RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 SRSF3P84103 164 aaKnown RBP12.81□□□□□ -0.36
MSH5-215ENST00000482280 SDIM1Q6ZPB5 146 aa12.81□□□□□ -0.36
MSH5-215ENST00000482280 TMEM18Q96B42 140 aa12.81□□□□□ -0.36
MSH5-215ENST00000482280 SRRM2Q9UQ35 2752 aaKnown RBP12.8□□□□□ -0.36
MSH5-215ENST00000482280 LINC00862A6NCI5 91 aa12.8□□□□□ -0.36
MSH5-215ENST00000482280 CKS2P33552 79 aa12.8□□□□□ -0.36
MSH5-215ENST00000482280 RAB14P61106 215 aa12.8□□□□□ -0.36
MSH5-215ENST00000482280 HIGD2BQ4VC39 106 aa12.8□□□□□ -0.36
MSH5-215ENST00000482280 MRPL52Q86TS9 123 aaKnown RBP12.8□□□□□ -0.36
MSH5-215ENST00000482280 CCL25O15444 150 aa12.79□□□□□ -0.36
MSH5-215ENST00000482280 FAM104BQ5XKR9 115 aa12.79□□□□□ -0.36
MSH5-215ENST00000482280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.79□□□□□ -0.36
MSH5-215ENST00000482280 LINC00959A0A1B0GUT2 108 aa12.78□□□□□ -0.36
MSH5-215ENST00000482280 TCAPO15273 167 aa12.78□□□□□ -0.36
MSH5-215ENST00000482280 HBBP68871 147 aa12.78□□□□□ -0.36
MSH5-215ENST00000482280 MRPL51Q4U2R6 128 aaKnown RBP12.78□□□□□ -0.36
MSH5-215ENST00000482280 ZNF664Q8N3J9 261 aa12.78□□□□□ -0.36
MSH5-215ENST00000482280 C15orf56Q8N910 161 aa12.78□□□□□ -0.36
MSH5-215ENST00000482280 PKIGQ9Y2B9 76 aa12.78□□□□□ -0.36
MSH5-215ENST00000482280 MRPL54Q6P161 138 aaKnown RBP12.77□□□□□ -0.37
MSH5-215ENST00000482280 CDC42SE2Q9NRR3 84 aa12.77□□□□□ -0.37
MSH5-215ENST00000482280 FAT1Q14517 4588 aa12.76□□□□□ -0.37
MSH5-215ENST00000482280 FOXI1Q12951 378 aa12.76□□□□□ -0.37
MSH5-215ENST00000482280 NRACQ8N912 160 aa12.76□□□□□ -0.37
MSH5-215ENST00000482280 C20orf78Q9BR46 151 aa12.76□□□□□ -0.37
MSH5-215ENST00000482280 GVQW2A0A096LPI5 108 aaPredicted RBP12.75□□□□□ -0.37
MSH5-215ENST00000482280 IGHV1-58A0A0C4DH39 117 aa12.75□□□□□ -0.37
MSH5-215ENST00000482280 SLPIP03973 132 aa12.74□□□□□ -0.37
MSH5-215ENST00000482280 MALP21145 153 aa12.74□□□□□ -0.37
MSH5-215ENST00000482280 CD164L2Q6UWJ8 174 aa12.74□□□□□ -0.37
MSH5-215ENST00000482280 DMBT1Q9UGM3 2413 aaPredicted RBP12.73□□□□□ -0.37
MSH5-215ENST00000482280 C1orf196B1AJZ1 125 aa12.73□□□□□ -0.37
MSH5-215ENST00000482280 ZNF561-AS1K7EIQ3 104 aa12.73□□□□□ -0.37
MSH5-215ENST00000482280 CSDC2Q9Y534 153 aaKnown RBP12.73□□□□□ -0.37
MSH5-215ENST00000482280 TNFRSF6BO95407 300 aa12.72□□□□□ -0.37
MSH5-215ENST00000482280 PPBPP02775 128 aa12.72□□□□□ -0.37
MSH5-215ENST00000482280 COX6A2Q02221 97 aa12.72□□□□□ -0.37
MSH5-215ENST00000482280 FLG2Q5D862 2391 aaPredicted RBP12.72□□□□□ -0.37
MSH5-215ENST00000482280 TRBV24-1A0A075B6N3 115 aa12.71□□□□□ -0.37
MSH5-215ENST00000482280 KRTAP29-1A8MX34 341 aaPredicted RBP12.71□□□□□ -0.37
MSH5-215ENST00000482280 D6R8Y8 96 aa12.71□□□□□ -0.37
MSH5-215ENST00000482280 PANO1I0J062 215 aa12.71□□□□□ -0.37
MSH5-215ENST00000482280 CHTF8P0CG12 524 aa12.71□□□□□ -0.37
MSH5-215ENST00000482280 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.37
MSH5-215ENST00000482280 CIRBPQ14011 172 aaKnown RBP12.71□□□□□ -0.37
MSH5-215ENST00000482280 ATP5L2Q7Z4Y8 100 aa12.71□□□□□ -0.37
MSH5-215ENST00000482280 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
MSH5-215ENST00000482280 A0A087WYN8 130 aa12.7□□□□□ -0.38
MSH5-215ENST00000482280 IGKV2-24A0A0C4DH68 120 aa12.7□□□□□ -0.38
MSH5-215ENST00000482280 COX7A2LO14548 114 aa12.7□□□□□ -0.38
MSH5-215ENST00000482280 RPL32P62910 135 aaKnown RBP12.7□□□□□ -0.38
MSH5-215ENST00000482280 MAJINQ3KP22 176 aa12.7□□□□□ -0.38
MSH5-215ENST00000482280 SPACA4Q8TDM5 124 aa12.7□□□□□ -0.38
MSH5-215ENST00000482280 C7orf33Q8WU49 177 aa12.7□□□□□ -0.38
MSH5-215ENST00000482280 TRAV13-1A0A0B4J241 112 aa12.69□□□□□ -0.38
MSH5-215ENST00000482280 MT-ND4LP03901 98 aa12.69□□□□□ -0.38
MSH5-215ENST00000482280 RAB5AP20339 215 aa12.69□□□□□ -0.38
MSH5-215ENST00000482280 CARD19Q96LW7 228 aa12.69□□□□□ -0.38
MSH5-215ENST00000482280 TIMM21Q9BVV7 248 aa12.69□□□□□ -0.38
MSH5-215ENST00000482280 SMIM2Q9BVW6 85 aa12.69□□□□□ -0.38
MSH5-215ENST00000482280 LINC00474Q9P2X8 69 aa12.69□□□□□ -0.38
MSH5-215ENST00000482280 PHOX2AO14813 284 aa12.68□□□□□ -0.38
MSH5-215ENST00000482280 RNASE13Q5GAN3 156 aaKnown RBP12.68□□□□□ -0.38
MSH5-215ENST00000482280 ORMDL3Q8N138 153 aa12.68□□□□□ -0.38
MSH5-215ENST00000482280 A0A1B0GXF2 115 aa12.67□□□□□ -0.38
MSH5-215ENST00000482280 APOMO95445 188 aa12.67□□□□□ -0.38
MSH5-215ENST00000482280 OXTP01178 125 aa12.67□□□□□ -0.38
MSH5-215ENST00000482280 KRTAP10-4P60372 401 aaPredicted RBP12.67□□□□□ -0.38
MSH5-215ENST00000482280 PRSS3P2Q8NHM4 247 aa12.67□□□□□ -0.38
MSH5-215ENST00000482280 ANAPC16Q96DE5 110 aa12.67□□□□□ -0.38
MSH5-215ENST00000482280 SYCNQ0VAF6 134 aa12.66□□□□□ -0.38
MSH5-215ENST00000482280 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
MSH5-215ENST00000482280 NPYP01303 97 aa12.65□□□□□ -0.38
MSH5-215ENST00000482280 TMEM136Q6ZRR5 245 aa12.65□□□□□ -0.38
MSH5-215ENST00000482280 Q6ZUT4 128 aa12.65□□□□□ -0.38
MSH5-215ENST00000482280 LINC00526Q96FQ7 95 aa12.65□□□□□ -0.38
MSH5-215ENST00000482280 VPS13BQ7Z7G8 4022 aa12.65□□□□□ -0.39
MSH5-215ENST00000482280 STPG4Q8N801 248 aa12.64□□□□□ -0.39
MSH5-215ENST00000482280 PRELID3AQ96N28 172 aa12.64□□□□□ -0.39
MSH5-215ENST00000482280 PLAC8Q9NZF1 115 aa12.64□□□□□ -0.39
MSH5-215ENST00000482280 DNAH8Q96JB1 4490 aa12.63□□□□□ -0.39
MSH5-215ENST00000482280 RPL39P62891 51 aaKnown RBP12.63□□□□□ -0.39
MSH5-215ENST00000482280 IFI27P40305 119 aaPredicted RBP12.62□□□□□ -0.39
MSH5-215ENST00000482280 CAMK2N2Q96S95 79 aa12.62□□□□□ -0.39
MSH5-215ENST00000482280 IGLV4-69A0A075B6H9 119 aa12.61□□□□□ -0.39
MSH5-215ENST00000482280 A0A096LNI7 61 aa12.61□□□□□ -0.39
MSH5-215ENST00000482280 C5orf38Q86SI9 138 aa12.61□□□□□ -0.39
MSH5-215ENST00000482280 MAP1LC3AQ9H492 121 aa12.61□□□□□ -0.39
MSH5-215ENST00000482280 LAMTOR2Q9Y2Q5 125 aa12.61□□□□□ -0.39
MSH5-215ENST00000482280 IFITM10A6NMD0 228 aa12.6□□□□□ -0.39
MSH5-215ENST00000482280 MRPS36P82909 103 aaKnown RBP12.59□□□□□ -0.39
MSH5-215ENST00000482280 LOC107984640A0A0U1RRK4 108 aa12.58□□□□□ -0.4
MSH5-215ENST00000482280 LOC389332A0A1B0GUA5 103 aa12.58□□□□□ -0.4
MSH5-215ENST00000482280 CLLU1Q5K131 121 aa12.58□□□□□ -0.4
MSH5-215ENST00000482280 MYCBP2O75592 4640 aa12.57□□□□□ -0.4
MSH5-215ENST00000482280 SPAG11BQ08648 103 aa12.57□□□□□ -0.4
MSH5-215ENST00000482280 C2orf48Q96LS8 159 aa12.57□□□□□ -0.4
MSH5-215ENST00000482280 TGIF2-C20orf24A0A0A6YYL0 155 aa12.56□□□□□ -0.4
MSH5-215ENST00000482280 GAGE2BQ13066 116 aa12.56□□□□□ -0.4
MSH5-215ENST00000482280 Q6ZRU5 148 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 201.3 ms