RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 CCL25O15444 150 aa11.73□□□□□ -0.53
CLK1-211ENST00000481641 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
CLK1-211ENST00000481641 POLR2KP53803 58 aaKnown RBP11.73□□□□□ -0.53
CLK1-211ENST00000481641 MAJINQ3KP22 176 aa11.73□□□□□ -0.53
CLK1-211ENST00000481641 LINC00526Q96FQ7 95 aa11.73□□□□□ -0.53
CLK1-211ENST00000481641 PLAC8Q9NZF1 115 aa11.73□□□□□ -0.53
CLK1-211ENST00000481641 NDUFS6O75380 124 aaKnown RBP11.72□□□□□ -0.53
CLK1-211ENST00000481641 MRAP2Q96G30 205 aa11.72□□□□□ -0.53
CLK1-211ENST00000481641 V9GYV3 84 aa11.72□□□□□ -0.53
CLK1-211ENST00000481641 PHOX2AO14813 284 aa11.71□□□□□ -0.53
CLK1-211ENST00000481641 NUP35Q8NFH5 326 aa11.71□□□□□ -0.53
CLK1-211ENST00000481641 CDC42SE2Q9NRR3 84 aa11.7□□□□□ -0.54
CLK1-211ENST00000481641 A0A096LNI7 61 aa11.69□□□□□ -0.54
CLK1-211ENST00000481641 TRBV27A0A0K0K1C4 114 aa11.69□□□□□ -0.54
CLK1-211ENST00000481641 A0A1B0GVG6 124 aa11.69□□□□□ -0.54
CLK1-211ENST00000481641 MT1HL1P0DM35 61 aa11.69□□□□□ -0.54
CLK1-211ENST00000481641 ISOC2Q96AB3 205 aa11.69□□□□□ -0.54
CLK1-211ENST00000481641 C7orf77A4D0Y5 90 aa11.68□□□□□ -0.54
CLK1-211ENST00000481641 C9JQL5 133 aa11.68□□□□□ -0.54
CLK1-211ENST00000481641 RPL23P62829 140 aaKnown RBP11.68□□□□□ -0.54
CLK1-211ENST00000481641 RIGQ13278 110 aa11.68□□□□□ -0.54
CLK1-211ENST00000481641 Q6ZRU5 148 aa11.68□□□□□ -0.54
CLK1-211ENST00000481641 MRPL52Q86TS9 123 aaKnown RBP11.68□□□□□ -0.54
CLK1-211ENST00000481641 ZNF664Q8N3J9 261 aa11.68□□□□□ -0.54
CLK1-211ENST00000481641 STPG4Q8N801 248 aa11.68□□□□□ -0.54
CLK1-211ENST00000481641 IGHV1-58A0A0C4DH39 117 aa11.67□□□□□ -0.54
CLK1-211ENST00000481641 SS18Q15532 418 aa11.67□□□□□ -0.54
CLK1-211ENST00000481641 TMEM241Q24JQ0 296 aa11.67□□□□□ -0.54
CLK1-211ENST00000481641 NRACQ8N912 160 aa11.67□□□□□ -0.54
CLK1-211ENST00000481641 PLA2G2DQ9UNK4 145 aa11.67□□□□□ -0.54
CLK1-211ENST00000481641 VCYO14598 125 aa11.66□□□□□ -0.54
CLK1-211ENST00000481641 FCER1GP30273 86 aa11.66□□□□□ -0.54
CLK1-211ENST00000481641 RNASE13Q5GAN3 156 aaKnown RBP11.66□□□□□ -0.54
CLK1-211ENST00000481641 C7orf33Q8WU49 177 aa11.66□□□□□ -0.54
CLK1-211ENST00000481641 SRSF3P84103 164 aaKnown RBP11.65□□□□□ -0.54
CLK1-211ENST00000481641 ADIRFQ15847 76 aa11.65□□□□□ -0.54
CLK1-211ENST00000481641 CD164L2Q6UWJ8 174 aa11.65□□□□□ -0.54
CLK1-211ENST00000481641 SUMO2P61956 95 aaKnown RBP11.64□□□□□ -0.55
CLK1-211ENST00000481641 MRPL51Q4U2R6 128 aaKnown RBP11.64□□□□□ -0.55
CLK1-211ENST00000481641 CARD19Q96LW7 228 aa11.64□□□□□ -0.55
CLK1-211ENST00000481641 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
CLK1-211ENST00000481641 FAM74A3Q4VXF1 159 aa11.63□□□□□ -0.55
CLK1-211ENST00000481641 UBE2D4Q9Y2X8 147 aa11.63□□□□□ -0.55
CLK1-211ENST00000481641 ZNF561-AS1K7EIQ3 104 aa11.62□□□□□ -0.55
CLK1-211ENST00000481641 CAMPP49913 170 aa11.62□□□□□ -0.55
CLK1-211ENST00000481641 SYCNQ0VAF6 134 aa11.62□□□□□ -0.55
CLK1-211ENST00000481641 FAM104BQ5XKR9 115 aa11.62□□□□□ -0.55
CLK1-211ENST00000481641 NAT8Q9UHE5 227 aa11.62□□□□□ -0.55
CLK1-211ENST00000481641 SMIM27A0A1W2PRY6 76 aa11.61□□□□□ -0.55
CLK1-211ENST00000481641 PRR3P79522 188 aaKnown RBP11.61□□□□□ -0.55
CLK1-211ENST00000481641 IGLV4-69A0A075B6H9 119 aa11.6□□□□□ -0.55
CLK1-211ENST00000481641 TRAV13-1A0A0B4J241 112 aa11.6□□□□□ -0.55
CLK1-211ENST00000481641 PPP1R17O96001 155 aa11.6□□□□□ -0.55
CLK1-211ENST00000481641 Q6ZUT4 128 aa11.6□□□□□ -0.55
CLK1-211ENST00000481641 KIR2DL4Q99706 377 aa11.6□□□□□ -0.55
CLK1-211ENST00000481641 TNXBP22105 4242 aa11.59□□□□□ -0.55
CLK1-211ENST00000481641 UBR4Q5T4S7 5183 aa11.59□□□□□ -0.55
CLK1-211ENST00000481641 C1orf196B1AJZ1 125 aa11.59□□□□□ -0.55
CLK1-211ENST00000481641 MALP21145 153 aa11.59□□□□□ -0.55
CLK1-211ENST00000481641 CSDC2Q9Y534 153 aaKnown RBP11.59□□□□□ -0.55
CLK1-211ENST00000481641 COX7A2LO14548 114 aa11.58□□□□□ -0.56
CLK1-211ENST00000481641 PPP1R2P9O14990 202 aa11.58□□□□□ -0.56
CLK1-211ENST00000481641 CKS2P33552 79 aa11.58□□□□□ -0.56
CLK1-211ENST00000481641 C5orf38Q86SI9 138 aa11.58□□□□□ -0.56
CLK1-211ENST00000481641 RPL39P62891 51 aaKnown RBP11.57□□□□□ -0.56
CLK1-211ENST00000481641 PEA15Q15121 130 aa11.57□□□□□ -0.56
CLK1-211ENST00000481641 MRPL54Q6P161 138 aaKnown RBP11.57□□□□□ -0.56
CLK1-211ENST00000481641 LINC00474Q9P2X8 69 aa11.57□□□□□ -0.56
CLK1-211ENST00000481641 GAGE2BQ13066 116 aa11.56□□□□□ -0.56
CLK1-211ENST00000481641 TRBV24-1A0A075B6N3 115 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 LINC00862A6NCI5 91 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 TNFRSF6BO95407 300 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 PTTG1IPP53801 180 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 SMAGPQ0VAQ4 97 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 FAM104AQ969W3 186 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 OPRPNQ99935 248 aaPredicted RBP11.55□□□□□ -0.56
CLK1-211ENST00000481641 C20orf78Q9BR46 151 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 TIMM21Q9BVV7 248 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 PKIGQ9Y2B9 76 aa11.55□□□□□ -0.56
CLK1-211ENST00000481641 D6R8Y8 96 aa11.54□□□□□ -0.56
CLK1-211ENST00000481641 ODF1Q14990 250 aa11.54□□□□□ -0.56
CLK1-211ENST00000481641 TMEM18Q96B42 140 aa11.54□□□□□ -0.56
CLK1-211ENST00000481641 CAMK2N2Q96S95 79 aa11.54□□□□□ -0.56
CLK1-211ENST00000481641 LOC107984640A0A0U1RRK4 108 aa11.53□□□□□ -0.56
CLK1-211ENST00000481641 A0A1B0GW15 77 aa11.53□□□□□ -0.56
CLK1-211ENST00000481641 NPYP01303 97 aa11.53□□□□□ -0.56
CLK1-211ENST00000481641 SMIM2Q9BVW6 85 aa11.53□□□□□ -0.56
CLK1-211ENST00000481641 A0A0J9YXV3 536 aa11.52□□□□□ -0.57
CLK1-211ENST00000481641 A0A1B0GXF2 115 aa11.52□□□□□ -0.57
CLK1-211ENST00000481641 A0A1W2PNN7 141 aa11.52□□□□□ -0.57
CLK1-211ENST00000481641 TCAPO15273 167 aa11.52□□□□□ -0.57
CLK1-211ENST00000481641 RPL32P62910 135 aaKnown RBP11.52□□□□□ -0.57
CLK1-211ENST00000481641 HBBP68871 147 aa11.52□□□□□ -0.57
CLK1-211ENST00000481641 LINC01600Q96MT4 127 aa11.51□□□□□ -0.57
CLK1-211ENST00000481641 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.5□□□□□ -0.57
CLK1-211ENST00000481641 SPAG11BQ08648 103 aa11.5□□□□□ -0.57
CLK1-211ENST00000481641 C2orf48Q96LS8 159 aa11.5□□□□□ -0.57
CLK1-211ENST00000481641 SMDT1Q9H4I9 107 aa11.5□□□□□ -0.57
CLK1-211ENST00000481641 F8W036 122 aa11.49□□□□□ -0.57
CLK1-211ENST00000481641 APOMO95445 188 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms