RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 CRYBB3P26998 211 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 S100A7P31151 101 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 G6PCP35575 357 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 ATP5G3P48201 142 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 HBBP68871 147 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 RHOGP84095 191 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 PSG4Q00888 419 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CEACAM16Q2WEN9 425 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 TMEM97Q5BJF2 176 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CENPWQ5EE01 88 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CT45A1Q5HYN5 189 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 LYRM7Q5U5X0 104 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 UNQ5815/PRO19632Q6UWF5 114 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 TMEM136Q6ZRR5 245 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 TCF23Q7RTU1 214 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 APRG1Q8IVJ8 170 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 OR10W1Q8NGF6 305 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 ZNRF2Q8NHG8 242 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 CT45A3Q8NHU0 189 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 SLC25A40Q8TBP6 338 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 TSKUQ8WUA8 353 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 H1FXQ92522 213 aaKnown RBP2.64□□□□□ -1.99
CCDC171-207ENST00000478913 SIGMAR1Q99720 223 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 LINC00470Q9BZP3 86 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 C11orf68Q9H3H3 251 aaKnown RBP2.64□□□□□ -1.99
CCDC171-207ENST00000478913 PRNDQ9UKY0 176 aa2.64□□□□□ -1.99
CCDC171-207ENST00000478913 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.63□□□□□ -1.99
CCDC171-207ENST00000478913 ODAMA1E959 279 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 C7orf71A4D174 169 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 H3BRM9 83 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 SYS1-DBNDD2H3BUS1 97 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 COX7A2P2O60397 106 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 SPINK4O60575 86 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 P01737 135 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 SMIM13P0DJ93 91 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 C8orf88P0DMB2 117 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 TCL1AP56279 114 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 UBE2L3P68036 154 aaKnown RBP2.63□□□□□ -1.99
CCDC171-207ENST00000478913 MT1HP80294 61 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 ERHP84090 104 aaKnown RBP2.63□□□□□ -1.99
CCDC171-207ENST00000478913 HSD52Q0P140 79 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 AMMECR1LQ6DCA0 310 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 FAM231DQ6ZW35 169 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 MRPL55Q7Z7F7 128 aaKnown RBP2.63□□□□□ -1.99
CCDC171-207ENST00000478913 OR11H2Q8NH07 326 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 OR10AG1Q8NH19 301 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 VSTM2AQ8TAG5 236 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 KLF14Q8TD94 323 aaPredicted RBP2.63□□□□□ -1.99
CCDC171-207ENST00000478913 LINC01600Q96MT4 127 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 SPANXA1Q9NS26 97 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 LINC00846Q9NV44 126 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 ZNF257Q9Y2Q1 563 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 V9GYV3 84 aa2.63□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1-6A0A0C4DH72 117 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 H0YJW9 148 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 K7EP34 96 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 NUPR1O60356 82 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 OR2H2O95918 312 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1D-33P01593 117 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1-33P01594 117 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 ZNF688P0C7X2 276 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 SYNJ2BPP57105 145 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 HSPE1P61604 102 aaKnown RBP2.62□□□□□ -1.99
CCDC171-207ENST00000478913 PRR3P79522 188 aaKnown RBP2.62□□□□□ -1.99
CCDC171-207ENST00000478913 PSG9Q00887 426 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 CIRBPQ14011 172 aaKnown RBP2.62□□□□□ -1.99
CCDC171-207ENST00000478913 MPV17L2Q567V2 206 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 BVES-AS1Q5T3Y7 98 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 MIC13Q5XKP0 118 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 Q6AWC8 147 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 SCXQ7RTU7 201 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 PDPNQ86YL7 162 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 ATOH7Q8N100 152 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 FAM19A2Q8N3H0 131 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 FER1L6-AS1Q8NA97 138 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.62□□□□□ -1.99
CCDC171-207ENST00000478913 OR2K2Q8NGT1 345 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 OR4A5Q8NH83 315 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 C18orf32Q8TCD1 76 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 FMC1Q96HJ9 113 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 DERL1Q9BUN8 251 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 RABAC1Q9UI14 185 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 JPT1Q9UK76 154 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 AMMECR1Q9Y4X0 333 aaPredicted RBP2.62□□□□□ -1.99
CCDC171-207ENST00000478913 SPCS1Q9Y6A9 102 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 S4R3C0 116 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 V9GYY9 64 aa2.62□□□□□ -1.99
CCDC171-207ENST00000478913 DSTQ03001 7570 aaKnown RBP2.62□□□□□ -1.99
CCDC171-207ENST00000478913 A0A087WTM6 91 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 MUC21A0A0G2JKD1 596 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 MUC21A0A140T8X8 626 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 M0R1W7 72 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 TAX1BP3O14907 124 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 CRXO43186 299 aaPredicted RBP2.61□□□□□ -1.99
CCDC171-207ENST00000478913 FSTL3O95633 263 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1-39P01597 117 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 ORM1P02763 201 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 IGKV1D-39P04432 117 aa2.61□□□□□ -1.99
CCDC171-207ENST00000478913 SLC25A5P05141 298 aaKnown RBP2.61□□□□□ -1.99
CCDC171-207ENST00000478913 IGLC1P0CG04 106 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms