RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 XCL1P47992 114 aa10.72□□□□□ -0.69
VAMP4-204ENST00000482519 PNRC1Q12796 327 aaPredicted RBP10.72□□□□□ -0.69
VAMP4-204ENST00000482519 CHAC1Q9BUX1 264 aa10.72□□□□□ -0.69
VAMP4-204ENST00000482519 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
VAMP4-204ENST00000482519 A0A1B0GXF2 115 aa10.71□□□□□ -0.69
VAMP4-204ENST00000482519 D6R8Y8 96 aa10.71□□□□□ -0.69
VAMP4-204ENST00000482519 TNFRSF6BO95407 300 aa10.71□□□□□ -0.69
VAMP4-204ENST00000482519 MT-ND4LP03901 98 aa10.71□□□□□ -0.69
VAMP4-204ENST00000482519 LINC00528Q8N1L1 170 aa10.71□□□□□ -0.69
VAMP4-204ENST00000482519 CFAP161Q6P656 301 aa10.7□□□□□ -0.7
VAMP4-204ENST00000482519 MRPL52Q86TS9 123 aaKnown RBP10.7□□□□□ -0.7
VAMP4-204ENST00000482519 ZNF664Q8N3J9 261 aa10.7□□□□□ -0.7
VAMP4-204ENST00000482519 C9orf163Q8N9P6 203 aa10.7□□□□□ -0.7
VAMP4-204ENST00000482519 CIRBP-AS1Q8TBR5 109 aa10.7□□□□□ -0.7
VAMP4-204ENST00000482519 C20orf78Q9BR46 151 aa10.7□□□□□ -0.7
VAMP4-204ENST00000482519 CDC42SE2Q9NRR3 84 aa10.7□□□□□ -0.7
VAMP4-204ENST00000482519 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
VAMP4-204ENST00000482519 LINC00959A0A1B0GUT2 108 aa10.69□□□□□ -0.7
VAMP4-204ENST00000482519 CCL25O15444 150 aa10.69□□□□□ -0.7
VAMP4-204ENST00000482519 IFITM2Q01629 132 aa10.69□□□□□ -0.7
VAMP4-204ENST00000482519 HIGD2BQ4VC39 106 aa10.69□□□□□ -0.7
VAMP4-204ENST00000482519 ATP5L2Q7Z4Y8 100 aa10.69□□□□□ -0.7
VAMP4-204ENST00000482519 ANAPC16Q96DE5 110 aa10.69□□□□□ -0.7
VAMP4-204ENST00000482519 TRBV24-1A0A075B6N3 115 aa10.68□□□□□ -0.7
VAMP4-204ENST00000482519 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.68□□□□□ -0.7
VAMP4-204ENST00000482519 NPYP01303 97 aa10.68□□□□□ -0.7
VAMP4-204ENST00000482519 FOXI1Q12951 378 aa10.68□□□□□ -0.7
VAMP4-204ENST00000482519 SS18Q15532 418 aa10.68□□□□□ -0.7
VAMP4-204ENST00000482519 C15orf56Q8N910 161 aa10.68□□□□□ -0.7
VAMP4-204ENST00000482519 PPBPP02775 128 aa10.67□□□□□ -0.7
VAMP4-204ENST00000482519 SLPIP03973 132 aa10.67□□□□□ -0.7
VAMP4-204ENST00000482519 PLA2G1BP04054 148 aaKnown RBP10.67□□□□□ -0.7
VAMP4-204ENST00000482519 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
VAMP4-204ENST00000482519 SMAGPQ0VAQ4 97 aa10.67□□□□□ -0.7
VAMP4-204ENST00000482519 RNASE13Q5GAN3 156 aaKnown RBP10.67□□□□□ -0.7
VAMP4-204ENST00000482519 SMIM2Q9BVW6 85 aa10.67□□□□□ -0.7
VAMP4-204ENST00000482519 UBE2D4Q9Y2X8 147 aa10.67□□□□□ -0.7
VAMP4-204ENST00000482519 SDIM1Q6ZPB5 146 aa10.66□□□□□ -0.7
VAMP4-204ENST00000482519 TMEM136Q6ZRR5 245 aa10.66□□□□□ -0.7
VAMP4-204ENST00000482519 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
VAMP4-204ENST00000482519 TMEM18Q96B42 140 aa10.66□□□□□ -0.7
VAMP4-204ENST00000482519 DPH3Q96FX2 82 aa10.66□□□□□ -0.7
VAMP4-204ENST00000482519 IGHV3-64A0A075B6Q5 118 aa10.65□□□□□ -0.7
VAMP4-204ENST00000482519 TCAPO15273 167 aa10.65□□□□□ -0.7
VAMP4-204ENST00000482519 RPL32P62910 135 aaKnown RBP10.65□□□□□ -0.7
VAMP4-204ENST00000482519 PRELID3AQ96N28 172 aa10.65□□□□□ -0.7
VAMP4-204ENST00000482519 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.65□□□□□ -0.7
VAMP4-204ENST00000482519 RPL39P62891 51 aaKnown RBP10.64□□□□□ -0.71
VAMP4-204ENST00000482519 UQCC3Q6UW78 93 aa10.64□□□□□ -0.71
VAMP4-204ENST00000482519 TRAV13-1A0A0B4J241 112 aa10.63□□□□□ -0.71
VAMP4-204ENST00000482519 TMEM218A2RU14 115 aa10.63□□□□□ -0.71
VAMP4-204ENST00000482519 PANO1I0J062 215 aa10.63□□□□□ -0.71
VAMP4-204ENST00000482519 PHOX2AO14813 284 aa10.63□□□□□ -0.71
VAMP4-204ENST00000482519 CD164L2Q6UWJ8 174 aa10.63□□□□□ -0.71
VAMP4-204ENST00000482519 Q6ZUT4 128 aa10.63□□□□□ -0.71
VAMP4-204ENST00000482519 CSDC2Q9Y534 153 aaKnown RBP10.63□□□□□ -0.71
VAMP4-204ENST00000482519 GVQW2A0A096LPI5 108 aaPredicted RBP10.62□□□□□ -0.71
VAMP4-204ENST00000482519 LOC389332A0A1B0GUA5 103 aa10.62□□□□□ -0.71
VAMP4-204ENST00000482519 C1orf196B1AJZ1 125 aa10.62□□□□□ -0.71
VAMP4-204ENST00000482519 ADCYAP1P18509 176 aa10.62□□□□□ -0.71
VAMP4-204ENST00000482519 RAB5AP20339 215 aa10.62□□□□□ -0.71
VAMP4-204ENST00000482519 LINC00526Q96FQ7 95 aa10.62□□□□□ -0.71
VAMP4-204ENST00000482519 FLG2Q5D862 2391 aaPredicted RBP10.61□□□□□ -0.71
VAMP4-204ENST00000482519 IGHV1-58A0A0C4DH39 117 aa10.61□□□□□ -0.71
VAMP4-204ENST00000482519 MALP21145 153 aa10.61□□□□□ -0.71
VAMP4-204ENST00000482519 COMMD7Q86VX2 200 aa10.61□□□□□ -0.71
VAMP4-204ENST00000482519 TIMM21Q9BVV7 248 aa10.61□□□□□ -0.71
VAMP4-204ENST00000482519 CHTF8P0CG12 524 aa10.6□□□□□ -0.71
VAMP4-204ENST00000482519 COX6A2Q02221 97 aa10.6□□□□□ -0.71
VAMP4-204ENST00000482519 OPRPNQ99935 248 aaPredicted RBP10.6□□□□□ -0.71
VAMP4-204ENST00000482519 COX7A2LO14548 114 aa10.59□□□□□ -0.71
VAMP4-204ENST00000482519 MAP1LC3AQ9H492 121 aa10.59□□□□□ -0.71
VAMP4-204ENST00000482519 ZNF561-AS1K7EIQ3 104 aa10.58□□□□□ -0.72
VAMP4-204ENST00000482519 IMMP2LQ96T52 175 aa10.58□□□□□ -0.72
VAMP4-204ENST00000482519 CTDSP1Q9GZU7 261 aa10.58□□□□□ -0.72
VAMP4-204ENST00000482519 SPANXA1Q9NS26 97 aa10.58□□□□□ -0.72
VAMP4-204ENST00000482519 IGKV2-24A0A0C4DH68 120 aa10.57□□□□□ -0.72
VAMP4-204ENST00000482519 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
VAMP4-204ENST00000482519 PRSS3P2Q8NHM4 247 aa10.57□□□□□ -0.72
VAMP4-204ENST00000482519 SEC11CQ9BY50 192 aa10.57□□□□□ -0.72
VAMP4-204ENST00000482519 LAMTOR2Q9Y2Q5 125 aa10.57□□□□□ -0.72
VAMP4-204ENST00000482519 IFITM10A6NMD0 228 aa10.55□□□□□ -0.72
VAMP4-204ENST00000482519 IFI27P40305 119 aaPredicted RBP10.55□□□□□ -0.72
VAMP4-204ENST00000482519 RPL37AP61513 92 aaKnown RBP10.55□□□□□ -0.72
VAMP4-204ENST00000482519 FAM104AQ969W3 186 aa10.55□□□□□ -0.72
VAMP4-204ENST00000482519 CARD19Q96LW7 228 aa10.55□□□□□ -0.72
VAMP4-204ENST00000482519 MYCBP2O75592 4640 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 DMBT1Q9UGM3 2413 aaPredicted RBP10.54□□□□□ -0.72
VAMP4-204ENST00000482519 A0A087WYN8 130 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 PRSS47A8MTI9 375 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 S100PP25815 95 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 MRPS36P82909 103 aaKnown RBP10.54□□□□□ -0.72
VAMP4-204ENST00000482519 SYCNQ0VAF6 134 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 CIRBPQ14011 172 aaKnown RBP10.54□□□□□ -0.72
VAMP4-204ENST00000482519 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 Q8N8P6 123 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 SPACA4Q8TDM5 124 aa10.54□□□□□ -0.72
VAMP4-204ENST00000482519 IGLV4-69A0A075B6H9 119 aa10.53□□□□□ -0.72
VAMP4-204ENST00000482519 KIAA1644Q3SXP7 199 aa10.53□□□□□ -0.72
VAMP4-204ENST00000482519 APOMO95445 188 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms