RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 PHOX2AO14813 284 aa4.53□□□□□ -1.68
COL17A1-205ENST00000480127 ADIRFQ15847 76 aa4.53□□□□□ -1.68
COL17A1-205ENST00000480127 CT83Q5H943 113 aa4.53□□□□□ -1.68
COL17A1-205ENST00000480127 TSKUQ8WUA8 353 aa4.53□□□□□ -1.68
COL17A1-205ENST00000480127 CARD19Q96LW7 228 aa4.53□□□□□ -1.68
COL17A1-205ENST00000480127 CNFNQ9BYD5 112 aa4.53□□□□□ -1.68
COL17A1-205ENST00000480127 PKHD1L1Q86WI1 4243 aa4.53□□□□□ -1.68
COL17A1-205ENST00000480127 TRAV13-1A0A0B4J241 112 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 COX7A2LO14548 114 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 VCYO14598 125 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 APOMO95445 188 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 CAMPP49913 170 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 FAM231DQ6ZW35 169 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 C15orf56Q8N910 161 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 SPACA4Q8TDM5 124 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 NAT8BQ9UHF3 227 aa4.52□□□□□ -1.69
COL17A1-205ENST00000480127 LINC00959A0A1B0GUT2 108 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 C1orf196B1AJZ1 125 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 SMKR1H3BMG3 65 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 PANO1I0J062 215 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 PPP1R2P9O14990 202 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 S100A8P05109 93 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 RPL18AQ02543 176 aaKnown RBP4.51□□□□□ -1.69
COL17A1-205ENST00000480127 SYCNQ0VAF6 134 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 GAGE2BQ13066 116 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 TMEM241Q24JQ0 296 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 KRTAP26-1Q6PEX3 210 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 Q6ZRU5 148 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 LINC01551Q86U37 167 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 AMN1Q8IY45 258 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 ZNF664Q8N3J9 261 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 PRSS3P2Q8NHM4 247 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 LINC00526Q96FQ7 95 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 FAM210AQ96ND0 272 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 CAMK2N2Q96S95 79 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 TMEM191AQ9H0A3 160 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 OSTCQ9NRP0 149 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 LRP2P98164 4655 aa4.51□□□□□ -1.69
COL17A1-205ENST00000480127 GVQW2A0A096LPI5 108 aaPredicted RBP4.5□□□□□ -1.69
COL17A1-205ENST00000480127 F8W036 122 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 TCAPO15273 167 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 TSHBP01222 138 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 RAB5AP20339 215 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 CKS2P33552 79 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 FOXI1Q12951 378 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 PEA15Q15121 130 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 FAM74A3Q4VXF1 159 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 RNASE13Q5GAN3 156 aaKnown RBP4.5□□□□□ -1.69
COL17A1-205ENST00000480127 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 CD164L2Q6UWJ8 174 aa4.5□□□□□ -1.69
COL17A1-205ENST00000480127 A0A096LNI7 61 aa4.49□□□□□ -1.69
COL17A1-205ENST00000480127 TRBV6-5A0A0K0K1A5 114 aa4.49□□□□□ -1.69
COL17A1-205ENST00000480127 LOC107984640A0A0U1RRK4 108 aa4.49□□□□□ -1.69
COL17A1-205ENST00000480127 FAM231BA6NCW3 169 aa4.49□□□□□ -1.69
COL17A1-205ENST00000480127 RAB4AP20338 218 aa4.49□□□□□ -1.69
COL17A1-205ENST00000480127 SUMO2P61956 95 aaKnown RBP4.49□□□□□ -1.69
COL17A1-205ENST00000480127 NAT8Q9UHE5 227 aa4.49□□□□□ -1.69
COL17A1-205ENST00000480127 IGLV4-69A0A075B6H9 119 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 TRBV27A0A0K0K1C4 114 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 A0A1B0GW15 77 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 MT-ND6P03923 174 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 SLPIP03973 132 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 SPAG11BQ08648 103 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 MRPL54Q6P161 138 aaKnown RBP4.48□□□□□ -1.69
COL17A1-205ENST00000480127 C5orf38Q86SI9 138 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 NUP35Q8NFH5 326 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 CDC42SE2Q9NRR3 84 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 PLAC8Q9NZF1 115 aa4.48□□□□□ -1.69
COL17A1-205ENST00000480127 TGIF2-C20orf24A0A0A6YYL0 155 aa4.47□□□□□ -1.69
COL17A1-205ENST00000480127 IFITM10A6NMD0 228 aa4.47□□□□□ -1.69
COL17A1-205ENST00000480127 GAS8-AS1O95177 125 aa4.47□□□□□ -1.69
COL17A1-205ENST00000480127 SRP19P09132 144 aaKnown RBP4.47□□□□□ -1.69
COL17A1-205ENST00000480127 HBBP68871 147 aa4.47□□□□□ -1.69
COL17A1-205ENST00000480127 PRR3P79522 188 aaKnown RBP4.47□□□□□ -1.69
COL17A1-205ENST00000480127 CIRBPQ14011 172 aaKnown RBP4.47□□□□□ -1.69
COL17A1-205ENST00000480127 ODF1Q14990 250 aa4.47□□□□□ -1.69
COL17A1-205ENST00000480127 Q6ZRP5 223 aa4.47□□□□□ -1.69
COL17A1-205ENST00000480127 MRPL52Q86TS9 123 aaKnown RBP4.47□□□□□ -1.69
COL17A1-205ENST00000480127 ORAOV1Q8WV07 137 aa4.47□□□□□ -1.69
COL17A1-205ENST00000480127 LINC00862A6NCI5 91 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 D6R8Y8 96 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 LCE2BO14633 110 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 ESDP10768 282 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 PTTG1IPP53801 180 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 POLR2KP53803 58 aaKnown RBP4.46□□□□□ -1.7
COL17A1-205ENST00000480127 RAB14P61106 215 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 RPL23P62829 140 aaKnown RBP4.46□□□□□ -1.7
COL17A1-205ENST00000480127 MRPL51Q4U2R6 128 aaKnown RBP4.46□□□□□ -1.7
COL17A1-205ENST00000480127 FAM104BQ5XKR9 115 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 Q6ZN92 141 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 Q6ZUT4 128 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 C20orf78Q9BR46 151 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 V9GYV3 84 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 TNXBP22105 4242 aa4.46□□□□□ -1.7
COL17A1-205ENST00000480127 NDUFA1O15239 70 aa4.45□□□□□ -1.7
COL17A1-205ENST00000480127 TNFRSF6BO95407 300 aa4.45□□□□□ -1.7
COL17A1-205ENST00000480127 PRSS2P07478 247 aa4.45□□□□□ -1.7
COL17A1-205ENST00000480127 IFI27P40305 119 aaPredicted RBP4.45□□□□□ -1.7
COL17A1-205ENST00000480127 IMMP2LQ96T52 175 aa4.45□□□□□ -1.7
COL17A1-205ENST00000480127 OPRPNQ99935 248 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms