RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 TRBV24-1A0A075B6N3 115 aa6.84□□□□□ -1.31
SP140-210ENST00000479539 PPP1R2P9O14990 202 aa6.84□□□□□ -1.31
SP140-210ENST00000479539 S100A8P05109 93 aa6.84□□□□□ -1.31
SP140-210ENST00000479539 SUMO2P61956 95 aaKnown RBP6.84□□□□□ -1.31
SP140-210ENST00000479539 HBBP68871 147 aa6.84□□□□□ -1.31
SP140-210ENST00000479539 PNRC1Q12796 327 aaPredicted RBP6.84□□□□□ -1.31
SP140-210ENST00000479539 RNASEKQ6P5S7 137 aaKnown RBP6.84□□□□□ -1.31
SP140-210ENST00000479539 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
SP140-210ENST00000479539 KRTAP4-12Q9BQ66 201 aa6.84□□□□□ -1.31
SP140-210ENST00000479539 IFITM2Q01629 132 aa6.83□□□□□ -1.32
SP140-210ENST00000479539 MRPL54Q6P161 138 aaKnown RBP6.83□□□□□ -1.32
SP140-210ENST00000479539 MRPL52Q86TS9 123 aaKnown RBP6.83□□□□□ -1.32
SP140-210ENST00000479539 C20orf78Q9BR46 151 aa6.83□□□□□ -1.32
SP140-210ENST00000479539 C7orf77A4D0Y5 90 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 GAGE12HA6NDE8 117 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 F8W036 122 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 CKS2P33552 79 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 RPL32P62910 135 aaKnown RBP6.82□□□□□ -1.32
SP140-210ENST00000479539 Q5VSD8 79 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 ATP5L2Q7Z4Y8 100 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 OR5A1Q8NGJ0 315 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 ANAPC16Q96DE5 110 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 TMEM101Q96IK0 257 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 BTF3L4Q96K17 158 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 CHAC1Q9BUX1 264 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 CDC42SE2Q9NRR3 84 aa6.82□□□□□ -1.32
SP140-210ENST00000479539 IGKV3OR2-268A0A0C4DH90 116 aa6.81□□□□□ -1.32
SP140-210ENST00000479539 MT-ND4LP03901 98 aa6.81□□□□□ -1.32
SP140-210ENST00000479539 FCER1GP30273 86 aa6.81□□□□□ -1.32
SP140-210ENST00000479539 CNBPP62633 177 aaKnown RBP6.81□□□□□ -1.32
SP140-210ENST00000479539 CHCHD10Q8WYQ3 142 aaPredicted RBP6.81□□□□□ -1.32
SP140-210ENST00000479539 KIR2DL4Q99706 377 aa6.81□□□□□ -1.32
SP140-210ENST00000479539 hDV102S1A0JD36 115 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 D6R8Y8 96 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 PHOX2AO14813 284 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 TNFRSF6BO95407 300 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 PPBPP02775 128 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 SLPIP03973 132 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 CFAP161Q6P656 301 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 UQCC3Q6UW78 93 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 ZNF664Q8N3J9 261 aa6.8□□□□□ -1.32
SP140-210ENST00000479539 CSDC2Q9Y534 153 aaKnown RBP6.8□□□□□ -1.32
SP140-210ENST00000479539 LINC00959A0A1B0GUT2 108 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 TMEM218A2RU14 115 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 TCAPO15273 167 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 FOXI1Q12951 378 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 C15orf56Q8N910 161 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 CIRBP-AS1Q8TBR5 109 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 UBE2D4Q9Y2X8 147 aa6.79□□□□□ -1.32
SP140-210ENST00000479539 NPYP01303 97 aa6.78□□□□□ -1.32
SP140-210ENST00000479539 SMAGPQ0VAQ4 97 aa6.78□□□□□ -1.32
SP140-210ENST00000479539 TMEM136Q6ZRR5 245 aa6.78□□□□□ -1.32
SP140-210ENST00000479539 ORMDL3Q8N138 153 aa6.78□□□□□ -1.32
SP140-210ENST00000479539 TIMM21Q9BVV7 248 aa6.78□□□□□ -1.32
SP140-210ENST00000479539 SMIM2Q9BVW6 85 aa6.78□□□□□ -1.32
SP140-210ENST00000479539 AP5S1Q9NUS5 200 aa6.78□□□□□ -1.32
SP140-210ENST00000479539 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.77□□□□□ -1.33
SP140-210ENST00000479539 CCL25O15444 150 aa6.77□□□□□ -1.33
SP140-210ENST00000479539 ADCYAP1P18509 176 aa6.77□□□□□ -1.33
SP140-210ENST00000479539 XCL1P47992 114 aa6.77□□□□□ -1.33
SP140-210ENST00000479539 TMEM18Q96B42 140 aa6.77□□□□□ -1.33
SP140-210ENST00000479539 IMMP2LQ96T52 175 aa6.77□□□□□ -1.33
SP140-210ENST00000479539 FLG2Q5D862 2391 aaPredicted RBP6.77□□□□□ -1.33
SP140-210ENST00000479539 SRRM2Q9UQ35 2752 aaKnown RBP6.77□□□□□ -1.33
SP140-210ENST00000479539 GVQW2A0A096LPI5 108 aaPredicted RBP6.76□□□□□ -1.33
SP140-210ENST00000479539 PRSS47A8MTI9 375 aa6.76□□□□□ -1.33
SP140-210ENST00000479539 SS18Q15532 418 aa6.76□□□□□ -1.33
SP140-210ENST00000479539 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
SP140-210ENST00000479539 PRELID3AQ96N28 172 aa6.76□□□□□ -1.33
SP140-210ENST00000479539 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
SP140-210ENST00000479539 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
SP140-210ENST00000479539 IGHV3-64A0A075B6Q5 118 aa6.75□□□□□ -1.33
SP140-210ENST00000479539 C1orf196B1AJZ1 125 aa6.75□□□□□ -1.33
SP140-210ENST00000479539 PLA2G1BP04054 148 aaKnown RBP6.75□□□□□ -1.33
SP140-210ENST00000479539 CIRBPQ14011 172 aaKnown RBP6.75□□□□□ -1.33
SP140-210ENST00000479539 HIGD2BQ4VC39 106 aa6.75□□□□□ -1.33
SP140-210ENST00000479539 FAM104AQ969W3 186 aa6.75□□□□□ -1.33
SP140-210ENST00000479539 SEC11CQ9BY50 192 aa6.75□□□□□ -1.33
SP140-210ENST00000479539 CTDSP1Q9GZU7 261 aa6.75□□□□□ -1.33
SP140-210ENST00000479539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.75□□□□□ -1.33
SP140-210ENST00000479539 IGHV1-58A0A0C4DH39 117 aa6.74□□□□□ -1.33
SP140-210ENST00000479539 PANO1I0J062 215 aa6.74□□□□□ -1.33
SP140-210ENST00000479539 RPL39P62891 51 aaKnown RBP6.74□□□□□ -1.33
SP140-210ENST00000479539 Q6ZUT4 128 aa6.74□□□□□ -1.33
SP140-210ENST00000479539 SPANXA1Q9NS26 97 aa6.74□□□□□ -1.33
SP140-210ENST00000479539 TRAV13-1A0A0B4J241 112 aa6.73□□□□□ -1.33
SP140-210ENST00000479539 RAB5AP20339 215 aa6.73□□□□□ -1.33
SP140-210ENST00000479539 KRTAP10-4P60372 401 aaPredicted RBP6.73□□□□□ -1.33
SP140-210ENST00000479539 MRPS36P82909 103 aaKnown RBP6.73□□□□□ -1.33
SP140-210ENST00000479539 RNASE13Q5GAN3 156 aaKnown RBP6.73□□□□□ -1.33
SP140-210ENST00000479539 COMMD7Q86VX2 200 aa6.73□□□□□ -1.33
SP140-210ENST00000479539 DMBT1Q9UGM3 2413 aaPredicted RBP6.72□□□□□ -1.33
SP140-210ENST00000479539 TRAV9-1A0A075B6T8 112 aa6.72□□□□□ -1.33
SP140-210ENST00000479539 KRTAP4-8A0A0G2JLE6 195 aa6.72□□□□□ -1.33
SP140-210ENST00000479539 C10orf91Q5T1B1 145 aa6.72□□□□□ -1.33
SP140-210ENST00000479539 KRTAP9-9Q9BYP9 154 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms