBP8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BCP62807 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST2H2BEQ16778 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.98□□□□□ -0.97
VARS-225ENST00000482996 MRPL52Q86TS9 123 aaKnown RBP8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BHQ93079 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 C20orf78Q9BR46 151 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 MAP1LC3AQ9H492 121 aa8.98□□□□□ -0.97
VARS-225ENST00000482996 FLG2Q5D862 2391 aaPredicted RBP8.97□□□□□ -0.97
VARS-225ENST00000482996 TCAPO15273 167 aa8.97□□□□□ -0.97
VARS-225ENST00000482996 CIRBP-AS1Q8TBR5 109 aa8.97□□□□□ -0.97
VARS-225ENST00000482996 ALKBH7Q9BT30 221 aaPredicted RBP8.97□□□□□ -0.97
VARS-225ENST00000482996 RPL32P62910 135 aaKnown RBP8.96□□□□□ -0.98
VARS-225ENST00000482996 SS18Q15532 418 aa8.96□□□□□ -0.98
VARS-225ENST00000482996 FA2HQ7L5A8 372 aa8.96□□□□□ -0.98
VARS-225ENST00000482996 ZNF664Q8N3J9 261 aa8.96□□□□□ -0.98
VARS-225ENST00000482996 PRSS3P2Q8NHM4 247 aa8.96□□□□□ -0.98
VARS-225ENST00000482996 TMEM18Q96B42 140 aa8.96□□□□□ -0.98
VARS-225ENST00000482996 CDC42SE2Q9NRR3 84 aa8.96□□□□□ -0.98
VARS-225ENST00000482996 DMBT1Q9UGM3 2413 aaPredicted RBP8.95□□□□□ -0.98
VARS-225ENST00000482996 IGHV3-64A0A075B6Q5 118 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 LINC00959A0A1B0GUT2 108 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 PHOX2AO14813 284 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 TNFRSF6BO95407 300 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 S100A2P29034 98 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 XCL1P47992 114 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 C18orf32Q8TCD1 76 aa8.95□□□□□ -0.98
VARS-225ENST00000482996 LOC389332A0A1B0GUA5 103 aa8.94□□□□□ -0.98
VARS-225ENST00000482996 CCL25O15444 150 aa8.94□□□□□ -0.98
VARS-225ENST00000482996 NPYP01303 97 aa8.94□□□□□ -0.98
VARS-225ENST00000482996 FOXI1Q12951 378 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms