RNA–Protein interactions for RNA: ENST00000478652.1

MCF2L2-210, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-210ENST00000478652 AMN1Q8IY45 258 aa13.8□□□□□ -0.2
MCF2L2-210ENST00000478652 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
MCF2L2-210ENST00000478652 BORCS7Q96B45 105 aa13.8□□□□□ -0.2
MCF2L2-210ENST00000478652 RAB4AP20338 218 aa13.79□□□□□ -0.2
MCF2L2-210ENST00000478652 BTF3L4Q96K17 158 aa13.79□□□□□ -0.2
MCF2L2-210ENST00000478652 EIF5A2Q9GZV4 153 aaKnown RBP13.79□□□□□ -0.2
MCF2L2-210ENST00000478652 SRP19P09132 144 aaKnown RBP13.78□□□□□ -0.2
MCF2L2-210ENST00000478652 MRAP2Q96G30 205 aa13.78□□□□□ -0.2
MCF2L2-210ENST00000478652 TMEM101Q96IK0 257 aa13.78□□□□□ -0.2
MCF2L2-210ENST00000478652 FAM210AQ96ND0 272 aa13.78□□□□□ -0.2
MCF2L2-210ENST00000478652 OSTCQ9NRP0 149 aa13.78□□□□□ -0.2
MCF2L2-210ENST00000478652 ZNF727A8MUV8 499 aa13.77□□□□□ -0.21
MCF2L2-210ENST00000478652 SMKR1H3BMG3 65 aa13.77□□□□□ -0.21
MCF2L2-210ENST00000478652 V9GYV3 84 aa13.77□□□□□ -0.21
MCF2L2-210ENST00000478652 STPG4Q8N801 248 aa13.76□□□□□ -0.21
MCF2L2-210ENST00000478652 CDC42SE2Q9NRR3 84 aa13.76□□□□□ -0.21
MCF2L2-210ENST00000478652 TRBV27A0A0K0K1C4 114 aa13.75□□□□□ -0.21
MCF2L2-210ENST00000478652 MRPL52Q86TS9 123 aaKnown RBP13.75□□□□□ -0.21
MCF2L2-210ENST00000478652 C7orf33Q8WU49 177 aa13.75□□□□□ -0.21
MCF2L2-210ENST00000478652 IGHV1-58A0A0C4DH39 117 aa13.74□□□□□ -0.21
MCF2L2-210ENST00000478652 C7orf77A4D0Y5 90 aa13.74□□□□□ -0.21
MCF2L2-210ENST00000478652 NUP35Q8NFH5 326 aa13.74□□□□□ -0.21
MCF2L2-210ENST00000478652 UBR4Q5T4S7 5183 aa13.73□□□□□ -0.21
MCF2L2-210ENST00000478652 PRR3P79522 188 aaKnown RBP13.73□□□□□ -0.21
MCF2L2-210ENST00000478652 ZNF664Q8N3J9 261 aa13.73□□□□□ -0.21
MCF2L2-210ENST00000478652 SS18Q15532 418 aa13.72□□□□□ -0.21
MCF2L2-210ENST00000478652 NRACQ8N912 160 aa13.72□□□□□ -0.21
MCF2L2-210ENST00000478652 ISOC2Q96AB3 205 aa13.72□□□□□ -0.21
MCF2L2-210ENST00000478652 CARD19Q96LW7 228 aa13.72□□□□□ -0.21
MCF2L2-210ENST00000478652 RNASE13Q5GAN3 156 aaKnown RBP13.71□□□□□ -0.21
MCF2L2-210ENST00000478652 CD164L2Q6UWJ8 174 aa13.71□□□□□ -0.21
MCF2L2-210ENST00000478652 TNXBP22105 4242 aa13.7□□□□□ -0.22
MCF2L2-210ENST00000478652 RIGQ13278 110 aa13.7□□□□□ -0.22
MCF2L2-210ENST00000478652 FCER1GP30273 86 aa13.68□□□□□ -0.22
MCF2L2-210ENST00000478652 SUMO2P61956 95 aaKnown RBP13.68□□□□□ -0.22
MCF2L2-210ENST00000478652 RPL23P62829 140 aaKnown RBP13.68□□□□□ -0.22
MCF2L2-210ENST00000478652 UBE2D4Q9Y2X8 147 aa13.68□□□□□ -0.22
MCF2L2-210ENST00000478652 C9JQL5 133 aa13.67□□□□□ -0.22
MCF2L2-210ENST00000478652 VCYO14598 125 aa13.67□□□□□ -0.22
MCF2L2-210ENST00000478652 SYCNQ0VAF6 134 aa13.67□□□□□ -0.22
MCF2L2-210ENST00000478652 MRPL51Q4U2R6 128 aaKnown RBP13.67□□□□□ -0.22
MCF2L2-210ENST00000478652 ZNF561-AS1K7EIQ3 104 aa13.66□□□□□ -0.22
MCF2L2-210ENST00000478652 TMEM241Q24JQ0 296 aa13.66□□□□□ -0.22
MCF2L2-210ENST00000478652 Q6ZUT4 128 aa13.66□□□□□ -0.22
MCF2L2-210ENST00000478652 CAMPP49913 170 aa13.65□□□□□ -0.22
MCF2L2-210ENST00000478652 ODF1Q14990 250 aa13.65□□□□□ -0.22
MCF2L2-210ENST00000478652 ADIRFQ15847 76 aa13.65□□□□□ -0.22
MCF2L2-210ENST00000478652 NAT8BQ9UHF3 227 aa13.65□□□□□ -0.22
MCF2L2-210ENST00000478652 IGLV4-69A0A075B6H9 119 aa13.64□□□□□ -0.23
MCF2L2-210ENST00000478652 A0A1B0GVG6 124 aa13.64□□□□□ -0.23
MCF2L2-210ENST00000478652 SRSF3P84103 164 aaKnown RBP13.64□□□□□ -0.23
MCF2L2-210ENST00000478652 FAM104BQ5XKR9 115 aa13.64□□□□□ -0.23
MCF2L2-210ENST00000478652 LINC00474Q9P2X8 69 aa13.64□□□□□ -0.23
MCF2L2-210ENST00000478652 CSDC2Q9Y534 153 aaKnown RBP13.64□□□□□ -0.23
MCF2L2-210ENST00000478652 FAM74A3Q4VXF1 159 aa13.63□□□□□ -0.23
MCF2L2-210ENST00000478652 TRAV13-1A0A0B4J241 112 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 SMIM27A0A1W2PRY6 76 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 C1orf196B1AJZ1 125 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 COX7A2LO14548 114 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 PPP1R17O96001 155 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 MALP21145 153 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 PTTG1IPP53801 180 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 LINC01600Q96MT4 127 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 KIR2DL4Q99706 377 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 PKIGQ9Y2B9 76 aa13.62□□□□□ -0.23
MCF2L2-210ENST00000478652 NAT8Q9UHE5 227 aa13.61□□□□□ -0.23
MCF2L2-210ENST00000478652 PPP1R2P9O14990 202 aa13.6□□□□□ -0.23
MCF2L2-210ENST00000478652 GAGE2BQ13066 116 aa13.6□□□□□ -0.23
MCF2L2-210ENST00000478652 C5orf38Q86SI9 138 aa13.6□□□□□ -0.23
MCF2L2-210ENST00000478652 FAM104AQ969W3 186 aa13.6□□□□□ -0.23
MCF2L2-210ENST00000478652 LOC107984640A0A0U1RRK4 108 aa13.59□□□□□ -0.23
MCF2L2-210ENST00000478652 RPL39P62891 51 aaKnown RBP13.59□□□□□ -0.23
MCF2L2-210ENST00000478652 A0A1W2PNN7 141 aa13.58□□□□□ -0.24
MCF2L2-210ENST00000478652 CAMK2N2Q96S95 79 aa13.58□□□□□ -0.24
MCF2L2-210ENST00000478652 TIMM21Q9BVV7 248 aa13.58□□□□□ -0.24
MCF2L2-210ENST00000478652 TRBV24-1A0A075B6N3 115 aa13.57□□□□□ -0.24
MCF2L2-210ENST00000478652 SMAGPQ0VAQ4 97 aa13.57□□□□□ -0.24
MCF2L2-210ENST00000478652 C20orf78Q9BR46 151 aa13.57□□□□□ -0.24
MCF2L2-210ENST00000478652 LINC00862A6NCI5 91 aa13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 TNFRSF6BO95407 300 aa13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 CKS2P33552 79 aa13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 SRSF9Q13242 221 aaKnown RBP eCLIP13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 MRPL54Q6P161 138 aaKnown RBP13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 SPINK6Q6UWN8 80 aa13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 Q6ZRP5 223 aa13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 OPRPNQ99935 248 aaPredicted RBP13.56□□□□□ -0.24
MCF2L2-210ENST00000478652 A0A0J9YXV3 536 aa13.55□□□□□ -0.24
MCF2L2-210ENST00000478652 NPYP01303 97 aa13.55□□□□□ -0.24
MCF2L2-210ENST00000478652 RPL32P62910 135 aaKnown RBP13.55□□□□□ -0.24
MCF2L2-210ENST00000478652 C2orf48Q96LS8 159 aa13.55□□□□□ -0.24
MCF2L2-210ENST00000478652 SMIM2Q9BVW6 85 aa13.55□□□□□ -0.24
MCF2L2-210ENST00000478652 D6R8Y8 96 aa13.54□□□□□ -0.24
MCF2L2-210ENST00000478652 APOMO95445 188 aa13.54□□□□□ -0.24
MCF2L2-210ENST00000478652 SPAG11BQ08648 103 aa13.54□□□□□ -0.24
MCF2L2-210ENST00000478652 TMEM18Q96B42 140 aa13.54□□□□□ -0.24
MCF2L2-210ENST00000478652 A0A1B0GW15 77 aa13.53□□□□□ -0.24
MCF2L2-210ENST00000478652 A0A1B0GXF2 115 aa13.53□□□□□ -0.24
MCF2L2-210ENST00000478652 RPL18AQ02543 176 aaKnown RBP13.52□□□□□ -0.25
MCF2L2-210ENST00000478652 PEA15Q15121 130 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms