RNA–Protein interactions for RNA: ENST00000477832.1

BCL3-208, Transcript of B cell CLL/lymphoma 3, human

TSL 3

Gene BCL3, Length 385 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCL3-208	ENST00000477832	SNAPIN	O95295	136 aa		11.34	□□□□□ -0.59
BCL3-208	ENST00000477832	PPP1R17	O96001	155 aa		11.34	□□□□□ -0.59
BCL3-208	ENST00000477832	RPS10	P46783	165 aa	Known RBP	11.34	□□□□□ -0.59
BCL3-208	ENST00000477832	MRPL51	Q4U2R6	128 aa	Known RBP	11.34	□□□□□ -0.59
BCL3-208	ENST00000477832	SVBP	Q8N300	66 aa		11.34	□□□□□ -0.59
BCL3-208	ENST00000477832	C9orf163	Q8N9P6	203 aa		11.34	□□□□□ -0.59
BCL3-208	ENST00000477832	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.33	□□□□□ -0.6
BCL3-208	ENST00000477832	TRAV9-1	A0A075B6T8	112 aa		11.33	□□□□□ -0.6
BCL3-208	ENST00000477832	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.33	□□□□□ -0.6
BCL3-208	ENST00000477832		J3QL48	77 aa		11.33	□□□□□ -0.6
BCL3-208	ENST00000477832	AMMECR1L	Q6DCA0	310 aa		11.33	□□□□□ -0.6
BCL3-208	ENST00000477832	TRBV27	A0A0K0K1C4	114 aa		11.32	□□□□□ -0.6
BCL3-208	ENST00000477832	SMKR1	H3BMG3	65 aa		11.32	□□□□□ -0.6
BCL3-208	ENST00000477832	TSHB	P01222	138 aa		11.32	□□□□□ -0.6
BCL3-208	ENST00000477832	CKS2	P33552	79 aa		11.32	□□□□□ -0.6
BCL3-208	ENST00000477832	POLR2K	P53803	58 aa	Known RBP	11.32	□□□□□ -0.6
BCL3-208	ENST00000477832	SLC7A5P1	Q8MH63	180 aa		11.32	□□□□□ -0.6
BCL3-208	ENST00000477832	FGF6	P10767	208 aa		11.31	□□□□□ -0.6
BCL3-208	ENST00000477832	RNASEK	Q6P5S7	137 aa	Known RBP	11.31	□□□□□ -0.6
BCL3-208	ENST00000477832	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.3	□□□□□ -0.6
BCL3-208	ENST00000477832	ESD	P10768	282 aa		11.3	□□□□□ -0.6
BCL3-208	ENST00000477832	ZNF25	P17030	456 aa	Predicted RBP	11.3	□□□□□ -0.6
BCL3-208	ENST00000477832	NRAC	Q8N912	160 aa		11.3	□□□□□ -0.6
BCL3-208	ENST00000477832	hDV102S1	A0JD36	115 aa		11.29	□□□□□ -0.6
BCL3-208	ENST00000477832		D6R8Y8	96 aa		11.29	□□□□□ -0.6
BCL3-208	ENST00000477832	PPBP	P02775	128 aa		11.29	□□□□□ -0.6
BCL3-208	ENST00000477832	KRTAP10-4	P60372	401 aa	Predicted RBP	11.29	□□□□□ -0.6
BCL3-208	ENST00000477832	SDIM1	Q6ZPB5	146 aa		11.29	□□□□□ -0.6
BCL3-208	ENST00000477832	VCY	O14598	125 aa		11.28	□□□□□ -0.6
BCL3-208	ENST00000477832	SUMO2	P61956	95 aa	Known RBP	11.28	□□□□□ -0.6
BCL3-208	ENST00000477832	CNBP	P62633	177 aa	Known RBP	11.28	□□□□□ -0.6
BCL3-208	ENST00000477832	TMEM136	Q6ZRR5	245 aa		11.27	□□□□□ -0.61
BCL3-208	ENST00000477832	ORMDL3	Q8N138	153 aa		11.27	□□□□□ -0.61
BCL3-208	ENST00000477832	TMEM101	Q96IK0	257 aa		11.27	□□□□□ -0.61
BCL3-208	ENST00000477832	AP5S1	Q9NUS5	200 aa		11.27	□□□□□ -0.61
BCL3-208	ENST00000477832	TRBV24-1	A0A075B6N3	115 aa		11.26	□□□□□ -0.61
BCL3-208	ENST00000477832	IGKV3OR2-268	A0A0C4DH90	116 aa		11.26	□□□□□ -0.61
BCL3-208	ENST00000477832	TNFRSF6B	O95407	300 aa		11.26	□□□□□ -0.61
BCL3-208	ENST00000477832	FCER1G	P30273	86 aa		11.26	□□□□□ -0.61
BCL3-208	ENST00000477832	MRPL52	Q86TS9	123 aa	Known RBP	11.26	□□□□□ -0.61
BCL3-208	ENST00000477832	C20orf78	Q9BR46	151 aa		11.26	□□□□□ -0.61
BCL3-208	ENST00000477832	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	11.26	□□□□□ -0.61
BCL3-208	ENST00000477832	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	11.25	□□□□□ -0.61
BCL3-208	ENST00000477832	PHOX2A	O14813	284 aa		11.25	□□□□□ -0.61
BCL3-208	ENST00000477832	COX19	Q49B96	90 aa		11.25	□□□□□ -0.61
BCL3-208	ENST00000477832	PRELID3A	Q96N28	172 aa		11.25	□□□□□ -0.61
BCL3-208	ENST00000477832	KIR2DL4	Q99706	377 aa		11.25	□□□□□ -0.61
BCL3-208	ENST00000477832	GAGE12H	A6NDE8	117 aa		11.24	□□□□□ -0.61
BCL3-208	ENST00000477832	CFAP161	Q6P656	301 aa		11.24	□□□□□ -0.61
BCL3-208	ENST00000477832	OR5A1	Q8NGJ0	315 aa		11.24	□□□□□ -0.61
BCL3-208	ENST00000477832	IGHV3-64	A0A075B6Q5	118 aa		11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	PANO1	I0J062	215 aa		11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	NPY	P01303	97 aa		11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	SLPI	P03973	132 aa		11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	RPL37A	P61513	92 aa	Known RBP	11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	RPL32	P62910	135 aa	Known RBP	11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	GNB1L	Q9BYB4	327 aa		11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	LAMTOR2	Q9Y2Q5	125 aa		11.23	□□□□□ -0.61
BCL3-208	ENST00000477832	CDC42SE2	Q9NRR3	84 aa		11.22	□□□□□ -0.61
BCL3-208	ENST00000477832	TCAP	O15273	167 aa		11.21	□□□□□ -0.61
BCL3-208	ENST00000477832	CIRBP	Q14011	172 aa	Known RBP	11.21	□□□□□ -0.61
BCL3-208	ENST00000477832	DPH3	Q96FX2	82 aa		11.21	□□□□□ -0.61
BCL3-208	ENST00000477832	SMIM2	Q9BVW6	85 aa		11.21	□□□□□ -0.61
BCL3-208	ENST00000477832	LINC00959	A0A1B0GUT2	108 aa		11.2	□□□□□ -0.62
BCL3-208	ENST00000477832	OXT	P01178	125 aa		11.2	□□□□□ -0.62
BCL3-208	ENST00000477832	MT-ND6	P03923	174 aa		11.2	□□□□□ -0.62
BCL3-208	ENST00000477832	SMAGP	Q0VAQ4	97 aa		11.2	□□□□□ -0.62
BCL3-208	ENST00000477832	ZNF664	Q8N3J9	261 aa		11.2	□□□□□ -0.62
BCL3-208	ENST00000477832	C15orf56	Q8N910	161 aa		11.2	□□□□□ -0.62
BCL3-208	ENST00000477832	CSDC2	Q9Y534	153 aa	Known RBP	11.2	□□□□□ -0.62
BCL3-208	ENST00000477832	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.19	□□□□□ -0.62
BCL3-208	ENST00000477832	FOXI1	Q12951	378 aa		11.19	□□□□□ -0.62
BCL3-208	ENST00000477832	KIAA1644	Q3SXP7	199 aa		11.19	□□□□□ -0.62
BCL3-208	ENST00000477832	MAP1LC3A	Q9H492	121 aa		11.19	□□□□□ -0.62
BCL3-208	ENST00000477832	UBE2D4	Q9Y2X8	147 aa		11.19	□□□□□ -0.62
BCL3-208	ENST00000477832	XCL1	P47992	114 aa		11.18	□□□□□ -0.62
BCL3-208	ENST00000477832	TMEM18	Q96B42	140 aa		11.18	□□□□□ -0.62
BCL3-208	ENST00000477832	LRP1	Q07954	4544 aa	Known RBP	11.18	□□□□□ -0.62
BCL3-208	ENST00000477832	LOC389332	A0A1B0GUA5	103 aa		11.17	□□□□□ -0.62
BCL3-208	ENST00000477832	PRSS47	A8MTI9	375 aa		11.17	□□□□□ -0.62
BCL3-208	ENST00000477832	CCL25	O15444	150 aa		11.17	□□□□□ -0.62
BCL3-208	ENST00000477832	FABP9	Q0Z7S8	132 aa		11.17	□□□□□ -0.62
BCL3-208	ENST00000477832	SS18	Q15532	418 aa		11.17	□□□□□ -0.62
BCL3-208	ENST00000477832	MRPL18	Q9H0U6	180 aa	Known RBP	11.17	□□□□□ -0.62
BCL3-208	ENST00000477832	RAB5A	P20339	215 aa		11.16	□□□□□ -0.62
BCL3-208	ENST00000477832	HIGD2B	Q4VC39	106 aa		11.16	□□□□□ -0.62
BCL3-208	ENST00000477832	TIMM21	Q9BVV7	248 aa		11.16	□□□□□ -0.62
BCL3-208	ENST00000477832	SMCO4	Q9NRQ5	59 aa		11.16	□□□□□ -0.62
BCL3-208	ENST00000477832		A0A087WYN8	130 aa		11.15	□□□□□ -0.62
BCL3-208	ENST00000477832	CHTF8	P0CG12	524 aa		11.15	□□□□□ -0.62
BCL3-208	ENST00000477832	SPACA4	Q8TDM5	124 aa		11.15	□□□□□ -0.62
BCL3-208	ENST00000477832	TRAPPC1	Q9Y5R8	145 aa		11.15	□□□□□ -0.62
BCL3-208	ENST00000477832	GVQW2	A0A096LPI5	108 aa	Predicted RBP	11.14	□□□□□ -0.63
BCL3-208	ENST00000477832	CD164L2	Q6UWJ8	174 aa		11.14	□□□□□ -0.63
BCL3-208	ENST00000477832	CBLN2	Q8IUK8	224 aa		11.14	□□□□□ -0.63
BCL3-208	ENST00000477832		Q8N8P6	123 aa		11.14	□□□□□ -0.63
BCL3-208	ENST00000477832	C1orf196	B1AJZ1	125 aa		11.13	□□□□□ -0.63
BCL3-208	ENST00000477832	HNRNPA3	P51991	378 aa	Known RBP	11.13	□□□□□ -0.63
BCL3-208	ENST00000477832	RPL39	P62891	51 aa	Known RBP	11.13	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms