RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 PLA2G2DQ9UNK4 145 aa9.69□□□□□ -0.86
LIMS3-203ENST00000480744 TMEM218A2RU14 115 aa9.68□□□□□ -0.86
LIMS3-203ENST00000480744 PMCHP20382 165 aa9.68□□□□□ -0.86
LIMS3-203ENST00000480744 RPS10P46783 165 aaKnown RBP9.68□□□□□ -0.86
LIMS3-203ENST00000480744 COX6A2Q02221 97 aa9.68□□□□□ -0.86
LIMS3-203ENST00000480744 IGKV2-24A0A0C4DH68 120 aa9.67□□□□□ -0.86
LIMS3-203ENST00000480744 H7C423 109 aa9.67□□□□□ -0.86
LIMS3-203ENST00000480744 I3L3M4 83 aa9.67□□□□□ -0.86
LIMS3-203ENST00000480744 PNRC1Q12796 327 aaPredicted RBP9.67□□□□□ -0.86
LIMS3-203ENST00000480744 TMEM101Q96IK0 257 aa9.67□□□□□ -0.86
LIMS3-203ENST00000480744 BTF3L4Q96K17 158 aa9.67□□□□□ -0.86
LIMS3-203ENST00000480744 XCL1P47992 114 aa9.66□□□□□ -0.86
LIMS3-203ENST00000480744 MAJINQ3KP22 176 aa9.66□□□□□ -0.86
LIMS3-203ENST00000480744 AMN1Q8IY45 258 aa9.66□□□□□ -0.86
LIMS3-203ENST00000480744 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
LIMS3-203ENST00000480744 ST20Q9HBF5 79 aa9.66□□□□□ -0.86
LIMS3-203ENST00000480744 A0A1B0GXF2 115 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 PHOX2AO14813 284 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 ZNF25P17030 456 aaPredicted RBP9.65□□□□□ -0.86
LIMS3-203ENST00000480744 FOXI1Q12951 378 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 RIGQ13278 110 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 OR5A1Q8NGJ0 315 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 PRSS3P2Q8NHM4 247 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 C7orf33Q8WU49 177 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 TMEM242Q9NWH2 141 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 PLAC8Q9NZF1 115 aa9.65□□□□□ -0.86
LIMS3-203ENST00000480744 GVQW2A0A096LPI5 108 aaPredicted RBP9.64□□□□□ -0.87
LIMS3-203ENST00000480744 TRBV6-5A0A0K0K1A5 114 aa9.64□□□□□ -0.87
LIMS3-203ENST00000480744 F8W036 122 aa9.64□□□□□ -0.87
LIMS3-203ENST00000480744 RAB4AP20338 218 aa9.64□□□□□ -0.87
LIMS3-203ENST00000480744 MRPL54Q6P161 138 aaKnown RBP9.64□□□□□ -0.87
LIMS3-203ENST00000480744 Q6ZRU5 148 aa9.64□□□□□ -0.87
LIMS3-203ENST00000480744 SMKR1H3BMG3 65 aa9.63□□□□□ -0.87
LIMS3-203ENST00000480744 PPP1R2P9O14990 202 aa9.63□□□□□ -0.87
LIMS3-203ENST00000480744 CCL25O15444 150 aa9.63□□□□□ -0.87
LIMS3-203ENST00000480744 TSHBP01222 138 aa9.63□□□□□ -0.87
LIMS3-203ENST00000480744 MRAP2Q96G30 205 aa9.63□□□□□ -0.87
LIMS3-203ENST00000480744 SEC11CQ9BY50 192 aa9.63□□□□□ -0.87
LIMS3-203ENST00000480744 LINC00959A0A1B0GUT2 108 aa9.62□□□□□ -0.87
LIMS3-203ENST00000480744 ESDP10768 282 aa9.62□□□□□ -0.87
LIMS3-203ENST00000480744 CAMPP49913 170 aa9.62□□□□□ -0.87
LIMS3-203ENST00000480744 C10orf91Q5T1B1 145 aa9.62□□□□□ -0.87
LIMS3-203ENST00000480744 STPG4Q8N801 248 aa9.62□□□□□ -0.87
LIMS3-203ENST00000480744 ANAPC16Q96DE5 110 aa9.62□□□□□ -0.87
LIMS3-203ENST00000480744 LINC00526Q96FQ7 95 aa9.62□□□□□ -0.87
LIMS3-203ENST00000480744 A0A096LNI7 61 aa9.61□□□□□ -0.87
LIMS3-203ENST00000480744 MT-ND4LP03901 98 aa9.61□□□□□ -0.87
LIMS3-203ENST00000480744 MT1HL1P0DM35 61 aa9.61□□□□□ -0.87
LIMS3-203ENST00000480744 HBBP68871 147 aa9.61□□□□□ -0.87
LIMS3-203ENST00000480744 SS18Q15532 418 aa9.61□□□□□ -0.87
LIMS3-203ENST00000480744 UBR4Q5T4S7 5183 aa9.61□□□□□ -0.87
LIMS3-203ENST00000480744 IGHV1-58A0A0C4DH39 117 aa9.6□□□□□ -0.87
LIMS3-203ENST00000480744 MRPL51Q4U2R6 128 aaKnown RBP9.6□□□□□ -0.87
LIMS3-203ENST00000480744 FAM104BQ5XKR9 115 aa9.6□□□□□ -0.87
LIMS3-203ENST00000480744 NRACQ8N912 160 aa9.6□□□□□ -0.87
LIMS3-203ENST00000480744 C7orf77A4D0Y5 90 aa9.59□□□□□ -0.87
LIMS3-203ENST00000480744 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
LIMS3-203ENST00000480744 CARD19Q96LW7 228 aa9.59□□□□□ -0.87
LIMS3-203ENST00000480744 CARHSP1Q9Y2V2 147 aaKnown RBP9.59□□□□□ -0.87
LIMS3-203ENST00000480744 TRBV27A0A0K0K1C4 114 aa9.58□□□□□ -0.88
LIMS3-203ENST00000480744 A0A1B0GW15 77 aa9.58□□□□□ -0.88
LIMS3-203ENST00000480744 FCER1GP30273 86 aa9.58□□□□□ -0.88
LIMS3-203ENST00000480744 MRPL52Q86TS9 123 aaKnown RBP9.58□□□□□ -0.88
LIMS3-203ENST00000480744 ZNF664Q8N3J9 261 aa9.58□□□□□ -0.88
LIMS3-203ENST00000480744 CDC42SE2Q9NRR3 84 aa9.58□□□□□ -0.88
LIMS3-203ENST00000480744 PKIGQ9Y2B9 76 aa9.58□□□□□ -0.88
LIMS3-203ENST00000480744 ZNF561-AS1K7EIQ3 104 aa9.57□□□□□ -0.88
LIMS3-203ENST00000480744 PRR3P79522 188 aaKnown RBP9.57□□□□□ -0.88
LIMS3-203ENST00000480744 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
LIMS3-203ENST00000480744 ATP5L2Q7Z4Y8 100 aa9.57□□□□□ -0.88
LIMS3-203ENST00000480744 VCYO14598 125 aa9.56□□□□□ -0.88
LIMS3-203ENST00000480744 SYCNQ0VAF6 134 aa9.56□□□□□ -0.88
LIMS3-203ENST00000480744 LINC00474Q9P2X8 69 aa9.56□□□□□ -0.88
LIMS3-203ENST00000480744 MALP21145 153 aa9.55□□□□□ -0.88
LIMS3-203ENST00000480744 RNASE13Q5GAN3 156 aaKnown RBP9.55□□□□□ -0.88
LIMS3-203ENST00000480744 D6R8Y8 96 aa9.54□□□□□ -0.88
LIMS3-203ENST00000480744 S100A8P05109 93 aa9.54□□□□□ -0.88
LIMS3-203ENST00000480744 SUMO2P61956 95 aaKnown RBP9.54□□□□□ -0.88
LIMS3-203ENST00000480744 KIR2DL4Q99706 377 aa9.54□□□□□ -0.88
LIMS3-203ENST00000480744 CTDSP1Q9GZU7 261 aa9.54□□□□□ -0.88
LIMS3-203ENST00000480744 C1orf196B1AJZ1 125 aa9.53□□□□□ -0.88
LIMS3-203ENST00000480744 COX7A2LO14548 114 aa9.53□□□□□ -0.88
LIMS3-203ENST00000480744 PPP1R17O96001 155 aa9.53□□□□□ -0.88
LIMS3-203ENST00000480744 NPYP01303 97 aa9.53□□□□□ -0.88
LIMS3-203ENST00000480744 SMAGPQ0VAQ4 97 aa9.53□□□□□ -0.88
LIMS3-203ENST00000480744 IMMP2LQ96T52 175 aa9.53□□□□□ -0.88
LIMS3-203ENST00000480744 IGLV4-69A0A075B6H9 119 aa9.52□□□□□ -0.89
LIMS3-203ENST00000480744 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.89
LIMS3-203ENST00000480744 CKS2P33552 79 aa9.52□□□□□ -0.89
LIMS3-203ENST00000480744 GAGE2BQ13066 116 aa9.52□□□□□ -0.89
LIMS3-203ENST00000480744 UBE2D4Q9Y2X8 147 aa9.52□□□□□ -0.89
LIMS3-203ENST00000480744 TRBV24-1A0A075B6N3 115 aa9.51□□□□□ -0.89
LIMS3-203ENST00000480744 TNFRSF6BO95407 300 aa9.51□□□□□ -0.89
LIMS3-203ENST00000480744 RHEBQ15382 184 aa9.51□□□□□ -0.89
LIMS3-203ENST00000480744 TMEM136Q6ZRR5 245 aa9.51□□□□□ -0.89
LIMS3-203ENST00000480744 LOC107984640A0A0U1RRK4 108 aa9.5□□□□□ -0.89
LIMS3-203ENST00000480744 PTTG1IPP53801 180 aa9.5□□□□□ -0.89
LIMS3-203ENST00000480744 Q6ZUT4 128 aa9.5□□□□□ -0.89
LIMS3-203ENST00000480744 C5orf38Q86SI9 138 aa9.5□□□□□ -0.89
LIMS3-203ENST00000480744 CAMK2N2Q96S95 79 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms